C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y38A8.3

Gene ID Gene Name Reads Transcripts Annotation
Y38A8.3 ulp-2 7403 Y38A8.3 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]

Genes with expression patterns similar to Y38A8.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y38A8.3 ulp-2 7403 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
2. Y46G5A.4 snrp-200 13827 7.804 0.973 0.971 0.978 0.971 0.987 0.976 0.976 0.972 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
3. C27B7.1 spr-2 14958 7.792 0.951 0.979 0.973 0.979 0.992 0.983 0.969 0.966 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
4. Y54E5A.4 npp-4 6288 7.791 0.972 0.971 0.980 0.971 0.989 0.980 0.967 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
5. R12C12.2 ran-5 14517 7.787 0.977 0.966 0.987 0.966 0.981 0.977 0.961 0.972 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
6. C05C8.6 hpo-9 8263 7.782 0.980 0.979 0.956 0.979 0.982 0.984 0.957 0.965
7. T23H2.1 npp-12 12425 7.781 0.979 0.960 0.975 0.960 0.989 0.986 0.964 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
8. F56D2.6 ddx-15 12282 7.781 0.965 0.982 0.979 0.982 0.988 0.975 0.973 0.937 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
9. Y56A3A.17 npp-16 5391 7.777 0.963 0.975 0.968 0.975 0.981 0.983 0.964 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
10. Y65B4BL.2 deps-1 18277 7.773 0.975 0.975 0.970 0.975 0.988 0.977 0.948 0.965
11. Y17G7A.1 hmg-12 29989 7.768 0.986 0.977 0.976 0.977 0.980 0.973 0.946 0.953 HMG [Source:RefSeq peptide;Acc:NP_496544]
12. C52E4.6 cyl-1 6405 7.766 0.969 0.979 0.942 0.979 0.981 0.972 0.966 0.978 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
13. C26E6.4 rpb-2 7053 7.764 0.963 0.978 0.968 0.978 0.984 0.987 0.974 0.932 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
14. F23F1.1 nfyc-1 9983 7.761 0.983 0.973 0.984 0.973 0.966 0.977 0.940 0.965 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
15. C34E10.5 prmt-5 12277 7.757 0.971 0.964 0.979 0.964 0.991 0.988 0.968 0.932 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
16. Y34D9A.1 mrpl-38 5291 7.752 0.953 0.963 0.972 0.963 0.981 0.972 0.974 0.974 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
17. C02B10.5 C02B10.5 9171 7.745 0.965 0.960 0.969 0.960 0.987 0.989 0.948 0.967
18. T06A10.4 lsy-13 7631 7.742 0.950 0.982 0.977 0.982 0.991 0.988 0.906 0.966
19. F46B6.3 smg-4 4959 7.741 0.977 0.982 0.973 0.982 0.966 0.957 0.951 0.953 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
20. F36A2.1 cids-2 4551 7.74 0.957 0.987 0.965 0.987 0.985 0.955 0.952 0.952 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
21. Y39G10AR.7 ekl-7 7072 7.739 0.976 0.968 0.975 0.968 0.992 0.991 0.898 0.971
22. T04A8.14 emb-5 11746 7.738 0.973 0.976 0.980 0.976 0.983 0.953 0.952 0.945 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
23. Y71G12B.9 lin-65 7476 7.737 0.982 0.985 0.976 0.985 0.963 0.989 0.935 0.922 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
24. F29C4.6 tut-1 5637 7.733 0.930 0.968 0.973 0.968 0.982 0.984 0.971 0.957 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
25. C25D7.8 otub-1 7941 7.732 0.970 0.970 0.976 0.970 0.984 0.936 0.968 0.958 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
26. K01G5.4 ran-1 32379 7.732 0.975 0.973 0.964 0.973 0.985 0.975 0.936 0.951 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
27. T16G1.11 eif-3.K 14014 7.731 0.954 0.978 0.964 0.978 0.991 0.956 0.963 0.947 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
28. W02B12.3 rsp-1 9235 7.727 0.978 0.951 0.981 0.951 0.974 0.984 0.942 0.966 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
29. F52C9.7 mog-3 9880 7.727 0.964 0.971 0.973 0.971 0.975 0.979 0.977 0.917 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
30. F56C9.6 F56C9.6 4303 7.726 0.949 0.974 0.967 0.974 0.959 0.980 0.959 0.964
31. ZK686.4 snu-23 9040 7.724 0.969 0.973 0.954 0.973 0.987 0.964 0.944 0.960 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
32. F41H10.4 F41H10.4 3295 7.722 0.975 0.959 0.975 0.959 0.991 0.974 0.931 0.958
33. B0035.3 B0035.3 4118 7.717 0.968 0.952 0.975 0.952 0.991 0.974 0.955 0.950
34. F37E3.1 ncbp-1 5649 7.717 0.977 0.974 0.960 0.974 0.973 0.957 0.933 0.969 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
35. F32H2.4 thoc-3 3861 7.716 0.957 0.966 0.972 0.966 0.985 0.976 0.943 0.951 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
36. F28B3.7 him-1 18274 7.714 0.976 0.972 0.985 0.972 0.969 0.964 0.924 0.952 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
37. F22D6.3 nars-1 18624 7.713 0.953 0.977 0.969 0.977 0.992 0.977 0.909 0.959 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
38. ZK328.2 eftu-2 7040 7.712 0.966 0.973 0.968 0.973 0.970 0.963 0.973 0.926 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
39. R13F6.10 cra-1 11610 7.712 0.959 0.965 0.966 0.965 0.993 0.975 0.940 0.949 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
40. F28H1.3 aars-2 13537 7.712 0.961 0.960 0.970 0.960 0.987 0.960 0.946 0.968 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
41. Y37D8A.11 cec-7 8801 7.711 0.972 0.981 0.983 0.981 0.969 0.964 0.913 0.948 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
42. T19B4.2 npp-7 13073 7.71 0.969 0.965 0.971 0.965 0.992 0.988 0.932 0.928 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
43. F32E10.6 cec-5 10643 7.71 0.968 0.948 0.969 0.948 0.986 0.987 0.947 0.957 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
44. C13G5.2 C13G5.2 3532 7.709 0.964 0.964 0.970 0.964 0.964 0.979 0.937 0.967
45. R05D3.11 met-2 3364 7.709 0.977 0.976 0.961 0.976 0.931 0.955 0.982 0.951 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
46. Y37E3.15 npp-13 7250 7.708 0.969 0.952 0.975 0.952 0.974 0.960 0.976 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
47. F25B5.2 nop-1 4127 7.708 0.972 0.954 0.960 0.954 0.988 0.976 0.945 0.959 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
48. E01A2.4 let-504 9788 7.706 0.972 0.973 0.952 0.973 0.987 0.943 0.973 0.933
49. T28D9.2 rsp-5 6460 7.705 0.966 0.963 0.966 0.963 0.952 0.986 0.958 0.951 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
50. C36B1.8 gls-1 8617 7.704 0.975 0.978 0.968 0.978 0.969 0.931 0.937 0.968 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
51. Y53C12B.3 nos-3 20231 7.703 0.971 0.984 0.985 0.984 0.964 0.958 0.932 0.925 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
52. B0464.9 B0464.9 2997 7.702 0.947 0.964 0.947 0.964 0.974 0.979 0.954 0.973 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
53. F33D4.5 mrpl-1 5337 7.702 0.944 0.958 0.974 0.958 0.966 0.975 0.988 0.939 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
54. C04H5.6 mog-4 4517 7.701 0.934 0.980 0.957 0.980 0.967 0.981 0.954 0.948 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
55. H19N07.1 erfa-3 19869 7.701 0.952 0.977 0.977 0.977 0.987 0.943 0.928 0.960 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
56. ZK742.1 xpo-1 20741 7.7 0.958 0.963 0.982 0.963 0.985 0.965 0.950 0.934 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
57. K02F2.4 ulp-5 3433 7.699 0.944 0.963 0.968 0.963 0.972 0.968 0.978 0.943 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
58. F58D5.1 hrp-2 17211 7.699 0.965 0.952 0.965 0.952 0.983 0.964 0.969 0.949 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
59. T12E12.2 cec-6 4758 7.698 0.943 0.958 0.989 0.958 0.978 0.985 0.935 0.952 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
60. T10F2.4 prp-19 11298 7.698 0.964 0.970 0.975 0.970 0.989 0.946 0.961 0.923 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
61. F43G9.9 cpn-1 14505 7.697 0.944 0.960 0.987 0.960 0.963 0.967 0.963 0.953 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
62. F58E10.3 ddx-17 15107 7.695 0.970 0.968 0.979 0.968 0.974 0.963 0.913 0.960 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
63. F56F3.1 ifet-1 25772 7.693 0.948 0.978 0.966 0.978 0.970 0.987 0.933 0.933 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
64. W02F12.6 sna-1 7338 7.692 0.971 0.973 0.952 0.973 0.989 0.956 0.943 0.935 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
65. C48B4.11 C48B4.11 4384 7.69 0.973 0.976 0.962 0.976 0.986 0.965 0.936 0.916
66. T26A5.5 jhdm-1 12698 7.69 0.970 0.971 0.978 0.971 0.987 0.973 0.958 0.882 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
67. K02F2.3 teg-4 3873 7.69 0.958 0.965 0.967 0.965 0.987 0.977 0.936 0.935 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
68. Y37H2A.5 fbxa-210 2230 7.69 0.950 0.953 0.976 0.953 0.981 0.977 0.935 0.965 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
69. Y37A1B.1 lst-3 10739 7.689 0.958 0.969 0.970 0.969 0.979 0.943 0.946 0.955 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
70. K11D12.2 pqn-51 15951 7.688 0.972 0.976 0.972 0.976 0.989 0.955 0.926 0.922 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
71. D2030.6 prg-1 26751 7.688 0.964 0.955 0.976 0.955 0.979 0.985 0.925 0.949 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
72. F56D1.7 daz-1 23684 7.686 0.977 0.969 0.978 0.969 0.972 0.951 0.940 0.930 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
73. Y116A8C.42 snr-1 17062 7.683 0.955 0.969 0.969 0.969 0.965 0.971 0.920 0.965 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
74. F32H2.1 snpc-4 7581 7.683 0.973 0.973 0.953 0.973 0.983 0.974 0.945 0.909 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
75. T22C1.3 T22C1.3 2305 7.683 0.965 0.973 0.977 0.973 0.955 0.966 0.936 0.938
76. F10G8.3 rae-1 7542 7.683 0.966 0.971 0.980 0.971 0.984 0.968 0.915 0.928 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
77. W01G7.3 rpb-11 7826 7.681 0.945 0.957 0.971 0.957 0.985 0.978 0.949 0.939 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
78. F58G11.5 tag-65 3259 7.681 0.944 0.976 0.920 0.976 0.977 0.943 0.970 0.975 SR-related CTD associated factor 6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED97]
79. Y54E2A.3 tac-1 6308 7.68 0.957 0.959 0.950 0.959 0.989 0.956 0.940 0.970 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
80. T04A8.10 sel-13 3109 7.679 0.961 0.961 0.960 0.961 0.985 0.963 0.973 0.915 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
81. C28H8.9 dpff-1 8684 7.678 0.975 0.974 0.951 0.974 0.985 0.949 0.921 0.949 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
82. C06A5.9 rnf-1 2469 7.678 0.956 0.964 0.949 0.964 0.951 0.965 0.966 0.963 RiNg Finger protein [Source:RefSeq peptide;Acc:NP_491738]
83. T05H4.14 gad-1 7979 7.678 0.954 0.969 0.954 0.969 0.988 0.983 0.935 0.926 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
84. W02D9.1 pri-2 6048 7.677 0.961 0.977 0.957 0.977 0.983 0.937 0.954 0.931 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
85. Y41D4B.19 npp-8 12992 7.676 0.978 0.972 0.984 0.972 0.948 0.985 0.935 0.902 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
86. F59A2.1 npp-9 34375 7.676 0.977 0.963 0.961 0.963 0.961 0.986 0.910 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
87. C33H5.12 rsp-6 23342 7.675 0.951 0.965 0.969 0.965 0.978 0.954 0.941 0.952 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
88. C05D11.3 txdc-9 4903 7.675 0.952 0.960 0.957 0.960 0.983 0.944 0.954 0.965 Thioredoxin domain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q11183]
89. F28C6.6 suf-1 3642 7.673 0.954 0.950 0.966 0.950 0.985 0.975 0.959 0.934 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
90. D1081.8 cdc-5L 8553 7.671 0.967 0.968 0.965 0.968 0.986 0.974 0.891 0.952 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
91. F42A6.7 hrp-1 28201 7.671 0.964 0.957 0.976 0.957 0.990 0.948 0.961 0.918 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
92. Y61A9LA.8 sut-2 11388 7.671 0.972 0.973 0.969 0.973 0.979 0.904 0.947 0.954 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
93. T17E9.2 nmt-1 8017 7.67 0.923 0.973 0.967 0.973 0.978 0.974 0.954 0.928 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
94. T19C3.8 fem-2 9225 7.669 0.957 0.970 0.973 0.970 0.962 0.956 0.913 0.968 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
95. Y62E10A.11 mdt-9 5971 7.669 0.967 0.984 0.982 0.984 0.955 0.955 0.952 0.890 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
96. C08B11.5 sap-49 10553 7.669 0.955 0.960 0.957 0.960 0.989 0.983 0.958 0.907 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
97. ZK381.1 him-3 4913 7.668 0.950 0.962 0.967 0.962 0.980 0.989 0.930 0.928 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
98. T08B2.9 fars-1 12650 7.667 0.952 0.972 0.965 0.972 0.966 0.946 0.939 0.955 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
99. ZK507.6 cya-1 6807 7.666 0.944 0.973 0.946 0.973 0.965 0.974 0.955 0.936 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
100. F53F10.5 npp-11 3378 7.666 0.972 0.967 0.964 0.967 0.970 0.987 0.914 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]

There are 3362 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA