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Results for F28H1.3

Gene ID Gene Name Reads Transcripts Annotation
F28H1.3 aars-2 13537 F28H1.3.1, F28H1.3.2, F28H1.3.3 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]

Genes with expression patterns similar to F28H1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28H1.3 aars-2 13537 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
2. ZK742.1 xpo-1 20741 7.857 0.971 0.987 0.983 0.987 0.988 0.985 0.973 0.983 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
3. T23H2.1 npp-12 12425 7.814 0.970 0.980 0.976 0.980 0.987 0.981 0.977 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
4. F42A6.7 hrp-1 28201 7.808 0.984 0.974 0.986 0.974 0.986 0.963 0.979 0.962 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
5. ZK1058.4 ccdc-47 8879 7.807 0.985 0.974 0.983 0.974 0.976 0.989 0.967 0.959 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
6. F58D5.1 hrp-2 17211 7.799 0.968 0.978 0.970 0.978 0.988 0.971 0.965 0.981 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
7. T16G1.11 eif-3.K 14014 7.798 0.970 0.977 0.978 0.977 0.978 0.992 0.968 0.958 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
8. T10B5.5 cct-7 24616 7.798 0.961 0.981 0.971 0.981 0.980 0.983 0.973 0.968 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
9. K01G5.4 ran-1 32379 7.796 0.978 0.976 0.957 0.976 0.993 0.982 0.962 0.972 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
10. W08E3.3 ola-1 20885 7.791 0.972 0.959 0.973 0.959 0.993 0.988 0.984 0.963 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
11. ZK863.6 dpy-30 16177 7.79 0.980 0.979 0.969 0.979 0.976 0.974 0.958 0.975 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
12. F58E10.3 ddx-17 15107 7.79 0.980 0.972 0.985 0.972 0.982 0.967 0.948 0.984 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
13. Y54E5A.4 npp-4 6288 7.789 0.963 0.973 0.980 0.973 0.989 0.961 0.969 0.981 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
14. K08F4.2 gtbp-1 25222 7.785 0.974 0.980 0.982 0.980 0.980 0.959 0.947 0.983 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
15. C26E6.4 rpb-2 7053 7.783 0.957 0.986 0.964 0.986 0.993 0.981 0.969 0.947 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
16. T11G6.1 hars-1 7908 7.78 0.968 0.968 0.978 0.968 0.983 0.985 0.965 0.965 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
17. C33H5.12 rsp-6 23342 7.778 0.979 0.974 0.982 0.974 0.983 0.974 0.941 0.971 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
18. T08B2.9 fars-1 12650 7.777 0.958 0.976 0.978 0.976 0.971 0.980 0.969 0.969 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
19. Y37E3.15 npp-13 7250 7.777 0.969 0.969 0.966 0.969 0.982 0.969 0.975 0.978 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
20. W02B12.3 rsp-1 9235 7.774 0.980 0.977 0.976 0.977 0.988 0.969 0.925 0.982 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
21. C08B11.5 sap-49 10553 7.772 0.980 0.977 0.975 0.977 0.985 0.973 0.950 0.955 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
22. F56D2.6 ddx-15 12282 7.768 0.943 0.977 0.980 0.977 0.989 0.973 0.949 0.980 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
23. F59E12.11 sam-4 8179 7.767 0.951 0.958 0.984 0.958 0.972 0.988 0.974 0.982
24. Y116A8C.42 snr-1 17062 7.766 0.956 0.978 0.970 0.978 0.978 0.963 0.968 0.975 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
25. K08E7.1 eak-7 18960 7.763 0.967 0.969 0.969 0.969 0.987 0.977 0.953 0.972 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
26. Y111B2A.18 rsp-3 43731 7.76 0.989 0.977 0.966 0.977 0.971 0.968 0.937 0.975 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
27. F32A5.7 lsm-4 3785 7.759 0.973 0.964 0.970 0.964 0.983 0.979 0.978 0.948 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
28. F13G3.4 dylt-1 21345 7.756 0.962 0.973 0.986 0.973 0.981 0.980 0.943 0.958 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
29. K11D12.2 pqn-51 15951 7.755 0.964 0.971 0.982 0.971 0.977 0.977 0.964 0.949 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
30. F23F1.1 nfyc-1 9983 7.751 0.979 0.975 0.965 0.975 0.971 0.961 0.950 0.975 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
31. C26D10.2 hel-1 28697 7.748 0.960 0.985 0.960 0.985 0.970 0.969 0.936 0.983 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
32. H21P03.1 mbf-1 25586 7.748 0.952 0.976 0.960 0.976 0.971 0.981 0.973 0.959 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
33. R07E5.14 rnp-4 11659 7.745 0.976 0.967 0.973 0.967 0.967 0.982 0.944 0.969 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
34. T10F2.4 prp-19 11298 7.745 0.975 0.984 0.970 0.984 0.980 0.946 0.943 0.963 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
35. Y34D9A.1 mrpl-38 5291 7.745 0.974 0.974 0.957 0.974 0.973 0.978 0.937 0.978 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
36. T17E9.2 nmt-1 8017 7.744 0.955 0.983 0.970 0.983 0.962 0.968 0.950 0.973 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
37. Y46G5A.4 snrp-200 13827 7.744 0.928 0.977 0.974 0.977 0.980 0.964 0.960 0.984 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
38. R12C12.2 ran-5 14517 7.744 0.971 0.964 0.956 0.964 0.985 0.969 0.955 0.980 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
39. F22B5.9 fars-3 7209 7.743 0.955 0.960 0.953 0.960 0.989 0.977 0.976 0.973 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
40. F32H2.1 snpc-4 7581 7.743 0.960 0.971 0.953 0.971 0.992 0.969 0.972 0.955 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
41. T01E8.6 mrps-14 9328 7.742 0.943 0.978 0.964 0.978 0.980 0.966 0.974 0.959 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
42. C25D7.8 otub-1 7941 7.741 0.968 0.959 0.974 0.959 0.991 0.958 0.955 0.977 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
43. F22D6.3 nars-1 18624 7.74 0.971 0.972 0.964 0.972 0.982 0.992 0.911 0.976 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
44. T21B10.1 mrpl-50 14595 7.74 0.973 0.989 0.976 0.989 0.952 0.976 0.955 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
45. T19B4.2 npp-7 13073 7.739 0.968 0.968 0.973 0.968 0.981 0.958 0.955 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
46. Y17G7A.1 hmg-12 29989 7.737 0.972 0.972 0.970 0.972 0.982 0.956 0.947 0.966 HMG [Source:RefSeq peptide;Acc:NP_496544]
47. F26F4.10 rars-1 9971 7.736 0.988 0.963 0.972 0.963 0.971 0.968 0.959 0.952 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
48. C15H11.4 dhs-22 21674 7.733 0.967 0.969 0.989 0.969 0.961 0.968 0.955 0.955 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
49. D2013.7 eif-3.F 21004 7.732 0.956 0.981 0.966 0.981 0.967 0.984 0.939 0.958 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
50. H19N07.1 erfa-3 19869 7.731 0.971 0.981 0.971 0.981 0.976 0.981 0.897 0.973 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
51. B0464.1 dars-1 12331 7.729 0.949 0.981 0.954 0.981 0.979 0.954 0.962 0.969 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
52. K08F11.3 cif-1 10218 7.728 0.971 0.970 0.947 0.970 0.984 0.973 0.959 0.954 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
53. Y41D4B.19 npp-8 12992 7.727 0.969 0.978 0.978 0.978 0.957 0.965 0.964 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
54. B0035.3 B0035.3 4118 7.727 0.963 0.954 0.975 0.954 0.983 0.979 0.952 0.967
55. H17B01.4 emc-1 9037 7.726 0.940 0.974 0.962 0.974 0.986 0.972 0.938 0.980 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
56. F33D4.5 mrpl-1 5337 7.725 0.934 0.964 0.979 0.964 0.974 0.979 0.948 0.983 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
57. F59A2.1 npp-9 34375 7.724 0.971 0.970 0.966 0.970 0.972 0.961 0.948 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
58. B0464.7 baf-1 10161 7.723 0.968 0.959 0.919 0.959 0.987 0.991 0.985 0.955 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
59. C18D11.4 rsp-8 18308 7.723 0.988 0.980 0.970 0.980 0.950 0.945 0.930 0.980 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
60. W06H3.3 ctps-1 8363 7.723 0.949 0.968 0.977 0.968 0.974 0.975 0.971 0.941 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
61. R09B3.5 mag-1 7496 7.721 0.965 0.965 0.967 0.965 0.967 0.988 0.965 0.939 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
62. R13F6.10 cra-1 11610 7.721 0.950 0.985 0.974 0.985 0.985 0.967 0.910 0.965 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
63. T06A10.4 lsy-13 7631 7.72 0.957 0.967 0.977 0.967 0.985 0.966 0.947 0.954
64. F36A2.1 cids-2 4551 7.719 0.972 0.976 0.951 0.976 0.969 0.958 0.959 0.958 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
65. F58B3.5 mars-1 6729 7.719 0.959 0.971 0.943 0.971 0.973 0.983 0.956 0.963 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
66. C27H5.3 fust-1 6978 7.718 0.974 0.970 0.952 0.970 0.980 0.974 0.947 0.951 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
67. C27B7.1 spr-2 14958 7.715 0.965 0.960 0.971 0.960 0.992 0.956 0.935 0.976 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
68. F32E10.6 cec-5 10643 7.715 0.981 0.978 0.966 0.978 0.983 0.950 0.919 0.960 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
69. F53F10.5 npp-11 3378 7.713 0.967 0.957 0.967 0.957 0.988 0.960 0.964 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
70. C34E10.5 prmt-5 12277 7.713 0.954 0.979 0.975 0.979 0.977 0.964 0.949 0.936 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
71. C52E4.6 cyl-1 6405 7.713 0.975 0.970 0.949 0.970 0.961 0.962 0.954 0.972 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
72. Y38A8.3 ulp-2 7403 7.712 0.961 0.960 0.970 0.960 0.987 0.960 0.946 0.968 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
73. B0205.11 mrpl-9 9162 7.71 0.920 0.964 0.972 0.964 0.987 0.977 0.972 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
74. F43G9.9 cpn-1 14505 7.709 0.961 0.952 0.980 0.952 0.982 0.955 0.965 0.962 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
75. Y71G12B.9 lin-65 7476 7.708 0.951 0.975 0.974 0.975 0.965 0.965 0.943 0.960 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
76. C18A3.5 tiar-1 25400 7.707 0.977 0.978 0.973 0.978 0.969 0.977 0.923 0.932 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
77. T02G5.9 kars-1 9763 7.707 0.944 0.968 0.949 0.968 0.986 0.975 0.960 0.957 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
78. T28D9.2 rsp-5 6460 7.706 0.968 0.968 0.972 0.968 0.959 0.935 0.966 0.970 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
79. Y40B1B.5 eif-3.J 15061 7.705 0.977 0.981 0.969 0.981 0.959 0.969 0.916 0.953 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
80. T21B10.7 cct-2 13999 7.703 0.983 0.984 0.972 0.984 0.964 0.964 0.930 0.922 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
81. Y43F4B.4 npp-18 4780 7.703 0.948 0.959 0.954 0.959 0.963 0.985 0.975 0.960 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
82. C06A1.5 rpb-6 7515 7.702 0.966 0.968 0.967 0.968 0.975 0.966 0.966 0.926 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
83. Y62E10A.11 mdt-9 5971 7.702 0.959 0.972 0.961 0.972 0.959 0.973 0.969 0.937 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
84. Y53C12B.3 nos-3 20231 7.702 0.951 0.978 0.969 0.978 0.972 0.932 0.959 0.963 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
85. F08F8.3 kap-1 31437 7.702 0.969 0.981 0.960 0.981 0.952 0.962 0.954 0.943 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
86. R05D11.3 ran-4 15494 7.701 0.974 0.970 0.973 0.970 0.964 0.974 0.926 0.950 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
87. Y37D8A.9 mrg-1 14369 7.7 0.966 0.967 0.961 0.967 0.970 0.971 0.944 0.954 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
88. Y23H5B.6 Y23H5B.6 5886 7.699 0.952 0.968 0.963 0.968 0.974 0.950 0.958 0.966
89. ZK550.4 ZK550.4 5815 7.699 0.924 0.963 0.967 0.963 0.988 0.970 0.950 0.974 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
90. T24H7.1 phb-2 28775 7.698 0.951 0.980 0.869 0.980 0.990 0.987 0.962 0.979 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
91. T05H4.6 erfa-1 12542 7.696 0.946 0.961 0.967 0.961 0.959 0.976 0.964 0.962 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
92. T25G3.4 T25G3.4 9394 7.695 0.948 0.971 0.971 0.971 0.971 0.973 0.940 0.950 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
93. F28B3.8 imb-1 7515 7.694 0.949 0.986 0.959 0.986 0.969 0.934 0.966 0.945 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
94. F02E9.9 dpt-1 5401 7.694 0.969 0.979 0.983 0.979 0.961 0.957 0.909 0.957 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
95. C47B2.9 C47B2.9 4096 7.693 0.962 0.955 0.962 0.955 0.990 0.986 0.929 0.954
96. B0261.4 mrpl-47 8210 7.692 0.927 0.965 0.951 0.965 0.992 0.990 0.965 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
97. K12C11.2 smo-1 12784 7.69 0.967 0.968 0.933 0.968 0.992 0.944 0.970 0.948 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
98. Y73B6BL.33 hrpf-2 4443 7.69 0.973 0.977 0.979 0.977 0.981 0.918 0.938 0.947 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
99. ZK616.6 perm-3 16186 7.689 0.967 0.969 0.962 0.969 0.974 0.975 0.928 0.945 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
100. K02F3.11 rnp-5 6205 7.686 0.965 0.978 0.960 0.978 0.957 0.963 0.925 0.960 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA