C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F42A6.7

Gene ID Gene Name Reads Transcripts Annotation
F42A6.7 hrp-1 28201 F42A6.7a.1, F42A6.7a.2, F42A6.7b.1, F42A6.7b.2, F42A6.7b.3, F42A6.7b.4, F42A6.7c.1, F42A6.7c.2, F42A6.7c.3, F42A6.7c.4, F42A6.7d.1, F42A6.7d.2 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]

Genes with expression patterns similar to F42A6.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F42A6.7 hrp-1 28201 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
2. K01G5.4 ran-1 32379 7.847 0.989 0.983 0.969 0.983 0.982 0.985 0.978 0.978 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
3. Y111B2A.18 rsp-3 43731 7.845 0.989 0.978 0.976 0.978 0.985 0.983 0.967 0.989 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
4. C33H5.12 rsp-6 23342 7.836 0.985 0.970 0.991 0.970 0.989 0.974 0.976 0.981 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
5. T10F2.4 prp-19 11298 7.811 0.984 0.975 0.980 0.975 0.990 0.963 0.976 0.968 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
6. F28H1.3 aars-2 13537 7.808 0.984 0.974 0.986 0.974 0.986 0.963 0.979 0.962 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
7. F58D5.1 hrp-2 17211 7.808 0.980 0.962 0.976 0.962 0.988 0.984 0.983 0.973 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
8. C08B11.5 sap-49 10553 7.805 0.986 0.977 0.986 0.977 0.989 0.959 0.982 0.949 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
9. Y116A8C.35 uaf-2 13808 7.803 0.980 0.980 0.976 0.980 0.977 0.981 0.938 0.991 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
10. T16G1.11 eif-3.K 14014 7.802 0.984 0.961 0.977 0.961 0.980 0.976 0.986 0.977 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
11. ZK742.1 xpo-1 20741 7.799 0.964 0.977 0.986 0.977 0.983 0.955 0.975 0.982 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
12. C18D11.4 rsp-8 18308 7.795 0.977 0.978 0.986 0.978 0.979 0.958 0.969 0.970 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
13. K11D12.2 pqn-51 15951 7.782 0.972 0.971 0.995 0.971 0.984 0.971 0.956 0.962 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
14. C26D10.2 hel-1 28697 7.781 0.964 0.977 0.973 0.977 0.972 0.968 0.975 0.975 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
15. C18A3.5 tiar-1 25400 7.78 0.986 0.989 0.983 0.989 0.972 0.963 0.954 0.944 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
16. Y54E5A.4 npp-4 6288 7.778 0.972 0.978 0.987 0.978 0.977 0.954 0.966 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
17. F22D6.3 nars-1 18624 7.777 0.981 0.968 0.967 0.968 0.992 0.975 0.950 0.976 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
18. C53D5.6 imb-3 28921 7.776 0.969 0.974 0.983 0.974 0.966 0.976 0.975 0.959 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
19. Y102A5A.1 cand-1 11808 7.771 0.950 0.978 0.981 0.978 0.971 0.965 0.969 0.979 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
20. T12D8.8 hip-1 18283 7.771 0.974 0.961 0.952 0.961 0.971 0.985 0.978 0.989 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
21. F32A5.7 lsm-4 3785 7.77 0.984 0.973 0.980 0.973 0.986 0.943 0.976 0.955 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
22. F32H2.1 snpc-4 7581 7.769 0.968 0.977 0.970 0.977 0.972 0.977 0.977 0.951 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
23. Y37E3.15 npp-13 7250 7.766 0.976 0.980 0.976 0.980 0.961 0.962 0.969 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
24. F56D2.6 ddx-15 12282 7.764 0.937 0.966 0.985 0.966 0.976 0.983 0.975 0.976 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
25. T19B4.2 npp-7 13073 7.763 0.971 0.972 0.986 0.972 0.984 0.937 0.969 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
26. W02B12.3 rsp-1 9235 7.763 0.991 0.967 0.981 0.967 0.970 0.968 0.955 0.964 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
27. R13F6.10 cra-1 11610 7.762 0.953 0.975 0.968 0.975 0.992 0.986 0.948 0.965 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
28. F08F8.3 kap-1 31437 7.76 0.976 0.984 0.978 0.984 0.967 0.941 0.972 0.958 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
29. T08B2.9 fars-1 12650 7.757 0.966 0.956 0.981 0.956 0.976 0.970 0.984 0.968 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
30. T17E9.2 nmt-1 8017 7.757 0.967 0.966 0.975 0.966 0.978 0.958 0.967 0.980 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
31. F23F1.1 nfyc-1 9983 7.757 0.976 0.968 0.979 0.968 0.963 0.973 0.975 0.955 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
32. F32E10.6 cec-5 10643 7.756 0.979 0.966 0.975 0.966 0.978 0.966 0.960 0.966 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
33. K08F11.3 cif-1 10218 7.755 0.981 0.944 0.951 0.944 0.986 0.985 0.981 0.983 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
34. Y46G5A.4 snrp-200 13827 7.752 0.921 0.969 0.984 0.969 0.974 0.983 0.983 0.969 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
35. K12C11.2 smo-1 12784 7.75 0.981 0.968 0.937 0.968 0.977 0.985 0.977 0.957 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
36. C26E6.4 rpb-2 7053 7.749 0.949 0.973 0.978 0.973 0.977 0.973 0.975 0.951 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
37. T01E8.6 mrps-14 9328 7.749 0.955 0.968 0.970 0.968 0.989 0.946 0.975 0.978 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
38. C34E10.5 prmt-5 12277 7.747 0.952 0.963 0.982 0.963 0.979 0.973 0.972 0.963 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
39. C47D12.6 tars-1 23488 7.745 0.972 0.974 0.970 0.974 0.978 0.982 0.915 0.980 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
40. C15H11.4 dhs-22 21674 7.745 0.969 0.965 0.988 0.965 0.980 0.947 0.974 0.957 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
41. T23H2.1 npp-12 12425 7.743 0.966 0.975 0.980 0.975 0.976 0.962 0.982 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
42. Y40B1B.5 eif-3.J 15061 7.741 0.981 0.957 0.974 0.957 0.976 0.967 0.953 0.976 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
43. Y34D9A.1 mrpl-38 5291 7.741 0.972 0.963 0.961 0.963 0.982 0.983 0.969 0.948 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
44. F13G3.4 dylt-1 21345 7.741 0.958 0.964 0.990 0.964 0.985 0.952 0.959 0.969 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
45. C25D7.8 otub-1 7941 7.739 0.979 0.964 0.977 0.964 0.985 0.960 0.966 0.944 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
46. W02F12.6 sna-1 7338 7.738 0.966 0.963 0.955 0.963 0.988 0.985 0.958 0.960 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
47. C52E4.6 cyl-1 6405 7.735 0.982 0.969 0.951 0.969 0.983 0.965 0.965 0.951 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
48. Y113G7B.23 swsn-1 13766 7.734 0.985 0.970 0.983 0.970 0.955 0.958 0.931 0.982 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
49. K02F3.11 rnp-5 6205 7.734 0.972 0.971 0.970 0.971 0.981 0.950 0.949 0.970 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
50. ZK863.6 dpy-30 16177 7.733 0.985 0.983 0.979 0.983 0.970 0.933 0.939 0.961 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
51. C43E11.1 acin-1 7781 7.733 0.947 0.973 0.982 0.973 0.982 0.974 0.936 0.966 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
52. Y61A9LA.8 sut-2 11388 7.731 0.972 0.976 0.964 0.976 0.970 0.961 0.940 0.972 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
53. ZK1058.4 ccdc-47 8879 7.729 0.985 0.950 0.982 0.950 0.980 0.953 0.979 0.950 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
54. C48B4.11 C48B4.11 4384 7.729 0.961 0.979 0.964 0.979 0.971 0.954 0.967 0.954
55. Y39G10AR.9 Y39G10AR.9 3972 7.727 0.957 0.969 0.946 0.969 0.976 0.968 0.955 0.987
56. C02B10.5 C02B10.5 9171 7.727 0.982 0.936 0.983 0.936 0.972 0.967 0.986 0.965
57. Y53C12B.3 nos-3 20231 7.725 0.965 0.975 0.979 0.975 0.954 0.955 0.956 0.966 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
58. T21D12.3 pqbp-1.1 5755 7.723 0.952 0.959 0.968 0.959 0.985 0.966 0.976 0.958 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
59. Y54E10A.9 vbh-1 28746 7.72 0.966 0.973 0.974 0.973 0.951 0.979 0.942 0.962 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
60. K02F2.3 teg-4 3873 7.719 0.912 0.973 0.968 0.973 0.990 0.974 0.963 0.966 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
61. F58E10.3 ddx-17 15107 7.719 0.980 0.965 0.984 0.965 0.964 0.949 0.945 0.967 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
62. Y17G7A.1 hmg-12 29989 7.718 0.984 0.976 0.976 0.976 0.961 0.955 0.974 0.916 HMG [Source:RefSeq peptide;Acc:NP_496544]
63. Y97E10AR.5 rpb-9 3598 7.718 0.965 0.955 0.976 0.955 0.982 0.978 0.932 0.975 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
64. F26F4.10 rars-1 9971 7.717 0.976 0.936 0.968 0.936 0.981 0.978 0.971 0.971 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
65. R12C12.2 ran-5 14517 7.716 0.984 0.972 0.976 0.972 0.975 0.941 0.971 0.925 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
66. B0261.4 mrpl-47 8210 7.716 0.917 0.973 0.956 0.973 0.986 0.982 0.978 0.951 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
67. W01G7.3 rpb-11 7826 7.715 0.961 0.953 0.969 0.953 0.992 0.962 0.979 0.946 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
68. B0025.2 csn-2 5205 7.715 0.949 0.969 0.949 0.969 0.972 0.973 0.975 0.959 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
69. C18G1.5 hil-4 21692 7.714 0.964 0.967 0.957 0.967 0.977 0.967 0.957 0.958 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
70. Y116A8C.42 snr-1 17062 7.714 0.967 0.973 0.983 0.973 0.954 0.962 0.955 0.947 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
71. T11G6.1 hars-1 7908 7.714 0.967 0.946 0.973 0.946 0.986 0.970 0.978 0.948 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
72. B0464.1 dars-1 12331 7.713 0.945 0.953 0.951 0.953 0.990 0.986 0.981 0.954 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
73. K08F4.2 gtbp-1 25222 7.712 0.974 0.963 0.983 0.963 0.964 0.962 0.924 0.979 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
74. H19N07.1 erfa-3 19869 7.712 0.973 0.966 0.968 0.966 0.981 0.982 0.938 0.938 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
75. B0035.3 B0035.3 4118 7.711 0.966 0.972 0.979 0.972 0.982 0.959 0.972 0.909
76. F28B3.8 imb-1 7515 7.71 0.949 0.960 0.958 0.960 0.970 0.961 0.978 0.974 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
77. T04A8.14 emb-5 11746 7.708 0.957 0.976 0.977 0.976 0.978 0.964 0.946 0.934 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
78. R05D11.3 ran-4 15494 7.707 0.983 0.969 0.985 0.969 0.970 0.944 0.947 0.940 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
79. C27B7.1 spr-2 14958 7.706 0.966 0.979 0.975 0.979 0.988 0.922 0.962 0.935 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
80. C06E7.1 sams-3 26921 7.706 0.960 0.968 0.969 0.968 0.971 0.979 0.953 0.938 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
81. Y37D8A.9 mrg-1 14369 7.704 0.971 0.977 0.977 0.977 0.949 0.956 0.934 0.963 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
82. C09G4.3 cks-1 17852 7.703 0.968 0.972 0.971 0.972 0.982 0.943 0.943 0.952 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
83. D2013.7 eif-3.F 21004 7.703 0.957 0.945 0.964 0.945 0.988 0.962 0.954 0.988 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
84. R07E5.14 rnp-4 11659 7.702 0.984 0.974 0.983 0.974 0.954 0.939 0.928 0.966 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
85. ZK616.6 perm-3 16186 7.701 0.972 0.948 0.971 0.948 0.980 0.968 0.962 0.952 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
86. F59A2.1 npp-9 34375 7.701 0.980 0.992 0.969 0.992 0.944 0.929 0.938 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
87. T21C9.12 scpl-4 14723 7.701 0.938 0.955 0.945 0.955 0.987 0.982 0.968 0.971 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
88. R09B3.5 mag-1 7496 7.7 0.962 0.960 0.971 0.960 0.965 0.967 0.969 0.946 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
89. T06A10.4 lsy-13 7631 7.699 0.962 0.969 0.974 0.969 0.993 0.935 0.960 0.937
90. Y65B4BR.5 icd-2 58321 7.699 0.942 0.939 0.971 0.939 0.966 0.987 0.974 0.981 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
91. K08E7.1 eak-7 18960 7.699 0.974 0.972 0.980 0.972 0.978 0.917 0.949 0.957 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
92. F36A4.7 ama-1 13620 7.699 0.919 0.960 0.984 0.960 0.975 0.987 0.950 0.964 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
93. Y56A3A.17 npp-16 5391 7.698 0.987 0.965 0.973 0.965 0.968 0.969 0.960 0.911 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
94. F56D1.7 daz-1 23684 7.698 0.965 0.969 0.982 0.969 0.968 0.947 0.944 0.954 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
95. F59E12.11 sam-4 8179 7.698 0.976 0.961 0.985 0.961 0.954 0.955 0.956 0.950
96. F37E3.1 ncbp-1 5649 7.697 0.966 0.961 0.973 0.961 0.958 0.980 0.946 0.952 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
97. T12D8.2 drr-2 16208 7.697 0.968 0.954 0.978 0.954 0.952 0.975 0.948 0.968 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
98. H17B01.4 emc-1 9037 7.696 0.934 0.980 0.976 0.980 0.983 0.926 0.953 0.964 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
99. ZK328.2 eftu-2 7040 7.695 0.934 0.979 0.953 0.979 0.971 0.965 0.960 0.954 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
100. F10G8.3 rae-1 7542 7.694 0.970 0.969 0.982 0.969 0.983 0.956 0.914 0.951 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]

There are 3276 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA