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Results for Y56A3A.4

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.4 taf-12 3146 Y56A3A.4a, Y56A3A.4b.1, Y56A3A.4b.2 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001255144]

Genes with expression patterns similar to Y56A3A.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.4 taf-12 3146 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001255144]
2. C08B11.5 sap-49 10553 7.549 0.962 0.963 0.939 0.963 0.938 0.977 0.908 0.899 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
3. F33H1.4 F33H1.4 2447 7.548 0.938 0.946 0.959 0.946 0.966 0.960 0.924 0.909
4. K11D12.2 pqn-51 15951 7.547 0.970 0.958 0.959 0.958 0.938 0.966 0.907 0.891 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
5. Y116A8C.35 uaf-2 13808 7.536 0.954 0.951 0.974 0.951 0.946 0.927 0.898 0.935 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
6. Y71D11A.2 smr-1 4976 7.533 0.947 0.944 0.976 0.944 0.945 0.946 0.905 0.926 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
7. T20B12.2 tbp-1 9014 7.518 0.954 0.957 0.972 0.957 0.961 0.947 0.905 0.865 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
8. C52E4.6 cyl-1 6405 7.515 0.945 0.949 0.939 0.949 0.954 0.967 0.903 0.909 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
9. Y111B2A.18 rsp-3 43731 7.512 0.974 0.949 0.947 0.949 0.931 0.931 0.893 0.938 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
10. T10C6.4 srx-44 8454 7.509 0.967 0.937 0.952 0.937 0.939 0.939 0.941 0.897 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
11. T10F2.4 prp-19 11298 7.508 0.968 0.951 0.957 0.951 0.920 0.940 0.926 0.895 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
12. T17E9.2 nmt-1 8017 7.506 0.956 0.954 0.939 0.954 0.911 0.968 0.935 0.889 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
13. ZK742.1 xpo-1 20741 7.505 0.954 0.958 0.968 0.958 0.911 0.952 0.886 0.918 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
14. K02F3.11 rnp-5 6205 7.504 0.947 0.943 0.944 0.943 0.949 0.970 0.894 0.914 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
15. ZK652.1 snr-5 5993 7.498 0.948 0.946 0.938 0.946 0.914 0.968 0.913 0.925 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
16. C09G4.3 cks-1 17852 7.495 0.959 0.934 0.958 0.934 0.950 0.952 0.914 0.894 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
17. C34E10.5 prmt-5 12277 7.493 0.952 0.959 0.951 0.959 0.919 0.971 0.881 0.901 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
18. F42A6.7 hrp-1 28201 7.489 0.965 0.937 0.956 0.937 0.931 0.941 0.892 0.930 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
19. ZC395.8 ztf-8 5521 7.488 0.908 0.953 0.967 0.953 0.953 0.933 0.916 0.905 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
20. C18D11.4 rsp-8 18308 7.486 0.967 0.950 0.951 0.950 0.932 0.932 0.930 0.874 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
21. F26F4.10 rars-1 9971 7.485 0.949 0.945 0.946 0.945 0.925 0.956 0.914 0.905 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
22. F58B6.3 par-2 3914 7.476 0.978 0.950 0.974 0.950 0.920 0.924 0.926 0.854
23. Y73B6BL.33 hrpf-2 4443 7.476 0.946 0.962 0.966 0.962 0.917 0.934 0.903 0.886 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
24. C36B1.3 rpb-3 4442 7.474 0.943 0.938 0.943 0.938 0.947 0.960 0.923 0.882 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
25. F46A9.4 skr-2 16831 7.474 0.966 0.944 0.955 0.944 0.927 0.940 0.906 0.892 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
26. F19B6.2 ufd-1 15357 7.472 0.944 0.964 0.949 0.964 0.914 0.923 0.908 0.906 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
27. T21D12.3 pqbp-1.1 5755 7.471 0.930 0.947 0.939 0.947 0.923 0.964 0.918 0.903 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
28. D1054.14 prp-38 6504 7.469 0.944 0.943 0.941 0.943 0.950 0.970 0.919 0.859 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
29. Y102A5A.1 cand-1 11808 7.468 0.931 0.947 0.960 0.947 0.920 0.938 0.905 0.920 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
30. ZK1058.4 ccdc-47 8879 7.468 0.960 0.957 0.929 0.957 0.911 0.957 0.893 0.904 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
31. Y110A7A.8 prp-31 4436 7.468 0.952 0.970 0.917 0.970 0.943 0.965 0.861 0.890 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
32. Y47G6A.20 rnp-6 5542 7.465 0.971 0.939 0.910 0.939 0.952 0.974 0.848 0.932 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
33. F10G8.3 rae-1 7542 7.465 0.948 0.937 0.937 0.937 0.939 0.954 0.885 0.928 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
34. F53F10.5 npp-11 3378 7.462 0.953 0.946 0.974 0.946 0.905 0.948 0.920 0.870 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
35. T12D8.2 drr-2 16208 7.461 0.952 0.961 0.953 0.961 0.920 0.940 0.871 0.903 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
36. T09A5.7 T09A5.7 5907 7.459 0.926 0.958 0.888 0.958 0.939 0.954 0.931 0.905
37. T12G3.5 mrpl-51 5192 7.459 0.963 0.941 0.933 0.941 0.939 0.957 0.869 0.916 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
38. Y54E5A.4 npp-4 6288 7.457 0.958 0.951 0.952 0.951 0.894 0.969 0.895 0.887 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
39. EEED8.7 rsp-4 13043 7.457 0.950 0.961 0.968 0.961 0.876 0.921 0.912 0.908 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
40. F28H1.3 aars-2 13537 7.454 0.962 0.957 0.948 0.957 0.898 0.947 0.886 0.899 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
41. ZK616.6 perm-3 16186 7.453 0.973 0.952 0.935 0.952 0.913 0.973 0.904 0.851 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
42. F32H2.4 thoc-3 3861 7.452 0.934 0.947 0.958 0.947 0.946 0.955 0.883 0.882 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
43. T12E12.4 drp-1 7694 7.449 0.952 0.934 0.965 0.934 0.943 0.936 0.895 0.890 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
44. B0464.9 B0464.9 2997 7.448 0.919 0.958 0.909 0.958 0.966 0.958 0.896 0.884 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
45. Y105E8A.17 ekl-4 4732 7.447 0.932 0.956 0.954 0.956 0.934 0.968 0.871 0.876
46. F56F3.1 ifet-1 25772 7.447 0.939 0.930 0.920 0.930 0.931 0.976 0.906 0.915 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
47. C48E7.3 lpd-2 10330 7.446 0.972 0.963 0.953 0.963 0.936 0.951 0.836 0.872 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
48. C53D5.6 imb-3 28921 7.443 0.934 0.955 0.941 0.955 0.934 0.928 0.895 0.901 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
49. F28B3.8 imb-1 7515 7.442 0.915 0.957 0.936 0.957 0.907 0.954 0.884 0.932 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
50. C47B2.4 pbs-2 19805 7.442 0.944 0.961 0.966 0.961 0.910 0.888 0.919 0.893 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
51. F01G4.3 skih-2 3353 7.442 0.882 0.941 0.977 0.941 0.946 0.940 0.912 0.903 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
52. F56A8.6 cpf-2 2730 7.441 0.975 0.931 0.943 0.931 0.945 0.957 0.873 0.886 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
53. F56D1.7 daz-1 23684 7.441 0.939 0.964 0.951 0.964 0.921 0.945 0.867 0.890 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
54. Y34D9A.1 mrpl-38 5291 7.441 0.931 0.948 0.960 0.948 0.920 0.958 0.872 0.904 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
55. F32A5.7 lsm-4 3785 7.44 0.967 0.945 0.938 0.945 0.922 0.948 0.883 0.892 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
56. T12D8.3 acbp-5 6816 7.439 0.935 0.947 0.961 0.947 0.920 0.943 0.913 0.873 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
57. Y38A8.2 pbs-3 18117 7.438 0.963 0.928 0.957 0.928 0.925 0.929 0.915 0.893 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
58. W02B12.3 rsp-1 9235 7.438 0.973 0.947 0.963 0.947 0.870 0.959 0.877 0.902 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
59. F13G3.4 dylt-1 21345 7.438 0.962 0.944 0.957 0.944 0.916 0.929 0.912 0.874 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
60. Y54E5B.3 let-49 2437 7.436 0.930 0.952 0.919 0.952 0.949 0.933 0.933 0.868 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
61. K08F11.3 cif-1 10218 7.436 0.961 0.952 0.911 0.952 0.921 0.944 0.886 0.909 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
62. T20F5.7 T20F5.7 5210 7.435 0.937 0.944 0.950 0.944 0.911 0.925 0.917 0.907
63. C36B1.4 pas-4 13140 7.434 0.941 0.965 0.958 0.965 0.920 0.917 0.868 0.900 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
64. R09B3.5 mag-1 7496 7.432 0.945 0.924 0.952 0.924 0.925 0.965 0.886 0.911 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
65. T27F7.3 eif-1 28176 7.432 0.951 0.950 0.916 0.950 0.953 0.907 0.917 0.888 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
66. F35G12.2 idhg-1 30065 7.431 0.957 0.958 0.945 0.958 0.919 0.928 0.894 0.872 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
67. ZK1127.4 ZK1127.4 3088 7.428 0.929 0.944 0.955 0.944 0.926 0.968 0.877 0.885 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
68. D2013.7 eif-3.F 21004 7.427 0.959 0.937 0.913 0.937 0.946 0.939 0.876 0.920 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
69. B0511.10 eif-3.E 10041 7.425 0.957 0.944 0.881 0.944 0.961 0.937 0.910 0.891 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
70. C08C3.4 cyk-7 12075 7.425 0.969 0.951 0.945 0.951 0.942 0.899 0.890 0.878 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
71. F32E10.6 cec-5 10643 7.425 0.954 0.949 0.955 0.949 0.914 0.958 0.851 0.895 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
72. C43E11.1 acin-1 7781 7.424 0.921 0.952 0.941 0.952 0.924 0.947 0.874 0.913 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
73. T04A8.10 sel-13 3109 7.424 0.950 0.931 0.952 0.931 0.917 0.965 0.869 0.909 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
74. F56B3.12 skr-18 6534 7.423 0.935 0.920 0.899 0.920 0.957 0.968 0.888 0.936 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
75. D2089.1 rsp-7 11057 7.422 0.936 0.942 0.966 0.942 0.940 0.946 0.891 0.859 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
76. F54C8.5 rheb-1 6358 7.422 0.949 0.920 0.966 0.920 0.954 0.951 0.906 0.856 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
77. F39B2.11 mtx-1 8526 7.421 0.955 0.943 0.937 0.943 0.903 0.927 0.917 0.896 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
78. Y38A8.3 ulp-2 7403 7.42 0.953 0.956 0.957 0.956 0.916 0.975 0.864 0.843 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
79. C25D7.8 otub-1 7941 7.417 0.960 0.932 0.949 0.932 0.913 0.952 0.913 0.866 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
80. T16G1.11 eif-3.K 14014 7.414 0.949 0.951 0.937 0.951 0.897 0.942 0.892 0.895 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
81. C41D11.2 eif-3.H 7520 7.414 0.934 0.936 0.926 0.936 0.951 0.963 0.869 0.899 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
82. Y48G8AL.6 smg-2 12561 7.413 0.946 0.934 0.920 0.934 0.907 0.951 0.882 0.939 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
83. T04A8.14 emb-5 11746 7.412 0.934 0.953 0.962 0.953 0.900 0.957 0.883 0.870 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
84. T05H4.6 erfa-1 12542 7.41 0.939 0.948 0.907 0.948 0.909 0.966 0.930 0.863 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
85. F49D11.1 prp-17 5338 7.41 0.926 0.935 0.967 0.935 0.930 0.950 0.903 0.864 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
86. F18E2.3 scc-3 13464 7.409 0.934 0.939 0.958 0.939 0.944 0.924 0.895 0.876 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
87. B0464.1 dars-1 12331 7.409 0.934 0.967 0.913 0.967 0.930 0.918 0.909 0.871 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
88. F33D4.7 emc-6 6534 7.408 0.938 0.929 0.972 0.929 0.952 0.932 0.874 0.882 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
89. C50C3.6 prp-8 19582 7.408 0.937 0.948 0.936 0.948 0.926 0.958 0.865 0.890 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
90. Y73F8A.34 tag-349 7966 7.408 0.953 0.910 0.950 0.910 0.923 0.963 0.927 0.872
91. Y40B1B.5 eif-3.J 15061 7.406 0.965 0.938 0.935 0.938 0.924 0.956 0.861 0.889 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
92. C33H5.12 rsp-6 23342 7.406 0.949 0.949 0.959 0.949 0.905 0.937 0.856 0.902 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
93. F33D4.5 mrpl-1 5337 7.405 0.921 0.941 0.949 0.941 0.919 0.951 0.868 0.915 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
94. B0205.7 kin-3 29775 7.405 0.950 0.945 0.922 0.945 0.895 0.934 0.921 0.893 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
95. F59B2.7 rab-6.1 10749 7.404 0.945 0.944 0.960 0.944 0.915 0.931 0.886 0.879 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
96. K01G5.4 ran-1 32379 7.403 0.963 0.944 0.941 0.944 0.893 0.956 0.846 0.916 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
97. H19N07.1 erfa-3 19869 7.402 0.964 0.955 0.961 0.955 0.904 0.946 0.842 0.875 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
98. T01G9.4 npp-2 5361 7.4 0.921 0.942 0.961 0.942 0.932 0.935 0.889 0.878 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
99. C18E9.6 tomm-40 13426 7.4 0.945 0.939 0.916 0.939 0.906 0.963 0.896 0.896 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
100. Y92H12BR.3 Y92H12BR.3 7585 7.399 0.944 0.894 0.939 0.894 0.961 0.936 0.942 0.889

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA