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Results for F56B3.12

Gene ID Gene Name Reads Transcripts Annotation
F56B3.12 skr-18 6534 F56B3.12 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]

Genes with expression patterns similar to F56B3.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56B3.12 skr-18 6534 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
2. F57B9.5 byn-1 58236 7.791 0.988 0.967 0.966 0.967 0.984 0.967 0.978 0.974 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
3. C53D5.6 imb-3 28921 7.751 0.964 0.970 0.974 0.970 0.986 0.957 0.961 0.969 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
4. K07A12.7 mrps-15 6325 7.738 0.968 0.978 0.953 0.978 0.975 0.946 0.974 0.966 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
5. Y65B4BR.5 icd-2 58321 7.736 0.973 0.950 0.961 0.950 0.976 0.974 0.969 0.983 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
6. F46A9.4 skr-2 16831 7.728 0.972 0.949 0.945 0.949 0.981 0.971 0.977 0.984 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
7. T12D8.2 drr-2 16208 7.724 0.951 0.960 0.964 0.960 0.965 0.965 0.978 0.981 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
8. Y54E2A.11 eif-3.B 13795 7.712 0.971 0.968 0.971 0.968 0.969 0.954 0.957 0.954 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
9. Y54E10A.9 vbh-1 28746 7.71 0.983 0.968 0.967 0.968 0.962 0.949 0.951 0.962 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
10. F19B6.2 ufd-1 15357 7.702 0.961 0.966 0.965 0.966 0.953 0.969 0.954 0.968 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
11. C27D11.1 egl-45 28282 7.701 0.947 0.958 0.978 0.958 0.967 0.953 0.963 0.977 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
12. C41D11.2 eif-3.H 7520 7.699 0.978 0.944 0.969 0.944 0.973 0.962 0.966 0.963 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
13. C26D10.2 hel-1 28697 7.697 0.970 0.961 0.974 0.961 0.943 0.946 0.977 0.965 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
14. F31D4.3 fkb-6 21313 7.696 0.965 0.972 0.974 0.972 0.948 0.955 0.934 0.976 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
15. D2013.7 eif-3.F 21004 7.693 0.974 0.962 0.971 0.962 0.970 0.939 0.955 0.960 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
16. T20H4.3 pars-1 8167 7.689 0.956 0.958 0.952 0.958 0.975 0.957 0.974 0.959 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
17. Y40B1B.5 eif-3.J 15061 7.688 0.957 0.969 0.968 0.969 0.969 0.953 0.964 0.939 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
18. K04G2.1 iftb-1 12590 7.687 0.956 0.966 0.973 0.966 0.975 0.944 0.962 0.945 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
19. ZC410.7 lpl-1 5101 7.686 0.964 0.934 0.961 0.934 0.978 0.980 0.964 0.971 LiPoate Ligase [Source:RefSeq peptide;Acc:NP_501580]
20. ZK381.4 pgl-1 20651 7.686 0.955 0.962 0.961 0.962 0.945 0.952 0.976 0.973 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
21. Y48G8AL.6 smg-2 12561 7.684 0.950 0.957 0.954 0.957 0.952 0.970 0.965 0.979 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
22. C08B11.5 sap-49 10553 7.673 0.954 0.944 0.968 0.944 0.973 0.974 0.973 0.943 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
23. T23D8.4 eif-3.C 15343 7.672 0.951 0.955 0.973 0.955 0.964 0.959 0.937 0.978 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
24. C06E7.1 sams-3 26921 7.671 0.957 0.958 0.949 0.958 0.973 0.958 0.952 0.966 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
25. F35G12.2 idhg-1 30065 7.669 0.976 0.956 0.975 0.956 0.962 0.957 0.948 0.939 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
26. C34E10.5 prmt-5 12277 7.669 0.954 0.961 0.965 0.961 0.956 0.970 0.963 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
27. T10F2.1 gars-1 7204 7.669 0.949 0.962 0.958 0.962 0.965 0.973 0.943 0.957 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
28. Y116A8C.35 uaf-2 13808 7.668 0.939 0.955 0.961 0.955 0.975 0.948 0.948 0.987 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
29. T21C9.12 scpl-4 14723 7.667 0.968 0.950 0.963 0.950 0.963 0.967 0.939 0.967 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
30. F56D1.7 daz-1 23684 7.665 0.949 0.952 0.934 0.952 0.970 0.980 0.967 0.961 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
31. T10F2.4 prp-19 11298 7.665 0.963 0.958 0.963 0.958 0.966 0.963 0.950 0.944 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
32. F22B5.9 fars-3 7209 7.661 0.983 0.961 0.943 0.961 0.960 0.941 0.965 0.947 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
33. T17E9.2 nmt-1 8017 7.66 0.969 0.956 0.953 0.956 0.962 0.966 0.944 0.954 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
34. ZK652.1 snr-5 5993 7.658 0.965 0.962 0.962 0.962 0.952 0.966 0.908 0.981 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
35. F39B2.10 dnj-12 35162 7.657 0.972 0.971 0.954 0.971 0.944 0.980 0.944 0.921 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
36. C56C10.8 icd-1 89788 7.656 0.936 0.967 0.975 0.967 0.953 0.940 0.965 0.953 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
37. T05H4.6 erfa-1 12542 7.655 0.974 0.959 0.942 0.959 0.957 0.979 0.968 0.917 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
38. H06H21.3 eif-1.A 40990 7.653 0.977 0.966 0.968 0.966 0.949 0.940 0.947 0.940 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
39. R13F6.10 cra-1 11610 7.653 0.946 0.975 0.960 0.975 0.958 0.959 0.935 0.945 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
40. Y39G10AR.9 Y39G10AR.9 3972 7.652 0.974 0.936 0.965 0.936 0.962 0.952 0.967 0.960
41. T02G5.9 kars-1 9763 7.652 0.962 0.950 0.977 0.950 0.952 0.951 0.961 0.949 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
42. F26F4.10 rars-1 9971 7.652 0.948 0.939 0.970 0.939 0.976 0.963 0.974 0.943 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
43. F22D6.3 nars-1 18624 7.651 0.938 0.954 0.968 0.954 0.972 0.955 0.968 0.942 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
44. T27F7.3 eif-1 28176 7.651 0.976 0.947 0.984 0.947 0.982 0.930 0.961 0.924 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
45. T12D8.8 hip-1 18283 7.65 0.926 0.953 0.973 0.953 0.968 0.951 0.962 0.964 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
46. C50C3.6 prp-8 19582 7.649 0.934 0.958 0.939 0.958 0.974 0.985 0.944 0.957 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
47. T08B2.9 fars-1 12650 7.648 0.981 0.960 0.951 0.960 0.956 0.955 0.972 0.913 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
48. F20D12.1 csr-1 16351 7.647 0.965 0.959 0.955 0.959 0.963 0.959 0.928 0.959 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
49. B0511.10 eif-3.E 10041 7.646 0.968 0.945 0.949 0.945 0.975 0.953 0.968 0.943 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
50. F42A6.7 hrp-1 28201 7.643 0.951 0.954 0.953 0.954 0.956 0.952 0.949 0.974 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
51. Y61A9LA.8 sut-2 11388 7.642 0.937 0.969 0.952 0.969 0.979 0.955 0.933 0.948 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
52. DY3.1 tin-13 5225 7.638 0.972 0.921 0.970 0.921 0.958 0.945 0.963 0.988 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
53. T06A10.4 lsy-13 7631 7.638 0.978 0.959 0.943 0.959 0.957 0.964 0.954 0.924
54. T01E8.6 mrps-14 9328 7.638 0.973 0.958 0.957 0.958 0.941 0.941 0.962 0.948 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
55. F10G8.3 rae-1 7542 7.636 0.966 0.946 0.961 0.946 0.977 0.967 0.919 0.954 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
56. C18E9.6 tomm-40 13426 7.635 0.974 0.949 0.932 0.949 0.948 0.963 0.959 0.961 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
57. K08F11.3 cif-1 10218 7.635 0.964 0.943 0.966 0.943 0.958 0.947 0.970 0.944 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
58. C08B11.6 arp-6 4646 7.632 0.940 0.957 0.935 0.957 0.966 0.990 0.972 0.915 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
59. T24C4.1 ucr-2.3 7057 7.632 0.963 0.947 0.947 0.947 0.967 0.949 0.950 0.962 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
60. Y111B2A.18 rsp-3 43731 7.631 0.934 0.942 0.951 0.942 0.969 0.944 0.984 0.965 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
61. F56F3.1 ifet-1 25772 7.629 0.954 0.952 0.938 0.952 0.952 0.971 0.958 0.952 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
62. C08C3.4 cyk-7 12075 7.627 0.951 0.956 0.958 0.956 0.975 0.952 0.914 0.965 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
63. B0205.7 kin-3 29775 7.625 0.980 0.943 0.978 0.943 0.946 0.965 0.932 0.938 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
64. W09C5.7 W09C5.7 2359 7.624 0.975 0.897 0.968 0.897 0.974 0.952 0.980 0.981
65. Y37E11AL.7 map-1 2499 7.624 0.962 0.941 0.908 0.941 0.971 0.959 0.978 0.964 Methionine aminopeptidase 1 [Source:RefSeq peptide;Acc:NP_500396]
66. ZK1127.4 ZK1127.4 3088 7.624 0.904 0.957 0.919 0.957 0.979 0.988 0.976 0.944 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
67. K03B4.2 K03B4.2 21796 7.623 0.972 0.927 0.953 0.927 0.955 0.971 0.968 0.950
68. Y39E4B.1 abce-1 4178 7.622 0.976 0.930 0.941 0.930 0.976 0.964 0.953 0.952 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]
69. ZK616.6 perm-3 16186 7.621 0.948 0.933 0.977 0.933 0.960 0.982 0.970 0.918 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
70. F45H11.3 hpo-35 8299 7.618 0.948 0.959 0.942 0.959 0.956 0.973 0.965 0.916
71. T16G1.11 eif-3.K 14014 7.618 0.967 0.952 0.959 0.952 0.953 0.940 0.954 0.941 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
72. T27E9.7 abcf-2 40273 7.616 0.980 0.967 0.957 0.967 0.961 0.895 0.955 0.934 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
73. T09A5.7 T09A5.7 5907 7.616 0.948 0.930 0.958 0.930 0.956 0.966 0.959 0.969
74. B0464.1 dars-1 12331 7.611 0.966 0.949 0.975 0.949 0.959 0.928 0.966 0.919 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
75. Y71H2AM.19 laf-1 9160 7.611 0.965 0.949 0.949 0.949 0.972 0.947 0.919 0.961 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
76. K10D2.3 cid-1 7175 7.61 0.935 0.971 0.927 0.971 0.972 0.948 0.918 0.968 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
77. C47D12.6 tars-1 23488 7.61 0.958 0.943 0.954 0.943 0.968 0.939 0.944 0.961 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
78. K04D7.2 mspn-1 48187 7.608 0.966 0.940 0.964 0.940 0.952 0.952 0.969 0.925 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
79. Y34D9A.1 mrpl-38 5291 7.605 0.945 0.958 0.937 0.958 0.962 0.965 0.955 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
80. C43E11.1 acin-1 7781 7.604 0.902 0.946 0.940 0.946 0.974 0.970 0.965 0.961 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
81. Y67D8C.5 eel-1 30623 7.603 0.956 0.968 0.954 0.968 0.946 0.926 0.934 0.951 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
82. C47B2.4 pbs-2 19805 7.602 0.968 0.968 0.925 0.968 0.958 0.928 0.918 0.969 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
83. F21C3.3 hint-1 7078 7.602 0.962 0.928 0.963 0.928 0.949 0.976 0.929 0.967 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
84. Y102A5A.1 cand-1 11808 7.602 0.963 0.938 0.944 0.938 0.952 0.954 0.939 0.974 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
85. C18D11.4 rsp-8 18308 7.6 0.944 0.943 0.953 0.943 0.968 0.963 0.960 0.926 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
86. D1054.14 prp-38 6504 7.599 0.949 0.957 0.919 0.957 0.977 0.983 0.916 0.941 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
87. C48E7.3 lpd-2 10330 7.599 0.945 0.941 0.938 0.941 0.970 0.979 0.950 0.935 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
88. K01G5.4 ran-1 32379 7.595 0.930 0.951 0.958 0.951 0.948 0.952 0.947 0.958 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
89. F35G12.10 asb-1 9077 7.593 0.961 0.962 0.961 0.962 0.941 0.918 0.942 0.946 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_497938]
90. T25D3.2 mrpl-28 4649 7.592 0.955 0.927 0.951 0.927 0.963 0.941 0.974 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
91. F39H11.5 pbs-7 13631 7.59 0.944 0.953 0.934 0.953 0.955 0.947 0.938 0.966 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
92. Y54E5A.4 npp-4 6288 7.589 0.961 0.958 0.922 0.958 0.947 0.968 0.940 0.935 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
93. Y47G6A.20 rnp-6 5542 7.587 0.928 0.941 0.916 0.941 0.972 0.981 0.939 0.969 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
94. T21G5.3 glh-1 16470 7.586 0.913 0.960 0.953 0.960 0.954 0.939 0.959 0.948 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
95. T01G9.6 kin-10 27360 7.586 0.971 0.958 0.970 0.958 0.962 0.937 0.903 0.927 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
96. D2089.1 rsp-7 11057 7.586 0.914 0.955 0.954 0.955 0.977 0.975 0.918 0.938 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
97. C09D4.5 rpl-19 56944 7.585 0.952 0.942 0.975 0.942 0.955 0.935 0.964 0.920 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
98. F22B7.5 dnj-10 7821 7.585 0.974 0.931 0.923 0.931 0.971 0.963 0.954 0.938 DnaJ homolog dnj-10 [Source:UniProtKB/Swiss-Prot;Acc:Q8TA83]
99. K11D12.2 pqn-51 15951 7.585 0.951 0.955 0.939 0.955 0.964 0.971 0.922 0.928 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
100. T06D8.6 cchl-1 26292 7.583 0.930 0.945 0.962 0.945 0.958 0.934 0.937 0.972 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA