C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for D1054.14

Gene ID Gene Name Reads Transcripts Annotation
D1054.14 prp-38 6504 D1054.14 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]

Genes with expression patterns similar to D1054.14

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D1054.14 prp-38 6504 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
2. C36B1.3 rpb-3 4442 7.783 0.965 0.982 0.957 0.982 0.981 0.992 0.945 0.979 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
3. Y73F8A.34 tag-349 7966 7.765 0.961 0.971 0.959 0.971 0.967 0.991 0.966 0.979
4. K02F3.11 rnp-5 6205 7.753 0.940 0.972 0.984 0.972 0.967 0.984 0.960 0.974 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
5. F22D6.3 nars-1 18624 7.732 0.955 0.984 0.971 0.984 0.980 0.967 0.908 0.983 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
6. F18E2.3 scc-3 13464 7.73 0.962 0.975 0.978 0.975 0.978 0.967 0.937 0.958 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
7. C08B11.6 arp-6 4646 7.724 0.985 0.963 0.961 0.963 0.981 0.975 0.934 0.962 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
8. F59B2.7 rab-6.1 10749 7.723 0.969 0.969 0.986 0.969 0.974 0.962 0.936 0.958 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
9. C02B10.5 C02B10.5 9171 7.72 0.973 0.962 0.968 0.962 0.957 0.984 0.926 0.988
10. Y65B4BL.2 deps-1 18277 7.718 0.934 0.989 0.966 0.989 0.968 0.969 0.921 0.982
11. T17E9.2 nmt-1 8017 7.712 0.958 0.971 0.941 0.971 0.975 0.980 0.951 0.965 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
12. C39E9.13 rfc-3 9443 7.712 0.946 0.977 0.955 0.977 0.984 0.954 0.954 0.965 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
13. Y113G7B.23 swsn-1 13766 7.711 0.948 0.979 0.978 0.979 0.975 0.950 0.943 0.959 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
14. D2089.1 rsp-7 11057 7.71 0.943 0.981 0.971 0.981 0.979 0.973 0.899 0.983 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
15. T10C6.4 srx-44 8454 7.709 0.968 0.976 0.973 0.976 0.989 0.968 0.921 0.938 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
16. F28B3.7 him-1 18274 7.709 0.930 0.978 0.979 0.978 0.971 0.979 0.922 0.972 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
17. Y71F9B.16 dnj-30 4262 7.708 0.969 0.979 0.944 0.979 0.958 0.986 0.913 0.980 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
18. C08B11.5 sap-49 10553 7.706 0.954 0.978 0.950 0.978 0.974 0.985 0.936 0.951 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
19. ZK1127.4 ZK1127.4 3088 7.703 0.958 0.958 0.955 0.958 0.976 0.983 0.946 0.969 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
20. F46A9.4 skr-2 16831 7.7 0.961 0.947 0.978 0.947 0.977 0.979 0.946 0.965 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
21. W01G7.3 rpb-11 7826 7.697 0.978 0.973 0.970 0.973 0.959 0.978 0.913 0.953 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
22. Y17G7A.1 hmg-12 29989 7.697 0.970 0.985 0.958 0.985 0.930 0.952 0.945 0.972 HMG [Source:RefSeq peptide;Acc:NP_496544]
23. T10F2.4 prp-19 11298 7.694 0.969 0.964 0.972 0.964 0.976 0.957 0.939 0.953 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
24. C05C8.6 hpo-9 8263 7.69 0.951 0.985 0.974 0.985 0.964 0.977 0.895 0.959
25. ZK616.6 perm-3 16186 7.685 0.949 0.972 0.950 0.972 0.972 0.981 0.925 0.964 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
26. K01G5.4 ran-1 32379 7.684 0.973 0.984 0.957 0.984 0.944 0.958 0.912 0.972 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
27. D2030.6 prg-1 26751 7.684 0.912 0.965 0.975 0.965 0.970 0.988 0.940 0.969 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
28. F56D1.7 daz-1 23684 7.683 0.957 0.971 0.974 0.971 0.978 0.971 0.888 0.973 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
29. T04A8.14 emb-5 11746 7.682 0.933 0.983 0.976 0.983 0.968 0.968 0.914 0.957 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
30. Y71D11A.2 smr-1 4976 7.681 0.934 0.979 0.963 0.979 0.983 0.963 0.927 0.953 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
31. ZK856.12 hpo-40 7855 7.68 0.968 0.961 0.971 0.961 0.987 0.990 0.910 0.932
32. T20G5.11 rde-4 3966 7.68 0.968 0.956 0.965 0.956 0.975 0.981 0.907 0.972 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
33. T27F2.1 skp-1 3532 7.679 0.946 0.972 0.954 0.972 0.966 0.967 0.941 0.961 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
34. F58B6.3 par-2 3914 7.678 0.955 0.970 0.947 0.970 0.977 0.961 0.933 0.965
35. T01G9.4 npp-2 5361 7.676 0.929 0.980 0.955 0.980 0.975 0.955 0.932 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
36. C09G4.3 cks-1 17852 7.676 0.961 0.960 0.956 0.960 0.988 0.958 0.933 0.960 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
37. F10G8.3 rae-1 7542 7.674 0.965 0.981 0.981 0.981 0.977 0.981 0.867 0.941 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
38. Y54E5A.4 npp-4 6288 7.674 0.967 0.982 0.972 0.982 0.949 0.983 0.877 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
39. Y47G6A.20 rnp-6 5542 7.673 0.951 0.973 0.959 0.973 0.968 0.985 0.924 0.940 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
40. T12D8.3 acbp-5 6816 7.672 0.921 0.979 0.956 0.979 0.984 0.960 0.936 0.957 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
41. C18G1.5 hil-4 21692 7.671 0.926 0.975 0.968 0.975 0.959 0.969 0.926 0.973 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
42. C27B7.1 spr-2 14958 7.671 0.932 0.986 0.980 0.986 0.959 0.966 0.892 0.970 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
43. Y61A9LA.8 sut-2 11388 7.671 0.948 0.981 0.952 0.981 0.982 0.950 0.908 0.969 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
44. T06A10.4 lsy-13 7631 7.671 0.951 0.980 0.954 0.980 0.969 0.978 0.882 0.977
45. ZK1098.8 mut-7 4940 7.67 0.939 0.950 0.981 0.950 0.978 0.986 0.922 0.964 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
46. Y39G10AL.3 cdk-7 3495 7.669 0.965 0.984 0.947 0.984 0.935 0.979 0.950 0.925 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
47. F33H1.4 F33H1.4 2447 7.668 0.970 0.963 0.958 0.963 0.988 0.990 0.923 0.913
48. D1081.8 cdc-5L 8553 7.668 0.948 0.970 0.970 0.970 0.960 0.971 0.907 0.972 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
49. Y39G10AR.7 ekl-7 7072 7.668 0.939 0.971 0.947 0.971 0.963 0.975 0.919 0.983
50. Y54E5B.3 let-49 2437 7.668 0.974 0.966 0.968 0.966 0.960 0.955 0.904 0.975 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
51. C18G1.4 pgl-3 5291 7.666 0.952 0.970 0.945 0.970 0.977 0.969 0.908 0.975 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
52. W02B12.3 rsp-1 9235 7.666 0.976 0.963 0.977 0.963 0.930 0.969 0.915 0.973 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
53. T01G1.3 sec-31 10504 7.663 0.937 0.982 0.973 0.982 0.985 0.962 0.894 0.948 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
54. F42A6.7 hrp-1 28201 7.663 0.962 0.971 0.976 0.971 0.966 0.952 0.914 0.951 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
55. F56F3.1 ifet-1 25772 7.663 0.958 0.979 0.961 0.979 0.951 0.975 0.906 0.954 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
56. F23F1.1 nfyc-1 9983 7.662 0.957 0.974 0.973 0.974 0.920 0.980 0.897 0.987 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
57. C53D5.6 imb-3 28921 7.662 0.949 0.970 0.956 0.970 0.978 0.954 0.918 0.967 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
58. T21D12.3 pqbp-1.1 5755 7.661 0.950 0.956 0.984 0.956 0.970 0.984 0.924 0.937 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
59. Y105E8A.17 ekl-4 4732 7.66 0.951 0.981 0.946 0.981 0.966 0.966 0.911 0.958
60. C52E4.6 cyl-1 6405 7.66 0.955 0.974 0.979 0.974 0.976 0.986 0.874 0.942 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
61. C17E4.10 C17E4.10 7034 7.657 0.929 0.958 0.988 0.958 0.985 0.988 0.903 0.948
62. C48B4.11 C48B4.11 4384 7.657 0.954 0.987 0.954 0.987 0.943 0.955 0.921 0.956
63. C26E6.5 fsn-1 6615 7.654 0.939 0.971 0.975 0.971 0.952 0.953 0.941 0.952 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
64. C50C3.6 prp-8 19582 7.654 0.930 0.973 0.957 0.973 0.982 0.966 0.903 0.970 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
65. Y39G10AR.9 Y39G10AR.9 3972 7.653 0.931 0.982 0.932 0.982 0.983 0.964 0.935 0.944
66. T05F1.6 hsr-9 13312 7.653 0.938 0.985 0.982 0.985 0.971 0.945 0.884 0.963
67. F32H2.4 thoc-3 3861 7.653 0.954 0.963 0.975 0.963 0.981 0.976 0.879 0.962 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
68. F58A4.8 tbg-1 2839 7.652 0.951 0.971 0.929 0.971 0.989 0.991 0.886 0.964 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
69. F35G12.8 smc-4 6202 7.648 0.947 0.977 0.950 0.977 0.969 0.965 0.911 0.952 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
70. K11D12.2 pqn-51 15951 7.648 0.972 0.986 0.973 0.986 0.969 0.966 0.858 0.938 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
71. ZK328.5 npp-10 7652 7.647 0.903 0.979 0.957 0.979 0.974 0.955 0.974 0.926 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
72. C25D7.8 otub-1 7941 7.647 0.972 0.983 0.974 0.983 0.948 0.954 0.899 0.934 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
73. C15H11.4 dhs-22 21674 7.647 0.968 0.977 0.977 0.977 0.965 0.926 0.932 0.925 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
74. Y116A8C.35 uaf-2 13808 7.645 0.946 0.983 0.951 0.983 0.985 0.940 0.903 0.954 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
75. T07C4.10 T07C4.10 1563 7.641 0.966 0.953 0.968 0.953 0.957 0.961 0.921 0.962
76. T05H4.6 erfa-1 12542 7.64 0.958 0.955 0.939 0.955 0.978 0.967 0.941 0.947 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
77. F46B6.3 smg-4 4959 7.64 0.948 0.972 0.961 0.972 0.959 0.961 0.893 0.974 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
78. K03B4.2 K03B4.2 21796 7.64 0.962 0.983 0.937 0.983 0.967 0.971 0.898 0.939
79. F11A10.2 repo-1 2791 7.639 0.970 0.962 0.927 0.962 0.968 0.978 0.895 0.977 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
80. Y38A8.2 pbs-3 18117 7.637 0.973 0.982 0.981 0.982 0.960 0.928 0.912 0.919 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
81. C06E7.1 sams-3 26921 7.637 0.959 0.971 0.962 0.971 0.971 0.961 0.893 0.949 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
82. Y111B2A.18 rsp-3 43731 7.637 0.952 0.968 0.955 0.968 0.971 0.941 0.930 0.952 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
83. Y56A3A.20 ccf-1 18463 7.635 0.964 0.974 0.965 0.974 0.969 0.932 0.910 0.947 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
84. R02D3.5 fnta-1 5258 7.635 0.985 0.955 0.958 0.955 0.977 0.970 0.883 0.952 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
85. Y40B1B.5 eif-3.J 15061 7.635 0.945 0.970 0.955 0.970 0.980 0.956 0.921 0.938 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
86. T16G1.11 eif-3.K 14014 7.634 0.968 0.959 0.946 0.959 0.966 0.946 0.932 0.958 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
87. C34E10.5 prmt-5 12277 7.633 0.943 0.965 0.969 0.965 0.963 0.983 0.894 0.951 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
88. C18D11.4 rsp-8 18308 7.632 0.935 0.959 0.946 0.959 0.981 0.941 0.948 0.963 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
89. F32E10.6 cec-5 10643 7.631 0.953 0.948 0.965 0.948 0.964 0.973 0.901 0.979 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
90. C43E11.1 acin-1 7781 7.63 0.918 0.962 0.968 0.962 0.971 0.972 0.930 0.947 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
91. T01E8.6 mrps-14 9328 7.628 0.969 0.968 0.931 0.968 0.947 0.973 0.915 0.957 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
92. Y102A5A.1 cand-1 11808 7.628 0.951 0.977 0.960 0.977 0.974 0.935 0.919 0.935 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
93. F28D9.1 rsr-1 4282 7.627 0.906 0.984 0.952 0.984 0.973 0.986 0.889 0.953 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
94. Y38A8.3 ulp-2 7403 7.626 0.953 0.976 0.968 0.976 0.966 0.977 0.860 0.950 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
95. F58A4.3 hcp-3 8787 7.626 0.961 0.964 0.966 0.964 0.976 0.968 0.886 0.941 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
96. C08C3.4 cyk-7 12075 7.625 0.970 0.970 0.970 0.970 0.974 0.939 0.899 0.933 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
97. K12C11.2 smo-1 12784 7.625 0.962 0.945 0.943 0.945 0.950 0.968 0.935 0.977 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
98. ZK652.1 snr-5 5993 7.623 0.931 0.963 0.932 0.963 0.968 0.980 0.927 0.959 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
99. Y54E10A.9 vbh-1 28746 7.623 0.960 0.971 0.946 0.971 0.968 0.933 0.913 0.961 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
100. T24D1.4 tag-179 3757 7.622 0.945 0.974 0.942 0.974 0.979 0.978 0.875 0.955

There are 3175 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA