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Results for Y48G8AL.6

Gene ID Gene Name Reads Transcripts Annotation
Y48G8AL.6 smg-2 12561 Y48G8AL.6 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]

Genes with expression patterns similar to Y48G8AL.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48G8AL.6 smg-2 12561 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
2. F41E6.4 smk-1 22394 7.783 0.974 0.974 0.966 0.974 0.978 0.983 0.963 0.971 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
3. C50C3.6 prp-8 19582 7.767 0.979 0.962 0.970 0.962 0.974 0.976 0.971 0.973 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
4. Y54E10A.9 vbh-1 28746 7.765 0.967 0.971 0.964 0.971 0.981 0.982 0.967 0.962 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
5. K01C8.10 cct-4 15077 7.761 0.973 0.973 0.961 0.973 0.982 0.972 0.973 0.954 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
6. T20H4.3 pars-1 8167 7.757 0.975 0.959 0.972 0.959 0.970 0.989 0.967 0.966 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
7. D2089.1 rsp-7 11057 7.756 0.966 0.973 0.974 0.973 0.976 0.992 0.956 0.946 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
8. C27D11.1 egl-45 28282 7.747 0.972 0.957 0.965 0.957 0.966 0.981 0.974 0.975 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
9. ZK381.4 pgl-1 20651 7.745 0.971 0.980 0.969 0.980 0.956 0.954 0.968 0.967 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
10. T23D8.4 eif-3.C 15343 7.742 0.977 0.968 0.969 0.968 0.978 0.978 0.934 0.970 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
11. Y40B1B.5 eif-3.J 15061 7.739 0.974 0.965 0.962 0.965 0.980 0.975 0.962 0.956 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
12. F39H11.5 pbs-7 13631 7.735 0.946 0.976 0.960 0.976 0.974 0.966 0.965 0.972 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
13. C53D5.6 imb-3 28921 7.732 0.962 0.974 0.974 0.974 0.974 0.972 0.923 0.979 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
14. T10F2.1 gars-1 7204 7.727 0.974 0.971 0.956 0.971 0.980 0.990 0.942 0.943 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
15. Y67D8C.5 eel-1 30623 7.727 0.975 0.975 0.965 0.975 0.970 0.953 0.939 0.975 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
16. F18E2.3 scc-3 13464 7.724 0.955 0.972 0.961 0.972 0.973 0.966 0.967 0.958 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
17. F31D4.3 fkb-6 21313 7.724 0.963 0.977 0.975 0.977 0.971 0.956 0.953 0.952 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
18. C32E8.11 ubr-1 10338 7.723 0.954 0.980 0.971 0.980 0.978 0.964 0.934 0.962 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
19. F46A9.4 skr-2 16831 7.723 0.979 0.957 0.963 0.957 0.972 0.969 0.960 0.966 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
20. Y116A8C.35 uaf-2 13808 7.721 0.946 0.961 0.960 0.961 0.971 0.976 0.968 0.978 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
21. F20D12.1 csr-1 16351 7.719 0.970 0.974 0.961 0.974 0.954 0.971 0.940 0.975 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
22. C43E11.1 acin-1 7781 7.717 0.957 0.971 0.969 0.971 0.968 0.967 0.964 0.950 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
23. H06H21.3 eif-1.A 40990 7.716 0.963 0.975 0.943 0.975 0.979 0.980 0.969 0.932 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
24. F36F2.3 rbpl-1 15376 7.716 0.941 0.976 0.964 0.976 0.976 0.984 0.926 0.973 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
25. F39B2.10 dnj-12 35162 7.714 0.957 0.961 0.969 0.961 0.974 0.990 0.977 0.925 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
26. Y47G6A.20 rnp-6 5542 7.714 0.942 0.964 0.953 0.964 0.973 0.985 0.946 0.987 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
27. Y61A9LA.8 sut-2 11388 7.713 0.966 0.958 0.979 0.958 0.976 0.985 0.936 0.955 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
28. F57B9.5 byn-1 58236 7.712 0.970 0.964 0.922 0.964 0.966 0.984 0.973 0.969 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
29. T10F2.4 prp-19 11298 7.711 0.958 0.965 0.977 0.965 0.970 0.969 0.950 0.957 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
30. F48E8.6 disl-2 8774 7.711 0.941 0.967 0.962 0.967 0.978 0.983 0.947 0.966 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
31. T12D8.2 drr-2 16208 7.711 0.952 0.953 0.955 0.953 0.981 0.980 0.967 0.970 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
32. F36A4.7 ama-1 13620 7.706 0.956 0.971 0.972 0.971 0.971 0.988 0.929 0.948 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
33. K12D12.1 top-2 18694 7.706 0.953 0.972 0.947 0.972 0.964 0.963 0.968 0.967 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
34. C47B2.4 pbs-2 19805 7.705 0.957 0.975 0.958 0.975 0.979 0.940 0.953 0.968 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
35. T01G9.6 kin-10 27360 7.704 0.961 0.978 0.936 0.978 0.985 0.972 0.940 0.954 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
36. F22D6.3 nars-1 18624 7.704 0.941 0.978 0.972 0.978 0.963 0.951 0.962 0.959 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
37. T27E9.7 abcf-2 40273 7.703 0.976 0.965 0.966 0.965 0.984 0.944 0.968 0.935 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
38. K04G2.1 iftb-1 12590 7.701 0.940 0.953 0.955 0.953 0.985 0.988 0.961 0.966 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
39. K08D12.1 pbs-1 21677 7.7 0.954 0.961 0.966 0.961 0.967 0.963 0.957 0.971 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
40. Y54E2A.11 eif-3.B 13795 7.697 0.963 0.974 0.944 0.974 0.971 0.978 0.952 0.941 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
41. Y65B4BR.5 icd-2 58321 7.696 0.946 0.970 0.952 0.970 0.950 0.974 0.956 0.978 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
42. K10D2.3 cid-1 7175 7.696 0.949 0.974 0.958 0.974 0.978 0.968 0.954 0.941 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
43. C34E10.5 prmt-5 12277 7.695 0.986 0.972 0.973 0.972 0.942 0.955 0.940 0.955 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
44. C47D12.6 tars-1 23488 7.692 0.960 0.962 0.929 0.962 0.976 0.971 0.966 0.966 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
45. F26F4.10 rars-1 9971 7.69 0.970 0.950 0.967 0.950 0.970 0.983 0.946 0.954 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
46. C18D11.4 rsp-8 18308 7.689 0.951 0.956 0.957 0.956 0.981 0.978 0.964 0.946 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
47. C08B11.6 arp-6 4646 7.689 0.946 0.959 0.955 0.959 0.981 0.970 0.970 0.949 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
48. W03F9.5 ttb-1 8682 7.688 0.959 0.962 0.954 0.962 0.977 0.974 0.938 0.962 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
49. Y113G7B.23 swsn-1 13766 7.687 0.942 0.957 0.956 0.957 0.963 0.970 0.965 0.977 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
50. T06D8.6 cchl-1 26292 7.687 0.945 0.955 0.960 0.955 0.977 0.967 0.967 0.961 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
51. Y38A8.2 pbs-3 18117 7.685 0.950 0.955 0.948 0.955 0.983 0.973 0.958 0.963 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
52. F28D9.1 rsr-1 4282 7.684 0.951 0.960 0.962 0.960 0.964 0.977 0.947 0.963 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
53. F56B3.12 skr-18 6534 7.684 0.950 0.957 0.954 0.957 0.952 0.970 0.965 0.979 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
54. Y81G3A.3 gcn-2 5831 7.684 0.969 0.966 0.950 0.966 0.959 0.986 0.935 0.953 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
55. K02F2.1 dpf-3 11465 7.682 0.942 0.955 0.964 0.955 0.987 0.987 0.974 0.918 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
56. ZK328.5 npp-10 7652 7.68 0.902 0.969 0.981 0.969 0.977 0.968 0.955 0.959 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
57. T01G1.3 sec-31 10504 7.678 0.958 0.974 0.945 0.974 0.970 0.990 0.917 0.950 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
58. Y39G10AR.9 Y39G10AR.9 3972 7.677 0.966 0.954 0.946 0.954 0.972 0.967 0.951 0.967
59. F46B6.3 smg-4 4959 7.675 0.978 0.964 0.964 0.964 0.981 0.948 0.925 0.951 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
60. F45H11.3 hpo-35 8299 7.675 0.972 0.966 0.938 0.966 0.978 0.974 0.947 0.934
61. Y102A5A.1 cand-1 11808 7.672 0.952 0.947 0.960 0.947 0.984 0.968 0.943 0.971 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
62. T05F1.6 hsr-9 13312 7.672 0.968 0.967 0.956 0.967 0.974 0.959 0.923 0.958
63. F10G8.3 rae-1 7542 7.672 0.963 0.962 0.962 0.962 0.967 0.966 0.940 0.950 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
64. F28B3.7 him-1 18274 7.671 0.962 0.980 0.958 0.980 0.966 0.975 0.930 0.920 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
65. CD4.6 pas-6 18332 7.67 0.927 0.952 0.979 0.952 0.961 0.971 0.949 0.979 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
66. C26D10.2 hel-1 28697 7.67 0.957 0.970 0.948 0.970 0.957 0.938 0.963 0.967 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
67. Y92C3B.2 uaf-1 14981 7.669 0.963 0.971 0.954 0.971 0.968 0.943 0.938 0.961 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
68. C36B1.8 gls-1 8617 7.668 0.947 0.959 0.949 0.959 0.975 0.982 0.950 0.947 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
69. T12D8.8 hip-1 18283 7.666 0.929 0.938 0.960 0.938 0.982 0.983 0.964 0.972 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
70. F45H11.2 ned-8 13247 7.666 0.924 0.946 0.955 0.946 0.981 0.982 0.956 0.976 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
71. Y71D11A.2 smr-1 4976 7.664 0.926 0.958 0.942 0.958 0.970 0.964 0.970 0.976 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
72. T20H4.4 adr-2 5495 7.662 0.922 0.957 0.968 0.957 0.969 0.962 0.974 0.953 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
73. Y71H2AM.19 laf-1 9160 7.66 0.939 0.957 0.932 0.957 0.976 0.971 0.951 0.977 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
74. C36B1.4 pas-4 13140 7.66 0.928 0.958 0.923 0.958 0.978 0.975 0.964 0.976 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
75. C06E7.1 sams-3 26921 7.66 0.970 0.962 0.964 0.962 0.966 0.968 0.923 0.945 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
76. F44A2.1 tag-153 16535 7.659 0.970 0.970 0.942 0.970 0.957 0.960 0.934 0.956
77. R08D7.3 eif-3.D 6740 7.659 0.981 0.960 0.931 0.960 0.965 0.964 0.933 0.965 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
78. C08B11.7 ubh-4 3186 7.658 0.944 0.963 0.946 0.963 0.972 0.979 0.941 0.950 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
79. T01G9.4 npp-2 5361 7.654 0.932 0.957 0.942 0.957 0.976 0.945 0.968 0.977 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
80. H19N07.1 erfa-3 19869 7.654 0.963 0.976 0.953 0.976 0.965 0.970 0.930 0.921 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
81. Y41E3.4 qars-1 4391 7.654 0.965 0.943 0.946 0.943 0.971 0.991 0.947 0.948 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
82. C08C3.4 cyk-7 12075 7.654 0.967 0.951 0.970 0.951 0.966 0.944 0.951 0.954 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
83. F37E3.1 ncbp-1 5649 7.652 0.952 0.965 0.945 0.965 0.972 0.977 0.949 0.927 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
84. F56A8.6 cpf-2 2730 7.649 0.958 0.941 0.946 0.941 0.960 0.978 0.966 0.959 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
85. F35G12.2 idhg-1 30065 7.648 0.953 0.961 0.957 0.961 0.964 0.965 0.964 0.923 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
86. Y110A7A.14 pas-3 6831 7.648 0.954 0.972 0.943 0.972 0.964 0.953 0.932 0.958 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
87. Y71F9B.16 dnj-30 4262 7.648 0.943 0.952 0.964 0.952 0.966 0.975 0.939 0.957 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
88. T10C6.4 srx-44 8454 7.647 0.940 0.949 0.964 0.949 0.974 0.963 0.938 0.970 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
89. Y111B2A.18 rsp-3 43731 7.646 0.953 0.937 0.958 0.937 0.962 0.960 0.963 0.976 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
90. Y105E8A.17 ekl-4 4732 7.646 0.926 0.978 0.947 0.978 0.976 0.974 0.908 0.959
91. F56D1.7 daz-1 23684 7.646 0.970 0.960 0.972 0.960 0.954 0.951 0.919 0.960 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
92. Y55D9A.1 efa-6 10012 7.646 0.898 0.964 0.955 0.964 0.973 0.967 0.970 0.955 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
93. F22D6.6 ekl-1 2926 7.645 0.972 0.947 0.946 0.947 0.971 0.980 0.945 0.937
94. B0511.10 eif-3.E 10041 7.645 0.943 0.952 0.936 0.952 0.958 0.985 0.958 0.961 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
95. T05H4.6 erfa-1 12542 7.645 0.955 0.974 0.936 0.974 0.964 0.955 0.946 0.941 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
96. F35G12.8 smc-4 6202 7.643 0.945 0.966 0.949 0.966 0.979 0.959 0.936 0.943 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
97. ZK616.6 perm-3 16186 7.642 0.943 0.958 0.973 0.958 0.945 0.971 0.956 0.938 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
98. T17E9.2 nmt-1 8017 7.642 0.929 0.970 0.935 0.970 0.963 0.963 0.937 0.975 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
99. F42A10.1 abcf-3 5557 7.642 0.953 0.956 0.944 0.956 0.952 0.976 0.951 0.954 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
100. F56A3.3 npp-6 5425 7.64 0.943 0.965 0.966 0.965 0.958 0.978 0.939 0.926 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA