C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T01G9.4

Gene ID Gene Name Reads Transcripts Annotation
T01G9.4 npp-2 5361 T01G9.4 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]

Genes with expression patterns similar to T01G9.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T01G9.4 npp-2 5361 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
2. F18E2.3 scc-3 13464 7.78 0.967 0.982 0.964 0.982 0.984 0.974 0.967 0.960 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
3. Y73F8A.34 tag-349 7966 7.754 0.963 0.967 0.962 0.967 0.984 0.977 0.961 0.973
4. Y55D9A.1 efa-6 10012 7.745 0.955 0.987 0.987 0.987 0.988 0.917 0.959 0.965 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
5. Y47G6A.20 rnp-6 5542 7.736 0.961 0.992 0.967 0.992 0.964 0.952 0.943 0.965 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
6. D1081.9 D1081.9 3792 7.733 0.965 0.979 0.957 0.979 0.981 0.970 0.963 0.939
7. F16D3.2 rsd-6 8211 7.727 0.951 0.983 0.973 0.983 0.985 0.953 0.937 0.962
8. F46F11.10 F46F11.10 968 7.722 0.956 0.950 0.976 0.950 0.981 0.978 0.983 0.948
9. T05F1.6 hsr-9 13312 7.717 0.951 0.979 0.975 0.979 0.964 0.952 0.943 0.974
10. F37A4.8 isw-1 9337 7.715 0.974 0.976 0.979 0.976 0.985 0.943 0.948 0.934 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
11. F58B6.3 par-2 3914 7.711 0.948 0.977 0.964 0.977 0.973 0.938 0.962 0.972
12. F01G4.3 skih-2 3353 7.709 0.964 0.971 0.968 0.971 0.967 0.957 0.927 0.984 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
13. F41E6.4 smk-1 22394 7.709 0.959 0.982 0.977 0.982 0.979 0.920 0.944 0.966 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
14. F35G12.8 smc-4 6202 7.704 0.955 0.979 0.966 0.979 0.982 0.937 0.947 0.959 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
15. C39E9.13 rfc-3 9443 7.702 0.937 0.980 0.956 0.980 0.968 0.976 0.979 0.926 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
16. K07C5.8 cash-1 10523 7.7 0.964 0.980 0.965 0.980 0.988 0.918 0.962 0.943 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
17. T20G5.11 rde-4 3966 7.699 0.957 0.956 0.986 0.956 0.961 0.972 0.948 0.963 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
18. T20H4.4 adr-2 5495 7.698 0.962 0.969 0.968 0.969 0.979 0.962 0.952 0.937 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
19. W03F9.5 ttb-1 8682 7.697 0.956 0.974 0.966 0.974 0.982 0.939 0.960 0.946 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
20. Y49E10.3 pph-4.2 8662 7.697 0.938 0.982 0.971 0.982 0.987 0.919 0.962 0.956 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
21. T20B12.2 tbp-1 9014 7.696 0.949 0.976 0.974 0.976 0.982 0.976 0.929 0.934 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
22. B0205.1 B0205.1 2403 7.696 0.944 0.961 0.964 0.961 0.954 0.978 0.977 0.957
23. C09G4.3 cks-1 17852 7.695 0.948 0.971 0.957 0.971 0.979 0.917 0.978 0.974 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
24. C26E6.5 fsn-1 6615 7.692 0.953 0.972 0.945 0.972 0.982 0.957 0.959 0.952 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
25. F28B3.7 him-1 18274 7.691 0.968 0.974 0.981 0.974 0.965 0.932 0.937 0.960 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
26. C50A2.2 cec-2 4169 7.69 0.955 0.990 0.963 0.990 0.985 0.948 0.928 0.931 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
27. D2089.1 rsp-7 11057 7.686 0.941 0.980 0.967 0.980 0.970 0.939 0.945 0.964 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
28. T04A8.14 emb-5 11746 7.686 0.976 0.981 0.969 0.981 0.957 0.923 0.947 0.952 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
29. C29E4.2 kle-2 5527 7.685 0.942 0.979 0.949 0.979 0.978 0.957 0.916 0.985 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
30. T23G11.7 T23G11.7 10001 7.684 0.963 0.984 0.951 0.984 0.985 0.982 0.883 0.952
31. W01B6.9 ndc-80 4670 7.684 0.934 0.975 0.948 0.975 0.982 0.962 0.951 0.957 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
32. F56D1.7 daz-1 23684 7.683 0.952 0.956 0.963 0.956 0.972 0.974 0.955 0.955 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
33. ZK328.5 npp-10 7652 7.682 0.952 0.965 0.947 0.965 0.977 0.967 0.952 0.957 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
34. R02D3.5 fnta-1 5258 7.681 0.945 0.970 0.970 0.970 0.972 0.942 0.960 0.952 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
35. T06D8.6 cchl-1 26292 7.681 0.963 0.973 0.958 0.973 0.971 0.926 0.954 0.963 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
36. T12E12.4 drp-1 7694 7.68 0.957 0.984 0.969 0.984 0.978 0.921 0.937 0.950 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
37. R06F6.5 npp-19 5067 7.68 0.960 0.975 0.966 0.975 0.965 0.950 0.943 0.946 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
38. ZC395.8 ztf-8 5521 7.679 0.968 0.960 0.974 0.960 0.974 0.971 0.935 0.937 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
39. T12D8.3 acbp-5 6816 7.678 0.933 0.974 0.973 0.974 0.963 0.937 0.962 0.962 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
40. Y54G9A.6 bub-3 9123 7.677 0.957 0.973 0.970 0.973 0.971 0.926 0.948 0.959 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
41. T23B12.4 natc-1 7759 7.676 0.954 0.978 0.954 0.978 0.981 0.929 0.967 0.935 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
42. D1054.14 prp-38 6504 7.676 0.929 0.980 0.955 0.980 0.975 0.955 0.932 0.970 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
43. Y113G7B.23 swsn-1 13766 7.675 0.967 0.976 0.957 0.976 0.972 0.894 0.960 0.973 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
44. F56A3.3 npp-6 5425 7.675 0.963 0.975 0.957 0.975 0.946 0.951 0.945 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
45. F12F6.3 rib-1 10524 7.675 0.940 0.973 0.961 0.973 0.976 0.933 0.943 0.976 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
46. C36B1.8 gls-1 8617 7.674 0.955 0.972 0.947 0.972 0.980 0.952 0.935 0.961 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
47. T06D10.2 chaf-1 8121 7.673 0.945 0.980 0.950 0.980 0.971 0.962 0.940 0.945 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_492440]
48. F56A8.6 cpf-2 2730 7.672 0.947 0.962 0.957 0.962 0.972 0.956 0.970 0.946 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
49. C18G1.5 hil-4 21692 7.672 0.944 0.976 0.962 0.976 0.943 0.957 0.948 0.966 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
50. E01A2.4 let-504 9788 7.671 0.928 0.979 0.953 0.979 0.951 0.970 0.937 0.974
51. F44A2.1 tag-153 16535 7.67 0.942 0.981 0.945 0.981 0.981 0.925 0.960 0.955
52. CD4.6 pas-6 18332 7.67 0.945 0.975 0.951 0.975 0.958 0.936 0.952 0.978 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
53. Y110A7A.8 prp-31 4436 7.668 0.950 0.968 0.963 0.968 0.969 0.957 0.945 0.948 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
54. M7.2 klc-1 4706 7.667 0.955 0.983 0.975 0.983 0.978 0.934 0.931 0.928 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
55. Y105E8A.17 ekl-4 4732 7.666 0.937 0.976 0.955 0.976 0.966 0.957 0.933 0.966
56. R07G3.3 npp-21 3792 7.666 0.902 0.962 0.940 0.962 0.982 0.966 0.972 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
57. F45E12.3 cul-4 3393 7.666 0.919 0.972 0.922 0.972 0.967 0.965 0.974 0.975 Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]
58. C08C3.4 cyk-7 12075 7.666 0.956 0.956 0.961 0.956 0.980 0.966 0.937 0.954 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
59. K08D12.1 pbs-1 21677 7.664 0.956 0.982 0.973 0.982 0.971 0.889 0.944 0.967 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
60. F59B2.7 rab-6.1 10749 7.663 0.933 0.945 0.965 0.945 0.977 0.969 0.957 0.972 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
61. ZK1127.4 ZK1127.4 3088 7.663 0.940 0.961 0.946 0.961 0.967 0.950 0.975 0.963 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
62. T20F5.7 T20F5.7 5210 7.661 0.963 0.948 0.974 0.948 0.974 0.951 0.975 0.928
63. C25A1.5 C25A1.5 9135 7.66 0.953 0.969 0.957 0.969 0.962 0.942 0.944 0.964
64. T09A5.8 cec-3 5813 7.659 0.921 0.986 0.941 0.986 0.942 0.976 0.951 0.956 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
65. T10F2.3 ulp-1 8351 7.659 0.910 0.979 0.959 0.979 0.980 0.941 0.959 0.952 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
66. R01H2.6 ubc-18 13394 7.658 0.932 0.977 0.954 0.977 0.970 0.953 0.944 0.951 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
67. F46B6.3 smg-4 4959 7.658 0.950 0.975 0.960 0.975 0.970 0.910 0.951 0.967 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
68. C36B1.3 rpb-3 4442 7.657 0.936 0.978 0.976 0.978 0.946 0.929 0.959 0.955 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
69. F32A5.1 ada-2 8343 7.655 0.958 0.976 0.975 0.976 0.982 0.944 0.925 0.919 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
70. R11A8.7 R11A8.7 15531 7.655 0.935 0.983 0.937 0.983 0.962 0.957 0.960 0.938 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
71. Y48G8AL.6 smg-2 12561 7.654 0.932 0.957 0.942 0.957 0.976 0.945 0.968 0.977 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
72. C13B4.2 usp-14 9000 7.654 0.944 0.974 0.970 0.974 0.986 0.896 0.938 0.972 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
73. Y49F6B.4 smu-2 4164 7.653 0.925 0.973 0.970 0.973 0.930 0.976 0.948 0.958 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
74. K12D12.1 top-2 18694 7.651 0.964 0.967 0.945 0.967 0.952 0.924 0.959 0.973 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
75. C39E9.12 C39E9.12 3588 7.651 0.954 0.963 0.964 0.963 0.968 0.953 0.934 0.952
76. F28D9.1 rsr-1 4282 7.65 0.949 0.979 0.945 0.979 0.960 0.951 0.942 0.945 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
77. C08B11.5 sap-49 10553 7.648 0.948 0.985 0.938 0.985 0.955 0.921 0.965 0.951 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
78. T26A5.6 T26A5.6 9194 7.647 0.912 0.981 0.959 0.981 0.955 0.942 0.957 0.960
79. C43E11.1 acin-1 7781 7.646 0.927 0.978 0.948 0.978 0.970 0.965 0.950 0.930 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
80. T21D12.3 pqbp-1.1 5755 7.646 0.937 0.973 0.969 0.973 0.971 0.956 0.949 0.918 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
81. C14B9.4 plk-1 18785 7.646 0.934 0.979 0.968 0.979 0.956 0.922 0.931 0.977 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
82. Y71D11A.2 smr-1 4976 7.645 0.957 0.968 0.977 0.968 0.961 0.895 0.971 0.948 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
83. EEED8.7 rsp-4 13043 7.644 0.938 0.954 0.947 0.954 0.973 0.956 0.964 0.958 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
84. T10C6.4 srx-44 8454 7.644 0.931 0.968 0.972 0.968 0.980 0.912 0.953 0.960 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
85. K04C2.4 brd-1 2439 7.643 0.963 0.968 0.973 0.968 0.940 0.955 0.907 0.969 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
86. T17E9.1 kin-18 8172 7.643 0.968 0.961 0.969 0.961 0.963 0.940 0.950 0.931 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
87. ZK381.4 pgl-1 20651 7.643 0.933 0.970 0.961 0.970 0.933 0.935 0.967 0.974 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
88. M106.1 mix-1 7950 7.643 0.906 0.982 0.947 0.982 0.982 0.965 0.909 0.970 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
89. F57C2.6 spat-1 5615 7.642 0.935 0.977 0.950 0.977 0.978 0.938 0.953 0.934 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
90. F11A10.1 lex-1 13720 7.642 0.948 0.973 0.966 0.973 0.983 0.950 0.926 0.923 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
91. F46A9.4 skr-2 16831 7.641 0.949 0.934 0.952 0.934 0.968 0.962 0.971 0.971 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
92. T07F8.3 gld-3 9324 7.64 0.931 0.973 0.950 0.973 0.980 0.965 0.942 0.926 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
93. C50C3.6 prp-8 19582 7.637 0.954 0.950 0.952 0.950 0.962 0.925 0.962 0.982 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
94. ZK1098.8 mut-7 4940 7.637 0.937 0.970 0.976 0.970 0.966 0.922 0.947 0.949 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
95. Y61A9LA.8 sut-2 11388 7.636 0.947 0.960 0.966 0.960 0.971 0.946 0.931 0.955 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
96. F39H11.5 pbs-7 13631 7.636 0.912 0.973 0.961 0.973 0.974 0.907 0.973 0.963 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
97. B0334.5 B0334.5 4713 7.636 0.950 0.971 0.950 0.971 0.957 0.917 0.958 0.962
98. T05H10.2 apn-1 5628 7.636 0.963 0.991 0.976 0.991 0.968 0.948 0.960 0.839 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
99. T10F2.4 prp-19 11298 7.634 0.934 0.970 0.973 0.970 0.968 0.925 0.957 0.937 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
100. EEED8.5 mog-5 4698 7.633 0.900 0.971 0.964 0.971 0.968 0.963 0.951 0.945 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09530]

There are 2937 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA