C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for D2089.1

Gene ID Gene Name Reads Transcripts Annotation
D2089.1 rsp-7 11057 D2089.1a, D2089.1b.1, D2089.1b.2, D2089.1b.3 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]

Genes with expression patterns similar to D2089.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2089.1 rsp-7 11057 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
2. Y61A9LA.8 sut-2 11388 7.778 0.958 0.969 0.979 0.969 0.969 0.981 0.966 0.987 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
3. F18E2.3 scc-3 13464 7.764 0.966 0.981 0.983 0.981 0.978 0.969 0.964 0.942 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
4. F41E6.4 smk-1 22394 7.761 0.962 0.977 0.984 0.977 0.977 0.983 0.960 0.941 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
5. Y48G8AL.6 smg-2 12561 7.756 0.966 0.973 0.974 0.973 0.976 0.992 0.956 0.946 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
6. R07G3.5 pgam-5 11646 7.755 0.950 0.979 0.986 0.979 0.972 0.976 0.945 0.968 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
7. T04A8.14 emb-5 11746 7.744 0.967 0.987 0.977 0.987 0.945 0.970 0.955 0.956 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
8. T06D8.6 cchl-1 26292 7.741 0.955 0.973 0.982 0.973 0.988 0.968 0.955 0.947 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
9. Y38A8.2 pbs-3 18117 7.741 0.963 0.980 0.972 0.980 0.985 0.968 0.951 0.942 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
10. K08D12.1 pbs-1 21677 7.741 0.964 0.982 0.986 0.982 0.969 0.959 0.937 0.962 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
11. T01G1.3 sec-31 10504 7.739 0.949 0.978 0.967 0.978 0.984 0.986 0.934 0.963 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
12. Y81G3A.3 gcn-2 5831 7.735 0.956 0.975 0.953 0.975 0.974 0.989 0.966 0.947 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
13. F28B3.7 him-1 18274 7.735 0.964 0.981 0.980 0.981 0.956 0.978 0.923 0.972 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
14. F46B6.3 smg-4 4959 7.732 0.964 0.982 0.969 0.982 0.957 0.962 0.962 0.954 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
15. T10C6.4 srx-44 8454 7.731 0.954 0.977 0.976 0.977 0.984 0.981 0.936 0.946 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
16. Y73F8A.34 tag-349 7966 7.731 0.961 0.972 0.978 0.972 0.955 0.974 0.954 0.965
17. T07D4.3 rha-1 5898 7.73 0.928 0.982 0.973 0.982 0.977 0.972 0.962 0.954 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
18. Y54E10A.9 vbh-1 28746 7.73 0.943 0.984 0.964 0.984 0.973 0.967 0.949 0.966 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
19. Y116A8C.35 uaf-2 13808 7.728 0.944 0.975 0.981 0.975 0.986 0.956 0.953 0.958 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
20. F39B2.10 dnj-12 35162 7.725 0.937 0.972 0.976 0.972 0.983 0.992 0.961 0.932 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
21. F10G8.3 rae-1 7542 7.723 0.938 0.975 0.981 0.975 0.965 0.974 0.970 0.945 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
22. CD4.6 pas-6 18332 7.72 0.957 0.973 0.985 0.973 0.962 0.961 0.957 0.952 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
23. K12D12.1 top-2 18694 7.72 0.967 0.980 0.962 0.980 0.974 0.971 0.925 0.961 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
24. F28D9.1 rsr-1 4282 7.717 0.968 0.976 0.978 0.976 0.962 0.978 0.930 0.949 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
25. C36B1.8 gls-1 8617 7.716 0.968 0.968 0.967 0.968 0.963 0.977 0.958 0.947 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
26. F58B6.3 par-2 3914 7.714 0.962 0.965 0.960 0.965 0.989 0.975 0.957 0.941
27. C05C8.4 gei-6 6026 7.713 0.982 0.969 0.954 0.969 0.975 0.980 0.939 0.945 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
28. C43E11.1 acin-1 7781 7.713 0.956 0.979 0.984 0.979 0.962 0.965 0.954 0.934 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
29. Y113G7B.23 swsn-1 13766 7.713 0.951 0.977 0.962 0.977 0.970 0.972 0.934 0.970 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
30. T12D8.2 drr-2 16208 7.711 0.952 0.950 0.972 0.950 0.979 0.981 0.952 0.975 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
31. F37E3.1 ncbp-1 5649 7.711 0.970 0.971 0.975 0.971 0.943 0.972 0.952 0.957 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
32. T10F2.4 prp-19 11298 7.71 0.964 0.971 0.985 0.971 0.957 0.976 0.948 0.938 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
33. D1054.14 prp-38 6504 7.71 0.943 0.981 0.971 0.981 0.979 0.973 0.899 0.983 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
34. C50C3.6 prp-8 19582 7.71 0.943 0.963 0.973 0.963 0.973 0.979 0.949 0.967 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
35. Y71F9B.16 dnj-30 4262 7.709 0.930 0.972 0.982 0.972 0.960 0.975 0.947 0.971 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
36. Y71D11A.2 smr-1 4976 7.709 0.964 0.965 0.974 0.965 0.978 0.978 0.935 0.950 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
37. F01G4.3 skih-2 3353 7.708 0.944 0.973 0.974 0.973 0.969 0.966 0.960 0.949 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
38. F39H11.5 pbs-7 13631 7.707 0.969 0.980 0.980 0.980 0.975 0.964 0.929 0.930 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
39. F46A9.4 skr-2 16831 7.705 0.960 0.959 0.981 0.959 0.972 0.968 0.945 0.961 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
40. C09G4.1 hyl-1 8815 7.702 0.951 0.965 0.969 0.965 0.975 0.977 0.940 0.960 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
41. C18D11.4 rsp-8 18308 7.701 0.965 0.952 0.962 0.952 0.978 0.979 0.943 0.970 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
42. C03D6.4 npp-14 4889 7.7 0.929 0.970 0.961 0.970 0.978 0.979 0.943 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
43. F35G12.8 smc-4 6202 7.698 0.961 0.977 0.972 0.977 0.964 0.975 0.948 0.924 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
44. ZK381.4 pgl-1 20651 7.697 0.947 0.989 0.978 0.989 0.950 0.949 0.952 0.943 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
45. F10B5.6 emb-27 2578 7.696 0.973 0.957 0.949 0.957 0.983 0.971 0.936 0.970 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
46. K01C8.10 cct-4 15077 7.695 0.958 0.968 0.962 0.968 0.959 0.959 0.964 0.957 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
47. T27D1.1 cyn-9 2940 7.694 0.955 0.954 0.948 0.954 0.974 0.974 0.985 0.950 Peptidyl-prolyl cis-trans isomerase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q09637]
48. C17E4.5 pabp-2 12843 7.693 0.943 0.974 0.982 0.974 0.983 0.967 0.935 0.935 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
49. T05F1.6 hsr-9 13312 7.691 0.976 0.975 0.978 0.975 0.964 0.953 0.924 0.946
50. T20H4.4 adr-2 5495 7.691 0.936 0.975 0.972 0.975 0.976 0.966 0.965 0.926 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
51. Y55D9A.1 efa-6 10012 7.691 0.943 0.968 0.980 0.968 0.968 0.974 0.975 0.915 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
52. C52E4.6 cyl-1 6405 7.69 0.957 0.984 0.967 0.984 0.956 0.978 0.927 0.937 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
53. D1081.9 D1081.9 3792 7.689 0.942 0.963 0.983 0.963 0.980 0.978 0.942 0.938
54. F16D3.2 rsd-6 8211 7.689 0.935 0.968 0.983 0.968 0.974 0.971 0.965 0.925
55. F36F2.3 rbpl-1 15376 7.688 0.913 0.976 0.972 0.976 0.972 0.974 0.961 0.944 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
56. W03F9.5 ttb-1 8682 7.688 0.954 0.984 0.975 0.984 0.970 0.975 0.937 0.909 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
57. F58G11.1 letm-1 13414 7.688 0.968 0.969 0.968 0.969 0.963 0.968 0.963 0.920 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
58. M106.1 mix-1 7950 7.687 0.945 0.983 0.972 0.983 0.964 0.941 0.965 0.934 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
59. K02F2.1 dpf-3 11465 7.687 0.973 0.964 0.983 0.964 0.981 0.992 0.962 0.868 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
60. Y47G6A.20 rnp-6 5542 7.687 0.941 0.977 0.964 0.977 0.973 0.984 0.920 0.951 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
61. C08B11.6 arp-6 4646 7.687 0.963 0.953 0.975 0.953 0.971 0.977 0.960 0.935 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
62. T01G9.4 npp-2 5361 7.686 0.941 0.980 0.967 0.980 0.970 0.939 0.945 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
63. Y105E8A.17 ekl-4 4732 7.686 0.953 0.977 0.965 0.977 0.960 0.959 0.939 0.956
64. Y65B4BL.2 deps-1 18277 7.686 0.967 0.983 0.988 0.983 0.939 0.945 0.926 0.955
65. F59B2.7 rab-6.1 10749 7.685 0.948 0.951 0.977 0.951 0.988 0.967 0.939 0.964 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
66. F22D6.3 nars-1 18624 7.682 0.930 0.984 0.972 0.984 0.964 0.950 0.921 0.977 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
67. C36B1.4 pas-4 13140 7.682 0.936 0.970 0.956 0.970 0.984 0.982 0.965 0.919 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
68. T10F2.3 ulp-1 8351 7.682 0.953 0.971 0.952 0.971 0.978 0.963 0.957 0.937 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
69. R01H2.6 ubc-18 13394 7.682 0.950 0.977 0.954 0.977 0.972 0.958 0.951 0.943 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
70. C18G1.4 pgl-3 5291 7.681 0.974 0.961 0.966 0.961 0.981 0.958 0.930 0.950 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
71. F56A8.6 cpf-2 2730 7.681 0.960 0.954 0.969 0.954 0.964 0.978 0.960 0.942 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
72. W01B6.9 ndc-80 4670 7.681 0.955 0.976 0.972 0.976 0.969 0.958 0.933 0.942 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
73. T10F2.1 gars-1 7204 7.679 0.928 0.960 0.978 0.960 0.978 0.991 0.911 0.973 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
74. C47D12.6 tars-1 23488 7.678 0.963 0.962 0.953 0.962 0.972 0.961 0.947 0.958 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
75. F32A5.1 ada-2 8343 7.677 0.960 0.982 0.972 0.982 0.953 0.976 0.955 0.897 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
76. T27F2.1 skp-1 3532 7.676 0.970 0.976 0.986 0.976 0.951 0.964 0.902 0.951 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
77. T20H4.3 pars-1 8167 7.675 0.928 0.957 0.974 0.957 0.992 0.984 0.926 0.957 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
78. B0334.5 B0334.5 4713 7.675 0.925 0.966 0.955 0.966 0.979 0.964 0.960 0.960
79. Y40B1B.5 eif-3.J 15061 7.675 0.944 0.973 0.968 0.973 0.969 0.969 0.926 0.953 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
80. C13B4.2 usp-14 9000 7.674 0.970 0.969 0.966 0.969 0.977 0.927 0.943 0.953 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
81. F52C9.8 pqe-1 7546 7.673 0.952 0.976 0.971 0.976 0.982 0.975 0.940 0.901 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
82. F35G12.2 idhg-1 30065 7.672 0.939 0.963 0.976 0.963 0.983 0.970 0.945 0.933 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
83. C29E4.2 kle-2 5527 7.671 0.958 0.961 0.949 0.961 0.981 0.981 0.939 0.941 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
84. ZK328.5 npp-10 7652 7.671 0.938 0.974 0.982 0.974 0.988 0.966 0.934 0.915 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
85. C36B1.3 rpb-3 4442 7.671 0.933 0.975 0.978 0.975 0.963 0.970 0.911 0.966 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
86. ZC404.9 gck-2 8382 7.671 0.958 0.978 0.984 0.978 0.973 0.955 0.941 0.904 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
87. C53D5.6 imb-3 28921 7.67 0.931 0.978 0.973 0.978 0.974 0.959 0.926 0.951 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
88. C07G1.4 wsp-1 11226 7.67 0.957 0.975 0.984 0.975 0.946 0.972 0.938 0.923 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
89. C39E9.13 rfc-3 9443 7.669 0.952 0.971 0.970 0.971 0.972 0.939 0.930 0.964 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
90. T17E9.2 nmt-1 8017 7.669 0.917 0.974 0.956 0.974 0.974 0.973 0.940 0.961 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
91. F56A3.3 npp-6 5425 7.669 0.956 0.967 0.979 0.967 0.949 0.980 0.924 0.947 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
92. Y49E10.19 ani-1 12757 7.668 0.971 0.982 0.978 0.982 0.950 0.948 0.925 0.932 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
93. ZK20.3 rad-23 35070 7.665 0.968 0.969 0.984 0.969 0.966 0.954 0.916 0.939
94. C25A1.5 C25A1.5 9135 7.665 0.962 0.947 0.976 0.947 0.980 0.981 0.936 0.936
95. Y67H2A.6 csn-6 3098 7.665 0.928 0.967 0.959 0.967 0.985 0.967 0.951 0.941 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
96. T12D8.8 hip-1 18283 7.664 0.938 0.951 0.959 0.951 0.980 0.972 0.945 0.968 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
97. R06F6.5 npp-19 5067 7.664 0.904 0.970 0.976 0.970 0.989 0.959 0.943 0.953 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
98. Y43C5A.6 rad-51 5327 7.664 0.938 0.957 0.964 0.957 0.984 0.964 0.949 0.951 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
99. E01A2.4 let-504 9788 7.663 0.955 0.982 0.976 0.982 0.935 0.965 0.921 0.947
100. Y38C1AA.2 csn-3 3451 7.662 0.965 0.971 0.980 0.971 0.935 0.990 0.922 0.928 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]

There are 3227 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA