C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y73B6BL.33

Gene ID Gene Name Reads Transcripts Annotation
Y73B6BL.33 hrpf-2 4443 Y73B6BL.33a, Y73B6BL.33b HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]

Genes with expression patterns similar to Y73B6BL.33

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y73B6BL.33 hrpf-2 4443 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
2. C25A1.4 C25A1.4 15507 7.746 0.946 0.974 0.969 0.974 0.979 0.991 0.965 0.948
3. F53F10.5 npp-11 3378 7.719 0.955 0.952 0.979 0.952 0.985 0.960 0.973 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
4. C08B11.5 sap-49 10553 7.718 0.966 0.975 0.982 0.975 0.978 0.947 0.922 0.973 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
5. ZK742.1 xpo-1 20741 7.693 0.980 0.977 0.980 0.977 0.983 0.922 0.934 0.940 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
6. T28D9.2 rsp-5 6460 7.692 0.958 0.960 0.976 0.960 0.964 0.972 0.932 0.970 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
7. Y47D3A.26 smc-3 6256 7.69 0.915 0.969 0.969 0.969 0.961 0.964 0.971 0.972 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
8. F28H1.3 aars-2 13537 7.69 0.973 0.977 0.979 0.977 0.981 0.918 0.938 0.947 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
9. Y37D8A.9 mrg-1 14369 7.688 0.976 0.969 0.966 0.969 0.977 0.941 0.944 0.946 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
10. Y41D4B.19 npp-8 12992 7.685 0.972 0.960 0.975 0.960 0.969 0.966 0.935 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
11. C34E10.2 gop-2 5684 7.685 0.960 0.969 0.980 0.969 0.964 0.938 0.970 0.935 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
12. C48D1.2 ced-3 4123 7.68 0.952 0.945 0.970 0.945 0.961 0.987 0.970 0.950 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
13. R07E5.14 rnp-4 11659 7.676 0.968 0.963 0.972 0.963 0.966 0.942 0.961 0.941 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
14. ZK353.1 cyy-1 5745 7.673 0.964 0.962 0.961 0.962 0.956 0.968 0.938 0.962 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
15. W06H3.3 ctps-1 8363 7.665 0.922 0.969 0.968 0.969 0.969 0.949 0.968 0.951 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
16. F59A2.1 npp-9 34375 7.661 0.961 0.954 0.948 0.954 0.972 0.963 0.938 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
17. CC4.3 smu-1 4169 7.66 0.981 0.958 0.967 0.958 0.953 0.939 0.949 0.955 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
18. W08E3.1 snr-2 14849 7.66 0.952 0.959 0.982 0.959 0.935 0.964 0.971 0.938 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
19. F26F4.11 rpb-8 7601 7.659 0.924 0.961 0.961 0.961 0.968 0.959 0.975 0.950 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
20. K02F3.11 rnp-5 6205 7.656 0.978 0.961 0.953 0.961 0.957 0.971 0.921 0.954 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
21. R06F6.1 cdl-1 14167 7.655 0.952 0.963 0.948 0.963 0.972 0.958 0.955 0.944 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
22. C46A5.9 hcf-1 6295 7.649 0.964 0.956 0.976 0.956 0.980 0.971 0.929 0.917 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
23. T01E8.6 mrps-14 9328 7.648 0.903 0.971 0.952 0.971 0.973 0.968 0.961 0.949 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
24. F32A5.7 lsm-4 3785 7.645 0.975 0.956 0.963 0.956 0.979 0.944 0.958 0.914 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
25. F58E10.3 ddx-17 15107 7.643 0.963 0.968 0.979 0.968 0.964 0.928 0.931 0.942 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
26. C26E6.7 eri-9 8069 7.642 0.970 0.952 0.949 0.952 0.948 0.981 0.947 0.943 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
27. Y116A8C.42 snr-1 17062 7.639 0.922 0.962 0.977 0.962 0.964 0.926 0.954 0.972 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
28. K08F4.2 gtbp-1 25222 7.639 0.937 0.969 0.973 0.969 0.985 0.904 0.948 0.954 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
29. K08E7.1 eak-7 18960 7.638 0.964 0.964 0.966 0.964 0.974 0.923 0.925 0.958 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
30. T21B10.7 cct-2 13999 7.637 0.951 0.972 0.981 0.972 0.976 0.931 0.961 0.893 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
31. F23F1.1 nfyc-1 9983 7.637 0.964 0.957 0.965 0.957 0.988 0.946 0.908 0.952 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
32. C14B1.4 wdr-5.1 4424 7.635 0.944 0.975 0.968 0.975 0.948 0.915 0.958 0.952 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
33. T23H2.1 npp-12 12425 7.635 0.946 0.966 0.974 0.966 0.957 0.947 0.914 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
34. Y54E5A.4 npp-4 6288 7.634 0.941 0.956 0.974 0.956 0.974 0.946 0.935 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
35. R09B3.5 mag-1 7496 7.627 0.941 0.960 0.973 0.960 0.970 0.949 0.942 0.932 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
36. ZK1058.4 ccdc-47 8879 7.626 0.973 0.974 0.967 0.974 0.973 0.938 0.890 0.937 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
37. C08B6.9 aos-1 3892 7.625 0.963 0.943 0.966 0.943 0.962 0.939 0.958 0.951 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
38. T10B11.3 ztf-4 5161 7.624 0.950 0.953 0.983 0.953 0.961 0.937 0.952 0.935 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
39. T19B4.2 npp-7 13073 7.623 0.951 0.959 0.968 0.959 0.959 0.970 0.919 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
40. F43G9.5 cfim-1 9169 7.62 0.944 0.942 0.977 0.942 0.966 0.967 0.937 0.945 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
41. Y43F4B.4 npp-18 4780 7.619 0.948 0.950 0.965 0.950 0.984 0.943 0.932 0.947 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
42. T21B10.1 mrpl-50 14595 7.619 0.929 0.979 0.975 0.979 0.970 0.931 0.964 0.892 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
43. K11D12.2 pqn-51 15951 7.619 0.940 0.960 0.985 0.960 0.970 0.918 0.942 0.944 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
44. F01F1.8 cct-6 29460 7.617 0.960 0.987 0.982 0.987 0.961 0.931 0.921 0.888 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
45. H20J04.8 mog-2 3084 7.617 0.927 0.972 0.959 0.972 0.911 0.958 0.969 0.949 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
46. ZK863.6 dpy-30 16177 7.616 0.962 0.970 0.970 0.970 0.972 0.877 0.950 0.945 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
47. F36A2.1 cids-2 4551 7.615 0.978 0.969 0.952 0.969 0.952 0.899 0.922 0.974 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
48. K01G5.4 ran-1 32379 7.615 0.973 0.958 0.949 0.958 0.980 0.919 0.925 0.953 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
49. D2007.4 mrpl-18 2880 7.615 0.930 0.977 0.934 0.977 0.967 0.951 0.928 0.951 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
50. F32H2.4 thoc-3 3861 7.613 0.936 0.966 0.954 0.966 0.969 0.970 0.884 0.968 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
51. K07A1.12 lin-53 15817 7.61 0.976 0.958 0.973 0.958 0.971 0.937 0.940 0.897 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
52. Y37E3.3 rpb-10 4051 7.607 0.937 0.950 0.939 0.950 0.975 0.947 0.951 0.958 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
53. Y62E10A.11 mdt-9 5971 7.606 0.923 0.961 0.975 0.961 0.947 0.940 0.945 0.954 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
54. Y73B6BL.32 lsm-8 11002 7.605 0.906 0.953 0.977 0.953 0.970 0.944 0.945 0.957 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
55. T25G3.3 T25G3.3 7285 7.604 0.968 0.950 0.929 0.950 0.949 0.974 0.919 0.965
56. T06A10.4 lsy-13 7631 7.604 0.922 0.956 0.970 0.956 0.963 0.971 0.940 0.926
57. K12C11.2 smo-1 12784 7.603 0.963 0.969 0.915 0.969 0.979 0.895 0.956 0.957 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
58. C26D10.1 ran-3 11111 7.603 0.954 0.972 0.956 0.972 0.945 0.941 0.910 0.953 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
59. B0240.4 npp-22 5510 7.602 0.947 0.947 0.926 0.947 0.966 0.965 0.963 0.941 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
60. T12E12.2 cec-6 4758 7.602 0.884 0.944 0.981 0.944 0.982 0.952 0.951 0.964 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
61. F28B3.8 imb-1 7515 7.601 0.945 0.974 0.937 0.974 0.979 0.939 0.938 0.915 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
62. Y113G7B.5 fog-2 2753 7.6 0.952 0.927 0.952 0.927 0.974 0.961 0.939 0.968 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
63. ZK652.1 snr-5 5993 7.6 0.889 0.964 0.955 0.964 0.973 0.965 0.968 0.922 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
64. F52C9.7 mog-3 9880 7.6 0.980 0.939 0.961 0.939 0.975 0.947 0.920 0.939 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
65. ZK1127.4 ZK1127.4 3088 7.599 0.951 0.964 0.984 0.964 0.956 0.949 0.876 0.955 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
66. C27H5.3 fust-1 6978 7.597 0.945 0.968 0.945 0.968 0.961 0.949 0.943 0.918 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
67. C27B7.1 spr-2 14958 7.597 0.970 0.944 0.970 0.944 0.967 0.964 0.887 0.951 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
68. F32E10.6 cec-5 10643 7.596 0.980 0.977 0.973 0.977 0.961 0.937 0.851 0.940 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
69. F33E11.2 F33E11.2 5350 7.596 0.938 0.949 0.981 0.949 0.961 0.986 0.854 0.978
70. C16C10.4 C16C10.4 3439 7.595 0.916 0.947 0.959 0.947 0.985 0.959 0.939 0.943 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
71. Y71G12B.9 lin-65 7476 7.595 0.939 0.962 0.961 0.962 0.968 0.949 0.911 0.943 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
72. W01G7.3 rpb-11 7826 7.594 0.942 0.961 0.959 0.961 0.962 0.958 0.952 0.899 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
73. W06E11.4 sbds-1 6701 7.593 0.941 0.956 0.966 0.956 0.955 0.953 0.941 0.925 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
74. R12C12.2 ran-5 14517 7.593 0.960 0.949 0.966 0.949 0.963 0.945 0.913 0.948 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
75. W02B12.3 rsp-1 9235 7.592 0.968 0.965 0.980 0.965 0.970 0.933 0.872 0.939 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
76. K04G7.11 K04G7.11 6153 7.59 0.936 0.956 0.935 0.956 0.944 0.962 0.955 0.946 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
77. Y39G10AR.7 ekl-7 7072 7.588 0.904 0.928 0.981 0.928 0.980 0.959 0.949 0.959
78. H17B01.4 emc-1 9037 7.588 0.959 0.976 0.976 0.976 0.963 0.915 0.882 0.941 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
79. R53.2 dtmk-1 6821 7.588 0.952 0.961 0.958 0.961 0.980 0.969 0.856 0.951 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
80. R05D11.7 snrp-27 4159 7.588 0.970 0.957 0.964 0.957 0.964 0.918 0.920 0.938 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
81. F43G9.9 cpn-1 14505 7.587 0.969 0.964 0.980 0.964 0.943 0.917 0.914 0.936 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
82. C33H5.12 rsp-6 23342 7.586 0.983 0.968 0.972 0.968 0.977 0.903 0.885 0.930 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
83. T28D9.10 snr-3 9995 7.586 0.934 0.941 0.944 0.941 0.984 0.948 0.953 0.941 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
84. Y14H12B.2 Y14H12B.2 6496 7.585 0.965 0.952 0.979 0.952 0.936 0.949 0.928 0.924
85. Y56A3A.29 ung-1 1900 7.584 0.949 0.947 0.919 0.947 0.984 0.955 0.932 0.951 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
86. F56F3.1 ifet-1 25772 7.583 0.894 0.928 0.965 0.928 0.975 0.970 0.956 0.967 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
87. T21D12.3 pqbp-1.1 5755 7.583 0.961 0.969 0.950 0.969 0.937 0.923 0.950 0.924 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
88. F33H1.4 F33H1.4 2447 7.582 0.918 0.971 0.957 0.971 0.927 0.946 0.950 0.942
89. T02G5.9 kars-1 9763 7.58 0.893 0.964 0.936 0.964 0.982 0.946 0.949 0.946 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
90. C06A1.5 rpb-6 7515 7.58 0.947 0.958 0.962 0.958 0.977 0.927 0.940 0.911 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
91. W01A8.5 tofu-5 5678 7.579 0.959 0.962 0.960 0.962 0.950 0.936 0.973 0.877 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
92. T12D8.3 acbp-5 6816 7.579 0.976 0.971 0.952 0.971 0.940 0.888 0.925 0.956 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
93. Y23H5B.6 Y23H5B.6 5886 7.579 0.931 0.955 0.960 0.955 0.959 0.939 0.938 0.942
94. T10F2.4 prp-19 11298 7.578 0.957 0.977 0.971 0.977 0.964 0.889 0.898 0.945 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
95. F32H2.1 snpc-4 7581 7.577 0.948 0.954 0.956 0.954 0.965 0.924 0.931 0.945 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
96. F26B1.3 ima-2 18826 7.577 0.945 0.962 0.946 0.962 0.961 0.930 0.923 0.948 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
97. ZK381.1 him-3 4913 7.576 0.928 0.945 0.981 0.945 0.943 0.972 0.896 0.966 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
98. H27M09.2 rpb-5 4744 7.576 0.941 0.940 0.958 0.940 0.954 0.962 0.948 0.933 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
99. F59E12.11 sam-4 8179 7.575 0.940 0.937 0.979 0.937 0.971 0.918 0.961 0.932
100. C26E6.4 rpb-2 7053 7.575 0.925 0.968 0.963 0.968 0.971 0.931 0.913 0.936 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]

There are 2719 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA