C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y116A8C.35

Gene ID Gene Name Reads Transcripts Annotation
Y116A8C.35 uaf-2 13808 Y116A8C.35a, Y116A8C.35b.1, Y116A8C.35b.2 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]

Genes with expression patterns similar to Y116A8C.35

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y116A8C.35 uaf-2 13808 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
2. T12D8.8 hip-1 18283 7.816 0.979 0.968 0.966 0.968 0.989 0.985 0.979 0.982 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
3. F42A6.7 hrp-1 28201 7.803 0.980 0.980 0.976 0.980 0.977 0.981 0.938 0.991 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
4. Y111B2A.18 rsp-3 43731 7.8 0.973 0.975 0.968 0.975 0.986 0.980 0.960 0.983 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
5. Y40B1B.5 eif-3.J 15061 7.786 0.982 0.973 0.976 0.973 0.984 0.972 0.962 0.964 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
6. Y102A5A.1 cand-1 11808 7.78 0.948 0.979 0.981 0.979 0.977 0.970 0.961 0.985 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
7. C47D12.6 tars-1 23488 7.772 0.963 0.968 0.974 0.968 0.985 0.981 0.957 0.976 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
8. C18D11.4 rsp-8 18308 7.768 0.961 0.975 0.978 0.975 0.989 0.963 0.970 0.957 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
9. F39B2.10 dnj-12 35162 7.76 0.973 0.983 0.969 0.983 0.972 0.965 0.972 0.943 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
10. Y54E10A.9 vbh-1 28746 7.759 0.964 0.968 0.969 0.968 0.978 0.985 0.963 0.964 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
11. Y61A9LA.8 sut-2 11388 7.759 0.965 0.981 0.966 0.981 0.978 0.963 0.955 0.970 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
12. T06D8.6 cchl-1 26292 7.751 0.962 0.990 0.994 0.990 0.968 0.933 0.950 0.964 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
13. C53D5.6 imb-3 28921 7.748 0.966 0.979 0.976 0.979 0.982 0.964 0.940 0.962 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
14. F26F4.10 rars-1 9971 7.747 0.967 0.960 0.976 0.960 0.988 0.980 0.954 0.962 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
15. T12D8.2 drr-2 16208 7.747 0.962 0.959 0.982 0.959 0.977 0.959 0.966 0.983 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
16. F22D6.3 nars-1 18624 7.746 0.969 0.980 0.957 0.980 0.987 0.952 0.951 0.970 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
17. C47B2.4 pbs-2 19805 7.745 0.959 0.982 0.977 0.982 0.978 0.952 0.963 0.952 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
18. F36A4.7 ama-1 13620 7.742 0.914 0.970 0.979 0.970 0.986 0.988 0.958 0.977 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
19. Y71D11A.2 smr-1 4976 7.74 0.965 0.979 0.962 0.979 0.985 0.934 0.953 0.983 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
20. H19N07.1 erfa-3 19869 7.74 0.967 0.977 0.984 0.977 0.977 0.978 0.962 0.918 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
21. K08D12.1 pbs-1 21677 7.736 0.974 0.981 0.966 0.981 0.965 0.960 0.941 0.968 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
22. R07G3.5 pgam-5 11646 7.735 0.964 0.974 0.990 0.974 0.976 0.967 0.955 0.935 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
23. Y113G7B.23 swsn-1 13766 7.734 0.967 0.963 0.950 0.963 0.981 0.967 0.966 0.977 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
24. T10F2.4 prp-19 11298 7.731 0.971 0.974 0.983 0.974 0.980 0.940 0.949 0.960 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
25. ZK616.6 perm-3 16186 7.729 0.957 0.977 0.975 0.977 0.982 0.959 0.957 0.945 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
26. D2089.1 rsp-7 11057 7.728 0.944 0.975 0.981 0.975 0.986 0.956 0.953 0.958 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
27. T17E9.2 nmt-1 8017 7.725 0.959 0.980 0.967 0.980 0.988 0.933 0.946 0.972 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
28. Y48G8AL.6 smg-2 12561 7.721 0.946 0.961 0.960 0.961 0.971 0.976 0.968 0.978 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
29. F10G8.3 rae-1 7542 7.72 0.952 0.982 0.967 0.982 0.983 0.936 0.958 0.960 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
30. Y38A8.2 pbs-3 18117 7.72 0.953 0.973 0.958 0.973 0.975 0.966 0.971 0.951 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
31. T16G1.11 eif-3.K 14014 7.717 0.978 0.971 0.962 0.971 0.972 0.950 0.946 0.967 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
32. K04G2.1 iftb-1 12590 7.715 0.946 0.971 0.958 0.971 0.982 0.977 0.965 0.945 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
33. CD4.6 pas-6 18332 7.714 0.965 0.981 0.964 0.981 0.965 0.957 0.942 0.959 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
34. T27F7.3 eif-1 28176 7.714 0.956 0.952 0.965 0.952 0.987 0.987 0.967 0.948 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
35. K01C8.10 cct-4 15077 7.713 0.967 0.975 0.971 0.975 0.960 0.946 0.969 0.950 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
36. C26D10.2 hel-1 28697 7.708 0.959 0.968 0.969 0.968 0.974 0.931 0.964 0.975 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
37. F38H4.7 tag-30 4315 7.705 0.958 0.969 0.980 0.969 0.973 0.960 0.947 0.949
38. C43E11.1 acin-1 7781 7.703 0.952 0.970 0.960 0.970 0.978 0.950 0.954 0.969 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
39. F45H11.2 ned-8 13247 7.703 0.965 0.949 0.932 0.949 0.991 0.969 0.973 0.975 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
40. C33H5.12 rsp-6 23342 7.699 0.970 0.979 0.974 0.979 0.964 0.940 0.914 0.979 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
41. K08F11.3 cif-1 10218 7.698 0.979 0.952 0.961 0.952 0.978 0.964 0.947 0.965 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
42. F33D11.11 vpr-1 18001 7.696 0.963 0.980 0.965 0.980 0.978 0.957 0.946 0.927 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
43. C50C3.6 prp-8 19582 7.695 0.937 0.968 0.952 0.968 0.986 0.961 0.960 0.963 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
44. D2013.7 eif-3.F 21004 7.694 0.948 0.951 0.957 0.951 0.993 0.968 0.944 0.982 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
45. B0464.1 dars-1 12331 7.693 0.946 0.959 0.959 0.959 0.987 0.982 0.958 0.943 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
46. T10F2.1 gars-1 7204 7.692 0.944 0.969 0.968 0.969 0.979 0.958 0.940 0.965 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
47. F08F8.3 kap-1 31437 7.691 0.960 0.976 0.978 0.976 0.981 0.946 0.936 0.938 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
48. C08B11.5 sap-49 10553 7.689 0.961 0.979 0.978 0.979 0.980 0.936 0.938 0.938 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
49. C18A3.5 tiar-1 25400 7.688 0.971 0.989 0.990 0.989 0.966 0.951 0.908 0.924 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
50. F35G12.2 idhg-1 30065 7.688 0.969 0.971 0.973 0.971 0.975 0.936 0.953 0.940 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
51. B0025.2 csn-2 5205 7.688 0.941 0.966 0.960 0.966 0.978 0.976 0.953 0.948 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
52. T01G1.3 sec-31 10504 7.688 0.926 0.968 0.964 0.968 0.989 0.980 0.930 0.963 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
53. B0205.7 kin-3 29775 7.688 0.965 0.962 0.965 0.962 0.954 0.965 0.963 0.952 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
54. T20H4.3 pars-1 8167 7.687 0.930 0.947 0.959 0.947 0.981 0.980 0.964 0.979 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
55. K01G5.4 ran-1 32379 7.687 0.973 0.978 0.972 0.978 0.959 0.955 0.898 0.974 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
56. F41E6.4 smk-1 22394 7.686 0.934 0.981 0.967 0.981 0.966 0.953 0.953 0.951 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
57. F46A9.4 skr-2 16831 7.685 0.968 0.954 0.973 0.954 0.980 0.943 0.940 0.973 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
58. Y39G10AR.9 Y39G10AR.9 3972 7.684 0.949 0.963 0.946 0.963 0.988 0.957 0.942 0.976
59. C34E10.5 prmt-5 12277 7.684 0.954 0.974 0.983 0.974 0.958 0.949 0.936 0.956 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
60. C06E7.1 sams-3 26921 7.684 0.954 0.969 0.955 0.969 0.982 0.960 0.933 0.962 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
61. T10C6.4 srx-44 8454 7.683 0.953 0.979 0.959 0.979 0.990 0.931 0.941 0.951 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
62. T04A8.14 emb-5 11746 7.683 0.939 0.978 0.970 0.978 0.973 0.962 0.955 0.928 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
63. Y47G6A.20 rnp-6 5542 7.683 0.977 0.964 0.933 0.964 0.973 0.962 0.932 0.978 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
64. B0511.10 eif-3.E 10041 7.682 0.952 0.966 0.925 0.966 0.984 0.973 0.958 0.958 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
65. C08B11.7 ubh-4 3186 7.682 0.960 0.964 0.972 0.964 0.969 0.958 0.927 0.968 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
66. C36B1.4 pas-4 13140 7.68 0.943 0.981 0.959 0.981 0.974 0.941 0.943 0.958 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
67. K07A12.7 mrps-15 6325 7.679 0.944 0.961 0.938 0.961 0.981 0.980 0.941 0.973 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
68. F37E3.1 ncbp-1 5649 7.676 0.951 0.976 0.964 0.976 0.958 0.959 0.948 0.944 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
69. Y73B6BL.6 sqd-1 41708 7.674 0.949 0.978 0.964 0.978 0.969 0.955 0.953 0.928 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
70. C15H11.4 dhs-22 21674 7.672 0.948 0.975 0.967 0.975 0.984 0.961 0.932 0.930 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
71. W03F9.5 ttb-1 8682 7.672 0.953 0.984 0.964 0.984 0.962 0.946 0.937 0.942 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
72. F57B9.5 byn-1 58236 7.67 0.955 0.956 0.918 0.956 0.982 0.968 0.958 0.977 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
73. C41D11.2 eif-3.H 7520 7.67 0.934 0.950 0.966 0.950 0.984 0.981 0.936 0.969 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
74. M7.1 let-70 85699 7.67 0.961 0.974 0.984 0.974 0.949 0.933 0.956 0.939 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
75. Y34D9A.1 mrpl-38 5291 7.67 0.960 0.958 0.975 0.958 0.985 0.957 0.933 0.944 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
76. F39H11.5 pbs-7 13631 7.669 0.935 0.977 0.962 0.977 0.966 0.957 0.946 0.949 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
77. F56B3.12 skr-18 6534 7.668 0.939 0.955 0.961 0.955 0.975 0.948 0.948 0.987 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
78. H06H21.3 eif-1.A 40990 7.668 0.955 0.965 0.953 0.965 0.959 0.969 0.960 0.942 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
79. R05D11.3 ran-4 15494 7.667 0.972 0.979 0.978 0.979 0.967 0.943 0.930 0.919 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
80. K11D12.2 pqn-51 15951 7.665 0.958 0.977 0.974 0.977 0.968 0.973 0.898 0.940 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
81. ZK381.4 pgl-1 20651 7.664 0.938 0.975 0.968 0.975 0.958 0.935 0.956 0.959 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
82. T08B2.9 fars-1 12650 7.663 0.948 0.966 0.959 0.966 0.956 0.970 0.950 0.948 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
83. W02B12.3 rsp-1 9235 7.663 0.979 0.964 0.984 0.964 0.948 0.930 0.932 0.962 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
84. Y56A3A.1 ntl-3 10450 7.662 0.937 0.983 0.948 0.983 0.964 0.959 0.950 0.938 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
85. K10D2.3 cid-1 7175 7.661 0.935 0.984 0.966 0.984 0.987 0.933 0.921 0.951 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
86. F13G3.4 dylt-1 21345 7.661 0.951 0.968 0.971 0.968 0.967 0.952 0.933 0.951 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
87. T23D8.4 eif-3.C 15343 7.661 0.934 0.949 0.956 0.949 0.976 0.952 0.956 0.989 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
88. T01G9.6 kin-10 27360 7.66 0.966 0.968 0.958 0.968 0.970 0.964 0.942 0.924 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
89. W09C5.7 W09C5.7 2359 7.659 0.957 0.919 0.957 0.919 0.982 0.986 0.960 0.979
90. Y65B4BR.5 icd-2 58321 7.659 0.943 0.939 0.955 0.939 0.965 0.982 0.953 0.983 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
91. F01G4.3 skih-2 3353 7.659 0.918 0.973 0.972 0.973 0.967 0.972 0.945 0.939 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
92. C27D11.1 egl-45 28282 7.658 0.944 0.942 0.967 0.942 0.967 0.955 0.978 0.963 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
93. C52E4.6 cyl-1 6405 7.657 0.958 0.984 0.944 0.984 0.978 0.946 0.926 0.937 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
94. R13F6.10 cra-1 11610 7.657 0.956 0.975 0.953 0.975 0.972 0.959 0.909 0.958 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
95. F58D5.1 hrp-2 17211 7.656 0.980 0.964 0.960 0.964 0.963 0.953 0.902 0.970 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
96. T21C9.12 scpl-4 14723 7.656 0.941 0.966 0.944 0.966 0.981 0.955 0.925 0.978 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
97. F28D9.1 rsr-1 4282 7.655 0.918 0.980 0.971 0.980 0.962 0.943 0.940 0.961 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
98. DY3.1 tin-13 5225 7.654 0.934 0.955 0.953 0.955 0.964 0.976 0.930 0.987 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
99. Y105E8A.17 ekl-4 4732 7.654 0.942 0.971 0.964 0.971 0.957 0.974 0.907 0.968
100. Y71F9B.16 dnj-30 4262 7.654 0.953 0.958 0.943 0.958 0.969 0.949 0.952 0.972 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]

There are 2883 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA