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Results for C08B11.5

Gene ID Gene Name Reads Transcripts Annotation
C08B11.5 sap-49 10553 C08B11.5 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]

Genes with expression patterns similar to C08B11.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C08B11.5 sap-49 10553 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
2. T17E9.2 nmt-1 8017 7.808 0.969 0.979 0.977 0.979 0.980 0.989 0.975 0.960 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
3. Y54E5A.4 npp-4 6288 7.806 0.973 0.987 0.963 0.987 0.985 0.983 0.970 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
4. T10F2.4 prp-19 11298 7.805 0.977 0.974 0.975 0.974 0.991 0.961 0.984 0.969 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
5. F42A6.7 hrp-1 28201 7.805 0.986 0.977 0.986 0.977 0.989 0.959 0.982 0.949 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
6. T19B4.2 npp-7 13073 7.799 0.971 0.990 0.972 0.990 0.984 0.972 0.956 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
7. K11D12.2 pqn-51 15951 7.794 0.973 0.989 0.983 0.989 0.988 0.972 0.944 0.956 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
8. K01G5.4 ran-1 32379 7.778 0.975 0.977 0.958 0.977 0.987 0.975 0.969 0.960 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
9. Y17G7A.1 hmg-12 29989 7.777 0.982 0.974 0.965 0.974 0.968 0.974 0.985 0.955 HMG [Source:RefSeq peptide;Acc:NP_496544]
10. C53D5.6 imb-3 28921 7.775 0.959 0.971 0.983 0.971 0.986 0.941 0.981 0.983 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
11. C27B7.1 spr-2 14958 7.774 0.964 0.977 0.953 0.977 0.988 0.977 0.982 0.956 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
12. C26D10.2 hel-1 28697 7.774 0.963 0.970 0.977 0.970 0.978 0.977 0.983 0.956 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
13. Y111B2A.18 rsp-3 43731 7.773 0.989 0.973 0.960 0.973 0.992 0.960 0.974 0.952 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
14. F28H1.3 aars-2 13537 7.772 0.980 0.977 0.975 0.977 0.985 0.973 0.950 0.955 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
15. W02B12.3 rsp-1 9235 7.77 0.980 0.973 0.970 0.973 0.979 0.987 0.969 0.939 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
16. F32A5.7 lsm-4 3785 7.769 0.978 0.981 0.970 0.981 0.985 0.969 0.959 0.946 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
17. T01E8.6 mrps-14 9328 7.769 0.960 0.972 0.975 0.972 0.975 0.973 0.978 0.964 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
18. F22D6.3 nars-1 18624 7.768 0.973 0.975 0.959 0.975 0.993 0.984 0.961 0.948 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
19. F56F3.1 ifet-1 25772 7.762 0.958 0.957 0.968 0.957 0.976 0.988 0.974 0.984 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
20. ZK1127.4 ZK1127.4 3088 7.762 0.954 0.966 0.969 0.966 0.988 0.970 0.978 0.971 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
21. ZK742.1 xpo-1 20741 7.761 0.955 0.981 0.968 0.981 0.984 0.980 0.950 0.962 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
22. F56D1.7 daz-1 23684 7.757 0.965 0.972 0.970 0.972 0.982 0.951 0.971 0.974 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
23. F32E10.6 cec-5 10643 7.754 0.974 0.968 0.971 0.968 0.988 0.971 0.968 0.946 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
24. ZK1058.4 ccdc-47 8879 7.751 0.982 0.967 0.979 0.967 0.983 0.968 0.957 0.948 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
25. Y54H5A.3 tag-262 4269 7.751 0.982 0.972 0.943 0.972 0.985 0.988 0.973 0.936
26. C52E4.6 cyl-1 6405 7.75 0.981 0.979 0.938 0.979 0.982 0.992 0.971 0.928 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
27. C34E10.5 prmt-5 12277 7.749 0.942 0.969 0.982 0.969 0.980 0.978 0.985 0.944 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
28. K02F3.11 rnp-5 6205 7.749 0.964 0.975 0.954 0.975 0.973 0.990 0.959 0.959 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
29. C18D11.4 rsp-8 18308 7.748 0.980 0.980 0.983 0.980 0.979 0.949 0.972 0.925 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
30. F53F10.5 npp-11 3378 7.748 0.958 0.978 0.958 0.978 0.979 0.976 0.944 0.977 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
31. F23F1.1 nfyc-1 9983 7.746 0.970 0.971 0.954 0.971 0.967 0.981 0.976 0.956 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
32. T12D8.3 acbp-5 6816 7.744 0.961 0.981 0.933 0.981 0.984 0.943 0.982 0.979 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
33. C26E6.4 rpb-2 7053 7.744 0.943 0.974 0.974 0.974 0.980 0.985 0.963 0.951 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
34. F56D2.6 ddx-15 12282 7.743 0.926 0.975 0.974 0.975 0.976 0.971 0.967 0.979 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
35. Y34D9A.1 mrpl-38 5291 7.742 0.975 0.971 0.956 0.971 0.985 0.987 0.981 0.916 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
36. R12C12.2 ran-5 14517 7.738 0.979 0.984 0.956 0.984 0.969 0.963 0.969 0.934 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
37. Y110A7A.8 prp-31 4436 7.738 0.943 0.986 0.922 0.986 0.985 0.974 0.971 0.971 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
38. T23H2.1 npp-12 12425 7.737 0.954 0.976 0.965 0.976 0.967 0.979 0.969 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
39. K08F11.3 cif-1 10218 7.737 0.969 0.952 0.961 0.952 0.992 0.967 0.987 0.957 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
40. T06A10.4 lsy-13 7631 7.736 0.966 0.974 0.971 0.974 0.987 0.992 0.959 0.913
41. C02B10.5 C02B10.5 9171 7.735 0.969 0.945 0.968 0.945 0.972 0.988 0.988 0.960
42. ZK616.6 perm-3 16186 7.733 0.979 0.971 0.964 0.971 0.986 0.984 0.962 0.916 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
43. Y39G10AR.7 ekl-7 7072 7.733 0.951 0.970 0.958 0.970 0.991 0.979 0.954 0.960
44. T04A8.14 emb-5 11746 7.732 0.959 0.983 0.962 0.983 0.985 0.966 0.958 0.936 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
45. C48B4.11 C48B4.11 4384 7.732 0.963 0.979 0.944 0.979 0.980 0.974 0.965 0.948
46. B0035.3 B0035.3 4118 7.731 0.962 0.969 0.964 0.969 0.974 0.987 0.962 0.944
47. C33H5.12 rsp-6 23342 7.731 0.973 0.962 0.973 0.962 0.983 0.972 0.966 0.940 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
48. F32H2.4 thoc-3 3861 7.73 0.914 0.977 0.948 0.977 0.987 0.982 0.969 0.976 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
49. Y65B4BL.2 deps-1 18277 7.73 0.936 0.978 0.956 0.978 0.993 0.975 0.970 0.944
50. C09G4.3 cks-1 17852 7.729 0.961 0.976 0.946 0.976 0.991 0.972 0.974 0.933 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
51. Y43F4B.4 npp-18 4780 7.728 0.953 0.978 0.949 0.978 0.963 0.972 0.974 0.961 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
52. C25D7.8 otub-1 7941 7.727 0.980 0.963 0.965 0.963 0.986 0.958 0.966 0.946 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
53. Y116A8C.42 snr-1 17062 7.726 0.969 0.976 0.989 0.976 0.948 0.966 0.938 0.964 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
54. T28D9.2 rsp-5 6460 7.726 0.975 0.963 0.968 0.963 0.939 0.966 0.975 0.977 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
55. C36B1.3 rpb-3 4442 7.726 0.978 0.972 0.930 0.972 0.985 0.984 0.966 0.939 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
56. C08B6.9 aos-1 3892 7.725 0.974 0.967 0.973 0.967 0.979 0.984 0.929 0.952 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
57. T16G1.11 eif-3.K 14014 7.724 0.973 0.953 0.975 0.953 0.985 0.972 0.984 0.929 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
58. K08E7.1 eak-7 18960 7.724 0.975 0.988 0.958 0.988 0.977 0.938 0.937 0.963 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
59. R13F6.10 cra-1 11610 7.721 0.940 0.962 0.970 0.962 0.992 0.974 0.950 0.971 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
60. F32H2.1 snpc-4 7581 7.721 0.956 0.969 0.961 0.969 0.974 0.966 0.959 0.967 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
61. D1081.8 cdc-5L 8553 7.72 0.943 0.975 0.956 0.975 0.980 0.987 0.956 0.948 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
62. Y73B6BL.33 hrpf-2 4443 7.718 0.966 0.975 0.982 0.975 0.978 0.947 0.922 0.973 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
63. C18G1.5 hil-4 21692 7.716 0.950 0.978 0.922 0.978 0.992 0.959 0.980 0.957 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
64. F33H1.4 F33H1.4 2447 7.716 0.965 0.968 0.940 0.968 0.964 0.976 0.981 0.954
65. Y71D11A.2 smr-1 4976 7.715 0.962 0.968 0.939 0.968 0.982 0.976 0.961 0.959 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
66. F36A2.1 cids-2 4551 7.715 0.965 0.974 0.941 0.974 0.975 0.964 0.962 0.960 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
67. K12C11.2 smo-1 12784 7.714 0.968 0.958 0.920 0.958 0.987 0.969 0.983 0.971 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
68. F33D4.5 mrpl-1 5337 7.712 0.937 0.974 0.960 0.974 0.967 0.967 0.973 0.960 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
69. T12E12.2 cec-6 4758 7.712 0.912 0.974 0.974 0.974 0.974 0.989 0.958 0.957 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
70. F52C9.7 mog-3 9880 7.711 0.967 0.973 0.953 0.973 0.966 0.953 0.985 0.941 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
71. C48E7.3 lpd-2 10330 7.71 0.972 0.976 0.961 0.976 0.956 0.965 0.942 0.962 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
72. T05H10.2 apn-1 5628 7.709 0.959 0.986 0.939 0.986 0.964 0.973 0.973 0.929 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
73. T21D12.3 pqbp-1.1 5755 7.709 0.959 0.975 0.940 0.975 0.973 0.982 0.982 0.923 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
74. T27F2.1 skp-1 3532 7.709 0.962 0.971 0.963 0.971 0.971 0.968 0.930 0.973 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
75. K08E3.8 mdt-29 4678 7.709 0.950 0.970 0.966 0.970 0.972 0.948 0.977 0.956 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
76. K03B4.2 K03B4.2 21796 7.708 0.959 0.972 0.956 0.972 0.958 0.979 0.959 0.953
77. Y37E3.15 npp-13 7250 7.708 0.966 0.979 0.962 0.979 0.958 0.952 0.964 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
78. T12D8.8 hip-1 18283 7.708 0.971 0.971 0.958 0.971 0.978 0.949 0.974 0.936 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
79. T12D8.2 drr-2 16208 7.707 0.964 0.958 0.984 0.958 0.964 0.966 0.971 0.942 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
80. T10C6.4 srx-44 8454 7.707 0.969 0.974 0.934 0.974 0.978 0.959 0.973 0.946 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
81. ZK381.1 him-3 4913 7.706 0.965 0.953 0.976 0.953 0.960 0.963 0.984 0.952 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
82. F13G3.4 dylt-1 21345 7.706 0.963 0.961 0.979 0.961 0.985 0.946 0.953 0.958 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
83. T08B2.9 fars-1 12650 7.706 0.964 0.963 0.981 0.963 0.977 0.965 0.980 0.913 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
84. D1054.14 prp-38 6504 7.706 0.954 0.978 0.950 0.978 0.974 0.985 0.936 0.951 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
85. ZK652.1 snr-5 5993 7.705 0.931 0.968 0.969 0.968 0.991 0.990 0.933 0.955 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
86. Y46G5A.4 snrp-200 13827 7.704 0.910 0.968 0.978 0.968 0.984 0.965 0.981 0.950 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
87. F59A2.1 npp-9 34375 7.704 0.977 0.977 0.953 0.977 0.955 0.968 0.924 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
88. B0464.9 B0464.9 2997 7.703 0.930 0.979 0.940 0.979 0.976 0.988 0.970 0.941 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
89. F58D5.1 hrp-2 17211 7.701 0.966 0.963 0.971 0.963 0.983 0.962 0.969 0.924 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
90. T02G5.9 kars-1 9763 7.701 0.944 0.951 0.965 0.951 0.985 0.982 0.962 0.961 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
91. Y37D8A.9 mrg-1 14369 7.7 0.964 0.981 0.957 0.981 0.947 0.969 0.931 0.970 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
92. C50C3.6 prp-8 19582 7.697 0.954 0.964 0.948 0.964 0.984 0.972 0.954 0.957 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
93. W01G7.3 rpb-11 7826 7.697 0.952 0.959 0.950 0.959 0.982 0.988 0.984 0.923 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
94. Y47G6A.8 crn-1 3494 7.695 0.926 0.972 0.934 0.972 0.982 0.990 0.959 0.960 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
95. F58E10.3 ddx-17 15107 7.695 0.982 0.975 0.965 0.975 0.968 0.955 0.920 0.955 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
96. C06A1.5 rpb-6 7515 7.694 0.976 0.951 0.964 0.951 0.957 0.973 0.968 0.954 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
97. Y56A3A.17 npp-16 5391 7.694 0.977 0.957 0.954 0.957 0.983 0.966 0.954 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
98. R53.2 dtmk-1 6821 7.693 0.941 0.975 0.963 0.975 0.972 0.959 0.940 0.968 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
99. F46A9.4 skr-2 16831 7.692 0.978 0.942 0.977 0.942 0.985 0.958 0.978 0.932 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
100. Y39G10AR.9 Y39G10AR.9 3972 7.692 0.955 0.964 0.954 0.964 0.978 0.970 0.961 0.946

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA