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Results for D2013.7

Gene ID Gene Name Reads Transcripts Annotation
D2013.7 eif-3.F 21004 D2013.7 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]

Genes with expression patterns similar to D2013.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2013.7 eif-3.F 21004 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
2. Y40B1B.5 eif-3.J 15061 7.813 0.967 0.972 0.973 0.972 0.987 0.985 0.975 0.982 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
3. T08B2.9 fars-1 12650 7.811 0.973 0.975 0.979 0.975 0.968 0.993 0.973 0.975 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
4. B0464.1 dars-1 12331 7.81 0.980 0.980 0.978 0.980 0.992 0.963 0.976 0.961 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
5. T27F7.3 eif-1 28176 7.807 0.985 0.962 0.987 0.962 0.984 0.968 0.978 0.981 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
6. Y39A1C.3 cey-4 50694 7.789 0.961 0.980 0.966 0.980 0.974 0.984 0.962 0.982 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
7. F26F4.10 rars-1 9971 7.786 0.956 0.971 0.975 0.971 0.991 0.983 0.958 0.981 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
8. F22B5.9 fars-3 7209 7.784 0.968 0.983 0.974 0.983 0.982 0.970 0.957 0.967 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
9. K08F11.3 cif-1 10218 7.781 0.977 0.974 0.969 0.974 0.988 0.969 0.953 0.977 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
10. C09D4.5 rpl-19 56944 7.777 0.968 0.965 0.957 0.965 0.986 0.983 0.969 0.984 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
11. T05H4.6 erfa-1 12542 7.776 0.974 0.967 0.971 0.967 0.981 0.977 0.964 0.975 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
12. F57B9.5 byn-1 58236 7.775 0.977 0.979 0.965 0.979 0.979 0.967 0.960 0.969 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
13. K04D7.2 mspn-1 48187 7.773 0.967 0.965 0.955 0.965 0.981 0.987 0.967 0.986 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
14. T16G1.11 eif-3.K 14014 7.771 0.973 0.978 0.979 0.978 0.983 0.976 0.943 0.961 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
15. F13G3.4 dylt-1 21345 7.768 0.977 0.970 0.977 0.970 0.977 0.988 0.948 0.961 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
16. C41D11.2 eif-3.H 7520 7.765 0.967 0.970 0.983 0.970 0.976 0.982 0.960 0.957 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
17. Y37E3.9 phb-1 29211 7.759 0.978 0.970 0.967 0.970 0.965 0.980 0.940 0.989 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
18. K07A12.7 mrps-15 6325 7.759 0.982 0.975 0.945 0.975 0.990 0.965 0.967 0.960 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
19. K04G2.1 iftb-1 12590 7.758 0.974 0.977 0.974 0.977 0.979 0.949 0.969 0.959 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
20. C26D10.2 hel-1 28697 7.755 0.987 0.979 0.974 0.979 0.977 0.946 0.955 0.958 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
21. T27E9.7 abcf-2 40273 7.754 0.977 0.987 0.975 0.987 0.966 0.938 0.954 0.970 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
22. T17E9.2 nmt-1 8017 7.75 0.973 0.974 0.979 0.974 0.987 0.961 0.930 0.972 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
23. T11G6.1 hars-1 7908 7.75 0.967 0.975 0.974 0.975 0.978 0.985 0.939 0.957 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
24. F17C11.9 eef-1G 37911 7.75 0.958 0.980 0.955 0.980 0.976 0.965 0.955 0.981 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
25. C47D12.6 tars-1 23488 7.748 0.956 0.977 0.966 0.977 0.989 0.984 0.912 0.987 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
26. B0511.10 eif-3.E 10041 7.747 0.970 0.966 0.959 0.966 0.971 0.974 0.971 0.970 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
27. H21P03.1 mbf-1 25586 7.747 0.972 0.973 0.977 0.973 0.971 0.981 0.936 0.964 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
28. Y62E10A.1 rla-2 59665 7.744 0.962 0.966 0.951 0.966 0.968 0.995 0.970 0.966 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
29. B0336.9 swp-1 52442 7.744 0.966 0.958 0.957 0.958 0.975 0.984 0.965 0.981 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
30. F25H5.4 eef-2 34846 7.744 0.964 0.969 0.938 0.969 0.982 0.967 0.969 0.986 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
31. Y65B4BR.5 icd-2 58321 7.743 0.969 0.975 0.972 0.975 0.973 0.968 0.930 0.981 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
32. H19N07.1 erfa-3 19869 7.742 0.981 0.980 0.975 0.980 0.986 0.986 0.901 0.953 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
33. C18E9.6 tomm-40 13426 7.742 0.972 0.979 0.977 0.979 0.982 0.968 0.933 0.952 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
34. T20H4.3 pars-1 8167 7.74 0.959 0.975 0.941 0.975 0.970 0.971 0.959 0.990 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
35. C56C10.8 icd-1 89788 7.738 0.956 0.970 0.959 0.970 0.974 0.962 0.962 0.985 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
36. T02G5.9 kars-1 9763 7.738 0.957 0.982 0.977 0.982 0.973 0.950 0.968 0.949 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
37. Y57G11C.16 rps-18 76576 7.737 0.962 0.969 0.925 0.969 0.975 0.986 0.976 0.975 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
38. K04D7.1 rack-1 48949 7.736 0.953 0.965 0.963 0.965 0.972 0.966 0.966 0.986 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
39. B0205.7 kin-3 29775 7.735 0.981 0.981 0.991 0.981 0.945 0.955 0.934 0.967 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
40. F53A3.3 rps-22 81093 7.734 0.952 0.958 0.939 0.958 0.984 0.990 0.966 0.987 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
41. F22D6.3 nars-1 18624 7.733 0.953 0.965 0.966 0.965 0.994 0.979 0.946 0.965 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
42. F28H1.3 aars-2 13537 7.732 0.956 0.981 0.966 0.981 0.967 0.984 0.939 0.958 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
43. H06H21.3 eif-1.A 40990 7.731 0.985 0.992 0.978 0.992 0.948 0.958 0.927 0.951 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
44. C18D11.4 rsp-8 18308 7.728 0.963 0.964 0.965 0.964 0.986 0.962 0.951 0.973 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
45. ZK616.6 perm-3 16186 7.724 0.960 0.955 0.962 0.955 0.984 0.977 0.975 0.956 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
46. F08F8.3 kap-1 31437 7.723 0.973 0.960 0.956 0.960 0.979 0.969 0.953 0.973 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
47. Y39G10AR.9 Y39G10AR.9 3972 7.723 0.981 0.909 0.977 0.909 0.991 0.986 0.981 0.989
48. T01E8.6 mrps-14 9328 7.722 0.975 0.970 0.977 0.970 0.967 0.957 0.944 0.962 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
49. T12D8.2 drr-2 16208 7.718 0.955 0.984 0.982 0.984 0.978 0.941 0.942 0.952 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
50. C32E8.2 rpl-13 70096 7.718 0.957 0.964 0.941 0.964 0.969 0.968 0.971 0.984 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
51. C15H11.4 dhs-22 21674 7.713 0.950 0.948 0.960 0.948 0.987 0.992 0.965 0.963 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
52. Y111B2A.18 rsp-3 43731 7.712 0.953 0.954 0.933 0.954 0.989 0.977 0.970 0.982 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
53. Y73B6BL.6 sqd-1 41708 7.711 0.968 0.968 0.975 0.968 0.967 0.972 0.930 0.963 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
54. C34E10.5 prmt-5 12277 7.711 0.962 0.982 0.971 0.982 0.970 0.952 0.930 0.962 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
55. T12D8.8 hip-1 18283 7.71 0.944 0.948 0.971 0.948 0.988 0.971 0.953 0.987 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
56. T24H7.1 phb-2 28775 7.71 0.979 0.968 0.939 0.968 0.982 0.960 0.935 0.979 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
57. F21C3.3 hint-1 7078 7.71 0.982 0.959 0.949 0.959 0.976 0.969 0.947 0.969 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
58. C34E10.1 gop-3 11393 7.709 0.980 0.971 0.971 0.971 0.969 0.942 0.946 0.959 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
59. W04D2.5 mrps-11 5757 7.709 0.984 0.949 0.972 0.949 0.982 0.959 0.954 0.960 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
60. T21C9.12 scpl-4 14723 7.704 0.962 0.977 0.979 0.977 0.988 0.958 0.899 0.964 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
61. T05F1.3 rps-19 88407 7.703 0.958 0.949 0.940 0.949 0.978 0.985 0.964 0.980 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
62. F42A6.7 hrp-1 28201 7.703 0.957 0.945 0.964 0.945 0.988 0.962 0.954 0.988 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
63. T23D8.4 eif-3.C 15343 7.702 0.954 0.978 0.975 0.978 0.971 0.965 0.905 0.976 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
64. Y116A8C.35 uaf-2 13808 7.694 0.948 0.951 0.957 0.951 0.993 0.968 0.944 0.982 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
65. F54A3.3 cct-3 25183 7.694 0.970 0.980 0.972 0.980 0.950 0.979 0.903 0.960 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
66. JC8.3 rpl-12 52728 7.693 0.957 0.960 0.931 0.960 0.983 0.954 0.959 0.989 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
67. F56B3.12 skr-18 6534 7.693 0.974 0.962 0.971 0.962 0.970 0.939 0.955 0.960 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
68. Y18D10A.19 fkb-2 48128 7.693 0.970 0.976 0.935 0.976 0.977 0.929 0.950 0.980 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
69. F58D5.1 hrp-2 17211 7.693 0.955 0.977 0.979 0.977 0.973 0.954 0.911 0.967 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
70. F54H12.6 eef-1B.1 37095 7.692 0.960 0.947 0.933 0.947 0.993 0.973 0.961 0.978 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
71. W08E3.3 ola-1 20885 7.692 0.982 0.967 0.976 0.967 0.963 0.980 0.908 0.949 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
72. T10F2.4 prp-19 11298 7.692 0.958 0.979 0.965 0.979 0.988 0.936 0.928 0.959 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
73. ZK652.1 snr-5 5993 7.691 0.977 0.967 0.953 0.967 0.986 0.959 0.913 0.969 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
74. R11D1.8 rpl-28 62242 7.69 0.953 0.948 0.932 0.948 0.982 0.976 0.965 0.986 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
75. Y54E10A.9 vbh-1 28746 7.689 0.968 0.970 0.977 0.970 0.970 0.949 0.920 0.965 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
76. F56F3.5 rps-1 85503 7.686 0.941 0.967 0.927 0.967 0.977 0.982 0.951 0.974 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
77. B0261.4 mrpl-47 8210 7.685 0.968 0.954 0.957 0.954 0.972 0.979 0.948 0.953 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
78. F25H2.11 tct-1 41796 7.681 0.957 0.957 0.919 0.957 0.990 0.986 0.941 0.974 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
79. F39B2.2 uev-1 13597 7.68 0.958 0.965 0.957 0.965 0.974 0.934 0.943 0.984 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
80. F36A4.7 ama-1 13620 7.678 0.918 0.970 0.967 0.970 0.990 0.970 0.918 0.975 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
81. C50C3.6 prp-8 19582 7.676 0.958 0.973 0.952 0.973 0.988 0.962 0.910 0.960 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
82. C07G2.3 cct-5 44703 7.675 0.967 0.986 0.983 0.986 0.936 0.960 0.908 0.949 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
83. Y39E4B.1 abce-1 4178 7.675 0.953 0.952 0.945 0.952 0.988 0.962 0.955 0.968 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]
84. R144.7 larp-1 24669 7.674 0.944 0.977 0.954 0.977 0.980 0.952 0.916 0.974 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
85. T10F2.1 gars-1 7204 7.674 0.965 0.980 0.970 0.980 0.976 0.928 0.918 0.957 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
86. T21B10.1 mrpl-50 14595 7.672 0.977 0.985 0.981 0.985 0.932 0.962 0.928 0.922 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
87. T23B12.3 mrps-2 5434 7.672 0.942 0.972 0.953 0.972 0.973 0.952 0.957 0.951 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
88. Y54E2A.11 eif-3.B 13795 7.671 0.978 0.982 0.987 0.982 0.950 0.897 0.952 0.943 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
89. C53D5.6 imb-3 28921 7.671 0.962 0.982 0.979 0.982 0.983 0.915 0.926 0.942 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
90. F39B2.10 dnj-12 35162 7.669 0.974 0.974 0.956 0.974 0.952 0.947 0.923 0.969 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
91. K04G7.10 rnp-7 11219 7.669 0.972 0.959 0.978 0.959 0.970 0.967 0.916 0.948 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
92. C05D11.10 mrps-17 4613 7.669 0.967 0.961 0.963 0.961 0.973 0.947 0.942 0.955 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
93. T05E11.1 rps-5 79298 7.667 0.956 0.948 0.932 0.948 0.968 0.962 0.967 0.986 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
94. Y102A5A.1 cand-1 11808 7.667 0.950 0.938 0.966 0.938 0.980 0.977 0.937 0.981 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
95. K08F4.2 gtbp-1 25222 7.665 0.977 0.980 0.983 0.980 0.939 0.940 0.899 0.967 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
96. F35G12.2 idhg-1 30065 7.66 0.967 0.985 0.979 0.985 0.952 0.934 0.912 0.946 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
97. C33H5.12 rsp-6 23342 7.659 0.933 0.971 0.948 0.971 0.977 0.960 0.925 0.974 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
98. Y18D10A.25 fkb-8 8968 7.659 0.973 0.962 0.944 0.962 0.952 0.956 0.951 0.959 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
99. T25D3.2 mrpl-28 4649 7.658 0.964 0.957 0.964 0.957 0.983 0.937 0.961 0.935 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
100. T10B5.5 cct-7 24616 7.657 0.948 0.979 0.956 0.979 0.958 0.967 0.909 0.961 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA