C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F19B6.2

Gene ID Gene Name Reads Transcripts Annotation
F19B6.2 ufd-1 15357 F19B6.2a, F19B6.2b Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]

Genes with expression patterns similar to F19B6.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F19B6.2 ufd-1 15357 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
2. F44A2.1 tag-153 16535 7.757 0.977 0.977 0.963 0.977 0.973 0.973 0.952 0.965
3. F31D4.3 fkb-6 21313 7.742 0.978 0.984 0.964 0.984 0.947 0.954 0.942 0.989 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
4. Y48B6A.14 hmg-1.1 88723 7.733 0.951 0.964 0.974 0.964 0.967 0.972 0.959 0.982 HMG [Source:RefSeq peptide;Acc:NP_496970]
5. C47B2.4 pbs-2 19805 7.73 0.979 0.981 0.967 0.981 0.965 0.947 0.928 0.982 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
6. M117.2 par-5 64868 7.711 0.954 0.959 0.970 0.959 0.966 0.964 0.960 0.979 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
7. B0205.7 kin-3 29775 7.711 0.967 0.967 0.989 0.967 0.975 0.961 0.942 0.943 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
8. F39H11.5 pbs-7 13631 7.705 0.974 0.964 0.958 0.964 0.963 0.952 0.945 0.985 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
9. F56B3.12 skr-18 6534 7.702 0.961 0.966 0.965 0.966 0.953 0.969 0.954 0.968 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
10. Y92C3B.2 uaf-1 14981 7.696 0.985 0.975 0.965 0.975 0.949 0.935 0.922 0.990 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
11. Y54E10A.9 vbh-1 28746 7.692 0.968 0.977 0.970 0.977 0.977 0.946 0.919 0.958 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
12. T05F1.6 hsr-9 13312 7.689 0.969 0.980 0.956 0.980 0.978 0.976 0.920 0.930
13. F40G9.3 ubc-20 16785 7.688 0.967 0.972 0.989 0.972 0.963 0.948 0.917 0.960 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
14. Y65B4BR.5 icd-2 58321 7.685 0.942 0.951 0.972 0.951 0.982 0.967 0.947 0.973 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
15. CD4.6 pas-6 18332 7.676 0.975 0.970 0.947 0.970 0.972 0.955 0.914 0.973 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
16. Y54E2A.11 eif-3.B 13795 7.672 0.963 0.965 0.980 0.965 0.954 0.922 0.945 0.978 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
17. Y113G7B.23 swsn-1 13766 7.669 0.968 0.960 0.949 0.960 0.965 0.965 0.950 0.952 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
18. C09G4.3 cks-1 17852 7.662 0.960 0.945 0.941 0.945 0.979 0.963 0.966 0.963 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
19. ZK20.3 rad-23 35070 7.662 0.988 0.966 0.965 0.966 0.939 0.953 0.909 0.976
20. F39B2.2 uev-1 13597 7.662 0.966 0.954 0.969 0.954 0.970 0.931 0.960 0.958 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
21. F57B9.5 byn-1 58236 7.662 0.965 0.984 0.940 0.984 0.965 0.935 0.944 0.945 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
22. F35G12.2 idhg-1 30065 7.661 0.966 0.980 0.984 0.980 0.942 0.938 0.921 0.950 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
23. K08D12.1 pbs-1 21677 7.66 0.977 0.969 0.945 0.969 0.958 0.961 0.909 0.972 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
24. Y119D3B.15 dss-1 19116 7.658 0.959 0.954 0.983 0.954 0.957 0.954 0.920 0.977 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
25. Y102A5A.1 cand-1 11808 7.658 0.970 0.963 0.972 0.963 0.964 0.950 0.919 0.957 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
26. Y67D8C.5 eel-1 30623 7.654 0.950 0.967 0.970 0.967 0.965 0.949 0.943 0.943 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
27. C18D11.4 rsp-8 18308 7.649 0.961 0.972 0.984 0.972 0.974 0.952 0.943 0.891 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
28. Y111B2A.18 rsp-3 43731 7.648 0.973 0.967 0.962 0.967 0.979 0.942 0.937 0.921 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
29. C53D5.6 imb-3 28921 7.648 0.960 0.981 0.980 0.981 0.975 0.923 0.922 0.926 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
30. Y73B6BL.6 sqd-1 41708 7.648 0.958 0.974 0.980 0.974 0.975 0.938 0.917 0.932 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
31. F46A9.4 skr-2 16831 7.646 0.968 0.954 0.981 0.954 0.973 0.932 0.942 0.942 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
32. Y110A7A.14 pas-3 6831 7.645 0.974 0.957 0.942 0.957 0.951 0.923 0.967 0.974 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
33. T10C6.4 srx-44 8454 7.645 0.978 0.950 0.926 0.950 0.971 0.958 0.951 0.961 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
34. C02F5.9 pbs-6 20120 7.643 0.968 0.967 0.977 0.967 0.935 0.939 0.916 0.974 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
35. F39B2.10 dnj-12 35162 7.643 0.972 0.977 0.961 0.977 0.943 0.956 0.920 0.937 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
36. C08B11.5 sap-49 10553 7.642 0.970 0.979 0.990 0.979 0.972 0.935 0.929 0.888 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
37. EEED8.7 rsp-4 13043 7.641 0.949 0.952 0.948 0.952 0.970 0.945 0.974 0.951 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
38. B0464.5 spk-1 35112 7.64 0.966 0.972 0.959 0.972 0.957 0.954 0.916 0.944 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
39. K11D12.2 pqn-51 15951 7.64 0.974 0.980 0.975 0.980 0.970 0.951 0.915 0.895 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
40. C36B1.4 pas-4 13140 7.64 0.975 0.966 0.957 0.966 0.954 0.941 0.909 0.972 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
41. T05H4.6 erfa-1 12542 7.637 0.964 0.970 0.959 0.970 0.965 0.956 0.948 0.905 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
42. Y116A8C.35 uaf-2 13808 7.636 0.960 0.968 0.977 0.968 0.959 0.952 0.911 0.941 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
43. W05B10.1 his-74 21926 7.634 0.981 0.950 0.964 0.950 0.963 0.946 0.919 0.961 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
44. F26E4.1 sur-6 16191 7.631 0.938 0.969 0.950 0.969 0.973 0.960 0.927 0.945 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
45. F42A6.7 hrp-1 28201 7.628 0.980 0.969 0.982 0.969 0.954 0.937 0.910 0.927 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
46. F56D1.7 daz-1 23684 7.627 0.960 0.968 0.964 0.968 0.987 0.955 0.925 0.900 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
47. Y105E8A.17 ekl-4 4732 7.625 0.953 0.970 0.947 0.970 0.971 0.967 0.901 0.946
48. T12D8.6 mlc-5 19567 7.624 0.969 0.963 0.970 0.963 0.963 0.937 0.908 0.951 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
49. T01G9.6 kin-10 27360 7.623 0.943 0.972 0.982 0.972 0.967 0.926 0.911 0.950 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
50. C50C3.6 prp-8 19582 7.621 0.943 0.974 0.945 0.974 0.978 0.971 0.900 0.936 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
51. Y54G9A.6 bub-3 9123 7.621 0.953 0.962 0.946 0.962 0.971 0.933 0.953 0.941 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
52. C47D12.6 tars-1 23488 7.62 0.977 0.968 0.983 0.968 0.966 0.920 0.895 0.943 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
53. C27D11.1 egl-45 28282 7.619 0.935 0.949 0.965 0.949 0.961 0.936 0.946 0.978 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
54. T21E12.4 dhc-1 20370 7.618 0.974 0.969 0.959 0.969 0.959 0.935 0.894 0.959 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
55. Y38A8.2 pbs-3 18117 7.616 0.977 0.948 0.960 0.948 0.952 0.952 0.915 0.964 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
56. C48E7.3 lpd-2 10330 7.615 0.963 0.969 0.958 0.969 0.971 0.984 0.923 0.878 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
57. D2013.7 eif-3.F 21004 7.615 0.946 0.969 0.982 0.969 0.965 0.930 0.920 0.934 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
58. M7.1 let-70 85699 7.615 0.959 0.978 0.981 0.978 0.954 0.906 0.923 0.936 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
59. F26F4.10 rars-1 9971 7.611 0.968 0.955 0.976 0.955 0.963 0.938 0.929 0.927 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
60. ZK328.5 npp-10 7652 7.61 0.910 0.958 0.954 0.958 0.963 0.960 0.956 0.951 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
61. ZK1127.4 ZK1127.4 3088 7.61 0.944 0.962 0.960 0.962 0.984 0.945 0.942 0.911 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
62. T12D8.2 drr-2 16208 7.609 0.953 0.976 0.987 0.976 0.944 0.927 0.912 0.934 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
63. T20F5.2 pbs-4 8985 7.608 0.976 0.962 0.961 0.962 0.935 0.925 0.903 0.984 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
64. T10F2.4 prp-19 11298 7.607 0.982 0.978 0.974 0.978 0.975 0.923 0.917 0.880 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
65. K04G2.1 iftb-1 12590 7.606 0.942 0.972 0.968 0.972 0.961 0.911 0.927 0.953 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
66. C34B2.6 C34B2.6 7529 7.605 0.944 0.950 0.951 0.950 0.975 0.959 0.969 0.907 Lon protease homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44952]
67. T12D8.8 hip-1 18283 7.605 0.954 0.956 0.964 0.956 0.968 0.940 0.931 0.936 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
68. T06D8.6 cchl-1 26292 7.604 0.966 0.968 0.984 0.968 0.943 0.913 0.888 0.974 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
69. Y40B1B.5 eif-3.J 15061 7.604 0.968 0.976 0.966 0.976 0.981 0.921 0.909 0.907 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
70. C25A1.5 C25A1.5 9135 7.603 0.953 0.933 0.975 0.933 0.932 0.968 0.933 0.976
71. F41E6.4 smk-1 22394 7.603 0.938 0.969 0.949 0.969 0.964 0.947 0.909 0.958 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
72. Y48G8AL.6 smg-2 12561 7.601 0.956 0.961 0.947 0.961 0.956 0.941 0.924 0.955 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
73. ZK616.6 perm-3 16186 7.601 0.958 0.959 0.964 0.959 0.963 0.958 0.944 0.896 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
74. F32D1.9 fipp-1 10239 7.6 0.979 0.971 0.955 0.971 0.920 0.923 0.925 0.956 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
75. T17E9.2 nmt-1 8017 7.597 0.959 0.976 0.972 0.976 0.953 0.921 0.919 0.921 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
76. H06H21.3 eif-1.A 40990 7.597 0.955 0.971 0.963 0.971 0.950 0.922 0.916 0.949 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
77. T27F7.3 eif-1 28176 7.596 0.940 0.956 0.971 0.956 0.979 0.929 0.937 0.928 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
78. T12D8.3 acbp-5 6816 7.595 0.950 0.965 0.930 0.965 0.964 0.962 0.952 0.907 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
79. T12E12.4 drp-1 7694 7.594 0.965 0.964 0.948 0.964 0.974 0.935 0.937 0.907 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
80. F37A4.8 isw-1 9337 7.594 0.961 0.967 0.943 0.967 0.961 0.942 0.917 0.936 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
81. F55B12.3 sel-10 10304 7.594 0.974 0.967 0.923 0.967 0.944 0.928 0.920 0.971 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
82. C03C10.1 kin-19 53180 7.594 0.962 0.966 0.977 0.966 0.949 0.924 0.898 0.952 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
83. Y55B1AR.2 Y55B1AR.2 4511 7.593 0.945 0.950 0.954 0.950 0.971 0.971 0.955 0.897
84. F39B2.11 mtx-1 8526 7.591 0.983 0.946 0.947 0.946 0.968 0.942 0.936 0.923 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
85. B0348.6 ife-3 26859 7.591 0.981 0.961 0.951 0.961 0.935 0.930 0.916 0.956 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
86. K07C5.8 cash-1 10523 7.587 0.975 0.953 0.937 0.953 0.964 0.969 0.925 0.911 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
87. F21C3.3 hint-1 7078 7.586 0.942 0.940 0.944 0.940 0.965 0.955 0.941 0.959 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
88. F20D12.1 csr-1 16351 7.585 0.931 0.945 0.958 0.945 0.962 0.949 0.939 0.956 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
89. H06H21.6 ubxn-6 9202 7.584 0.967 0.949 0.937 0.949 0.933 0.961 0.947 0.941 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
90. B0432.2 djr-1.1 8628 7.581 0.944 0.956 0.931 0.956 0.945 0.950 0.944 0.955 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
91. T27E9.7 abcf-2 40273 7.581 0.959 0.957 0.966 0.957 0.969 0.896 0.930 0.947 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
92. C26D10.2 hel-1 28697 7.58 0.945 0.981 0.969 0.981 0.950 0.917 0.929 0.908 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
93. T04A8.14 emb-5 11746 7.579 0.951 0.974 0.958 0.974 0.975 0.962 0.888 0.897 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
94. F56A8.6 cpf-2 2730 7.578 0.957 0.956 0.927 0.956 0.958 0.969 0.921 0.934 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
95. F18E2.3 scc-3 13464 7.578 0.963 0.964 0.947 0.964 0.961 0.934 0.945 0.900 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
96. D1081.9 D1081.9 3792 7.578 0.940 0.952 0.961 0.952 0.959 0.957 0.942 0.915
97. R08D7.3 eif-3.D 6740 7.578 0.944 0.943 0.968 0.943 0.962 0.919 0.924 0.975 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
98. W03F9.5 ttb-1 8682 7.577 0.970 0.953 0.952 0.953 0.953 0.950 0.925 0.921 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
99. B0205.1 B0205.1 2403 7.577 0.956 0.945 0.912 0.945 0.967 0.936 0.947 0.969
100. Y18D10A.20 pfn-1 33871 7.577 0.943 0.946 0.942 0.946 0.983 0.932 0.915 0.970 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]

There are 2443 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA