C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T27F7.3

Gene ID Gene Name Reads Transcripts Annotation
T27F7.3 eif-1 28176 T27F7.3 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]

Genes with expression patterns similar to T27F7.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T27F7.3 eif-1 28176 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
2. K04G2.1 iftb-1 12590 7.833 0.975 0.977 0.975 0.977 0.991 0.984 0.983 0.971 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
3. Y40B1B.5 eif-3.J 15061 7.812 0.969 0.976 0.979 0.976 0.989 0.977 0.973 0.973 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
4. B0205.7 kin-3 29775 7.807 0.987 0.975 0.986 0.975 0.977 0.968 0.966 0.973 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
5. D2013.7 eif-3.F 21004 7.807 0.985 0.962 0.987 0.962 0.984 0.968 0.978 0.981 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
6. F57B9.5 byn-1 58236 7.798 0.977 0.980 0.976 0.980 0.988 0.967 0.980 0.950 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
7. T12D8.8 hip-1 18283 7.784 0.945 0.970 0.980 0.970 0.987 0.983 0.973 0.976 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
8. H06H21.3 eif-1.A 40990 7.78 0.983 0.975 0.988 0.975 0.976 0.985 0.950 0.948 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
9. B0464.1 dars-1 12331 7.779 0.975 0.963 0.986 0.963 0.975 0.979 0.974 0.964 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
10. T27E9.7 abcf-2 40273 7.776 0.970 0.964 0.978 0.964 0.986 0.974 0.970 0.970 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
11. B0511.10 eif-3.E 10041 7.775 0.970 0.971 0.960 0.971 0.976 0.979 0.977 0.971 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
12. C56C10.8 icd-1 89788 7.765 0.967 0.978 0.974 0.978 0.974 0.971 0.951 0.972 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
13. F39B2.10 dnj-12 35162 7.76 0.976 0.972 0.966 0.972 0.972 0.967 0.956 0.979 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
14. Y39A1C.3 cey-4 50694 7.758 0.965 0.970 0.984 0.970 0.968 0.964 0.962 0.975 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
15. T01G9.6 kin-10 27360 7.748 0.979 0.971 0.983 0.971 0.985 0.973 0.920 0.966 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
16. F26F4.10 rars-1 9971 7.747 0.944 0.957 0.982 0.957 0.982 0.980 0.970 0.975 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
17. H19N07.1 erfa-3 19869 7.747 0.978 0.973 0.983 0.973 0.976 0.977 0.920 0.967 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
18. Y54E10A.9 vbh-1 28746 7.743 0.974 0.958 0.978 0.958 0.985 0.979 0.949 0.962 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
19. K08F11.3 cif-1 10218 7.743 0.981 0.974 0.979 0.974 0.968 0.959 0.956 0.952 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
20. K04D7.2 mspn-1 48187 7.742 0.971 0.946 0.978 0.946 0.973 0.984 0.968 0.976 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
21. C09D4.5 rpl-19 56944 7.74 0.972 0.945 0.975 0.945 0.976 0.980 0.966 0.981 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
22. F35G12.2 idhg-1 30065 7.735 0.979 0.973 0.982 0.973 0.974 0.947 0.952 0.955 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
23. Y65B4BR.5 icd-2 58321 7.732 0.979 0.954 0.972 0.954 0.982 0.964 0.958 0.969 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
24. C18D11.4 rsp-8 18308 7.732 0.951 0.966 0.948 0.966 0.988 0.971 0.970 0.972 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
25. F21C3.3 hint-1 7078 7.73 0.974 0.963 0.964 0.963 0.972 0.959 0.971 0.964 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
26. K04D7.1 rack-1 48949 7.73 0.961 0.949 0.976 0.949 0.966 0.984 0.966 0.979 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
27. M117.2 par-5 64868 7.728 0.967 0.976 0.988 0.976 0.964 0.967 0.938 0.952 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
28. T20H4.3 pars-1 8167 7.727 0.941 0.954 0.964 0.954 0.980 0.988 0.968 0.978 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
29. Y67D8C.5 eel-1 30623 7.717 0.940 0.976 0.971 0.976 0.974 0.963 0.941 0.976 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
30. Y73B6BL.6 sqd-1 41708 7.716 0.978 0.947 0.960 0.947 0.979 0.964 0.959 0.982 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
31. Y116A8C.35 uaf-2 13808 7.714 0.956 0.952 0.965 0.952 0.987 0.987 0.967 0.948 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
32. F45H11.2 ned-8 13247 7.713 0.960 0.946 0.967 0.946 0.984 0.974 0.954 0.982 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
33. C32E8.2 rpl-13 70096 7.71 0.956 0.956 0.963 0.956 0.969 0.981 0.963 0.966 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
34. T08B2.9 fars-1 12650 7.708 0.968 0.953 0.968 0.953 0.952 0.968 0.970 0.976 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
35. F17C11.9 eef-1G 37911 7.708 0.957 0.957 0.976 0.957 0.952 0.968 0.957 0.984 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
36. JC8.3 rpl-12 52728 7.707 0.958 0.949 0.955 0.949 0.973 0.986 0.956 0.981 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
37. C50C3.6 prp-8 19582 7.705 0.935 0.980 0.957 0.980 0.987 0.954 0.951 0.961 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
38. C27D11.1 egl-45 28282 7.704 0.943 0.969 0.986 0.969 0.980 0.956 0.954 0.947 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
39. Y39G10AR.9 Y39G10AR.9 3972 7.703 0.987 0.920 0.984 0.920 0.972 0.963 0.987 0.970
40. C34E10.1 gop-3 11393 7.701 0.971 0.942 0.972 0.942 0.988 0.954 0.948 0.984 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
41. ZK616.6 perm-3 16186 7.699 0.959 0.947 0.976 0.947 0.967 0.954 0.988 0.961 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
42. Y54E2A.11 eif-3.B 13795 7.696 0.967 0.953 0.983 0.953 0.980 0.945 0.973 0.942 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
43. F13G3.4 dylt-1 21345 7.696 0.978 0.953 0.960 0.953 0.958 0.965 0.977 0.952 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
44. F08F8.3 kap-1 31437 7.696 0.960 0.940 0.967 0.940 0.983 0.963 0.961 0.982 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
45. F25H2.11 tct-1 41796 7.695 0.963 0.960 0.943 0.960 0.970 0.974 0.950 0.975 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
46. T05H4.6 erfa-1 12542 7.688 0.953 0.949 0.966 0.949 0.969 0.940 0.980 0.982 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
47. F39B2.2 uev-1 13597 7.687 0.954 0.954 0.950 0.954 0.984 0.946 0.968 0.977 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
48. T17E9.2 nmt-1 8017 7.687 0.977 0.960 0.973 0.960 0.971 0.929 0.959 0.958 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
49. Y102A5A.1 cand-1 11808 7.686 0.944 0.947 0.960 0.947 0.979 0.978 0.963 0.968 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
50. K07A12.7 mrps-15 6325 7.685 0.977 0.946 0.964 0.946 0.972 0.966 0.973 0.941 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
51. F53G12.10 rpl-7 78552 7.684 0.939 0.945 0.942 0.945 0.979 0.978 0.980 0.976 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
52. Y37E3.9 phb-1 29211 7.684 0.985 0.967 0.973 0.967 0.940 0.926 0.949 0.977 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
53. K01C8.10 cct-4 15077 7.683 0.938 0.963 0.958 0.963 0.972 0.952 0.950 0.987 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
54. F36A4.7 ama-1 13620 7.683 0.913 0.965 0.971 0.965 0.981 0.983 0.941 0.964 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
55. Y111B2A.18 rsp-3 43731 7.681 0.947 0.950 0.945 0.950 0.983 0.965 0.981 0.960 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
56. T16G1.11 eif-3.K 14014 7.681 0.976 0.967 0.974 0.967 0.962 0.943 0.952 0.940 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
57. C41D11.2 eif-3.H 7520 7.679 0.976 0.943 0.974 0.943 0.980 0.969 0.956 0.938 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
58. F54H12.6 eef-1B.1 37095 7.678 0.957 0.938 0.955 0.938 0.980 0.971 0.965 0.974 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
59. R11D1.8 rpl-28 62242 7.676 0.963 0.932 0.957 0.932 0.982 0.983 0.961 0.966 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
60. C53D5.6 imb-3 28921 7.675 0.960 0.977 0.977 0.977 0.989 0.942 0.938 0.915 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
61. T05F1.3 rps-19 88407 7.675 0.958 0.943 0.960 0.943 0.967 0.978 0.952 0.974 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
62. K04G7.10 rnp-7 11219 7.674 0.973 0.954 0.965 0.954 0.981 0.966 0.930 0.951 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
63. T10F2.1 gars-1 7204 7.669 0.956 0.970 0.972 0.970 0.974 0.957 0.931 0.939 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
64. Y18D10A.19 fkb-2 48128 7.669 0.973 0.966 0.960 0.966 0.965 0.930 0.958 0.951 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
65. R144.7 larp-1 24669 7.667 0.943 0.980 0.945 0.980 0.974 0.960 0.928 0.957 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
66. F53A3.3 rps-22 81093 7.666 0.955 0.941 0.955 0.941 0.971 0.980 0.954 0.969 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
67. C15H11.4 dhs-22 21674 7.666 0.930 0.950 0.946 0.950 0.971 0.970 0.976 0.973 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
68. H21P03.1 mbf-1 25586 7.666 0.976 0.956 0.981 0.956 0.950 0.939 0.938 0.970 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
69. M7.1 let-70 85699 7.665 0.933 0.955 0.973 0.955 0.956 0.958 0.952 0.983 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
70. C53H9.1 rpl-27 59496 7.663 0.966 0.922 0.936 0.922 0.976 0.990 0.963 0.988 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
71. C47B2.4 pbs-2 19805 7.661 0.958 0.955 0.936 0.955 0.984 0.964 0.966 0.943 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
72. T12D8.2 drr-2 16208 7.661 0.958 0.967 0.976 0.967 0.977 0.948 0.951 0.917 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
73. ZK1010.1 ubq-2 87842 7.66 0.914 0.947 0.960 0.947 0.969 0.981 0.959 0.983 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
74. F22D6.3 nars-1 18624 7.658 0.952 0.957 0.975 0.957 0.980 0.941 0.947 0.949 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
75. Y39G8C.1 xrn-1 7488 7.657 0.944 0.960 0.945 0.960 0.966 0.988 0.951 0.943 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
76. T10F2.4 prp-19 11298 7.656 0.954 0.958 0.971 0.958 0.979 0.941 0.963 0.932 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
77. B0336.9 swp-1 52442 7.656 0.962 0.930 0.969 0.930 0.964 0.973 0.960 0.968 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
78. F56F3.5 rps-1 85503 7.655 0.938 0.948 0.948 0.948 0.976 0.977 0.952 0.968 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
79. Y62E10A.1 rla-2 59665 7.654 0.956 0.948 0.963 0.948 0.957 0.957 0.960 0.965 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
80. T23D8.4 eif-3.C 15343 7.654 0.943 0.971 0.979 0.971 0.973 0.953 0.913 0.951 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
81. ZK652.4 rpl-35 89991 7.653 0.955 0.953 0.932 0.953 0.949 0.981 0.953 0.977 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
82. C47D12.6 tars-1 23488 7.652 0.951 0.940 0.955 0.940 0.980 0.977 0.936 0.973 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
83. F56B3.12 skr-18 6534 7.651 0.976 0.947 0.984 0.947 0.982 0.930 0.961 0.924 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
84. C26D10.2 hel-1 28697 7.65 0.986 0.959 0.980 0.959 0.960 0.914 0.964 0.928 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
85. F26D10.3 hsp-1 98277 7.648 0.947 0.966 0.957 0.966 0.928 0.977 0.932 0.975 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
86. B0025.2 csn-2 5205 7.648 0.915 0.959 0.938 0.959 0.980 0.978 0.972 0.947 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
87. F42A6.7 hrp-1 28201 7.647 0.960 0.942 0.953 0.942 0.966 0.964 0.962 0.958 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
88. D1007.12 rpl-24.1 73724 7.647 0.946 0.930 0.960 0.930 0.965 0.983 0.963 0.970 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
89. M106.4 gmps-1 12232 7.645 0.951 0.941 0.973 0.941 0.976 0.976 0.925 0.962 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
90. T09A5.7 T09A5.7 5907 7.641 0.966 0.969 0.974 0.969 0.954 0.927 0.955 0.927
91. Y39A3CL.4 Y39A3CL.4 1283 7.64 0.971 0.912 0.940 0.912 0.983 0.977 0.973 0.972
92. Y71H2AM.19 laf-1 9160 7.637 0.979 0.966 0.962 0.966 0.980 0.946 0.913 0.925 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
93. C34E10.5 prmt-5 12277 7.637 0.950 0.968 0.975 0.968 0.954 0.928 0.948 0.946 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
94. Y48G8AL.6 smg-2 12561 7.637 0.942 0.943 0.951 0.943 0.978 0.977 0.957 0.946 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
95. Y57G11C.16 rps-18 76576 7.632 0.951 0.938 0.949 0.938 0.959 0.948 0.971 0.978 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
96. T11G6.1 hars-1 7908 7.631 0.956 0.960 0.972 0.960 0.954 0.941 0.932 0.956 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
97. F39H11.5 pbs-7 13631 7.63 0.932 0.953 0.932 0.953 0.979 0.963 0.963 0.955 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
98. Y56A3A.22 Y56A3A.22 2747 7.629 0.965 0.922 0.945 0.922 0.984 0.980 0.968 0.943
99. F45E4.2 plp-1 8601 7.629 0.937 0.972 0.967 0.972 0.989 0.940 0.915 0.937 Pur alpha Like Protein [Source:RefSeq peptide;Acc:NP_501241]
100. C34B2.6 C34B2.6 7529 7.629 0.934 0.968 0.965 0.968 0.980 0.915 0.946 0.953 Lon protease homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44952]

There are 1908 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA