C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for EEED8.7

Gene ID Gene Name Reads Transcripts Annotation
EEED8.7 rsp-4 13043 EEED8.7a, EEED8.7b Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]

Genes with expression patterns similar to EEED8.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. EEED8.7 rsp-4 13043 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
2. C09G4.3 cks-1 17852 7.803 0.989 0.974 0.990 0.974 0.959 0.959 0.987 0.971 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
3. T20F5.7 T20F5.7 5210 7.749 0.979 0.970 0.974 0.970 0.970 0.989 0.945 0.952
4. CD4.6 pas-6 18332 7.746 0.971 0.980 0.954 0.980 0.976 0.980 0.933 0.972 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
5. W03F9.5 ttb-1 8682 7.745 0.958 0.967 0.978 0.967 0.983 0.991 0.957 0.944 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
6. R06C7.1 wago-1 4303 7.743 0.975 0.980 0.967 0.980 0.950 0.972 0.967 0.952 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
7. T12D8.3 acbp-5 6816 7.742 0.982 0.980 0.978 0.980 0.949 0.966 0.966 0.941 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
8. ZK328.5 npp-10 7652 7.74 0.958 0.967 0.964 0.967 0.971 0.986 0.967 0.960 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
9. F12F6.3 rib-1 10524 7.732 0.961 0.981 0.971 0.981 0.984 0.975 0.950 0.929 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
10. C25A1.5 C25A1.5 9135 7.728 0.977 0.969 0.985 0.969 0.957 0.991 0.945 0.935
11. F18E2.3 scc-3 13464 7.726 0.957 0.962 0.974 0.962 0.968 0.981 0.970 0.952 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
12. K08D12.1 pbs-1 21677 7.723 0.966 0.974 0.968 0.974 0.976 0.965 0.930 0.970 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
13. F39H11.5 pbs-7 13631 7.72 0.946 0.973 0.971 0.973 0.977 0.968 0.946 0.966 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
14. F23B2.6 aly-2 7301 7.72 0.979 0.962 0.942 0.962 0.967 0.984 0.957 0.967 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501594]
15. T10C6.4 srx-44 8454 7.718 0.967 0.971 0.952 0.971 0.963 0.957 0.956 0.981 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
16. Y54G9A.6 bub-3 9123 7.718 0.959 0.978 0.974 0.978 0.967 0.962 0.947 0.953 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
17. R01H2.6 ubc-18 13394 7.716 0.956 0.973 0.950 0.973 0.980 0.985 0.948 0.951 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
18. C02B10.2 snpn-1 5519 7.711 0.972 0.970 0.973 0.970 0.985 0.956 0.951 0.934 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
19. Y53H1A.5 nfya-2 4166 7.708 0.970 0.980 0.969 0.980 0.979 0.967 0.941 0.922 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
20. F57C2.6 spat-1 5615 7.707 0.980 0.959 0.975 0.959 0.961 0.966 0.974 0.933 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
21. T05F1.6 hsr-9 13312 7.706 0.968 0.972 0.961 0.972 0.981 0.979 0.956 0.917
22. C26E6.5 fsn-1 6615 7.703 0.954 0.978 0.970 0.978 0.962 0.986 0.962 0.913 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
23. F26E4.1 sur-6 16191 7.701 0.981 0.969 0.979 0.969 0.974 0.952 0.927 0.950 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
24. Y71D11A.2 smr-1 4976 7.696 0.978 0.973 0.964 0.973 0.951 0.947 0.934 0.976 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
25. Y38A8.2 pbs-3 18117 7.694 0.958 0.970 0.975 0.970 0.961 0.958 0.940 0.962 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
26. F59B2.7 rab-6.1 10749 7.694 0.934 0.979 0.972 0.979 0.964 0.969 0.930 0.967 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
27. W05B10.1 his-74 21926 7.694 0.963 0.963 0.968 0.963 0.980 0.988 0.941 0.928 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
28. ZK287.5 rbx-1 13546 7.693 0.972 0.971 0.980 0.971 0.952 0.964 0.944 0.939 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
29. C18D11.4 rsp-8 18308 7.693 0.958 0.979 0.966 0.979 0.965 0.960 0.960 0.926 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
30. T07F8.3 gld-3 9324 7.692 0.973 0.950 0.978 0.950 0.981 0.987 0.957 0.916 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
31. F37A4.8 isw-1 9337 7.69 0.965 0.973 0.963 0.973 0.980 0.987 0.921 0.928 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
32. B0334.5 B0334.5 4713 7.689 0.954 0.949 0.972 0.949 0.960 0.977 0.955 0.973
33. K07C5.8 cash-1 10523 7.688 0.972 0.954 0.946 0.954 0.973 0.972 0.952 0.965 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
34. F17C11.10 F17C11.10 4355 7.688 0.969 0.957 0.956 0.957 0.976 0.984 0.938 0.951
35. C13B4.2 usp-14 9000 7.687 0.974 0.966 0.984 0.966 0.953 0.964 0.927 0.953 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
36. C36B1.4 pas-4 13140 7.685 0.917 0.978 0.970 0.978 0.971 0.981 0.939 0.951 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
37. T10H9.3 syx-18 2416 7.684 0.964 0.979 0.964 0.979 0.963 0.970 0.940 0.925 SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
38. C14B9.4 plk-1 18785 7.684 0.983 0.959 0.990 0.959 0.962 0.975 0.893 0.963 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
39. T20B12.2 tbp-1 9014 7.683 0.978 0.959 0.986 0.959 0.943 0.963 0.959 0.936 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
40. F44A2.1 tag-153 16535 7.683 0.946 0.966 0.958 0.966 0.980 0.968 0.957 0.942
41. T17E9.1 kin-18 8172 7.682 0.973 0.980 0.976 0.980 0.939 0.984 0.950 0.900 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
42. T06D8.6 cchl-1 26292 7.681 0.951 0.979 0.967 0.979 0.958 0.978 0.921 0.948 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
43. Y18D10A.20 pfn-1 33871 7.68 0.981 0.975 0.973 0.975 0.959 0.945 0.894 0.978 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
44. F57B1.2 sun-1 5721 7.678 0.953 0.956 0.970 0.956 0.960 0.972 0.975 0.936 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
45. Y48B6A.14 hmg-1.1 88723 7.677 0.958 0.958 0.971 0.958 0.946 0.976 0.963 0.947 HMG [Source:RefSeq peptide;Acc:NP_496970]
46. F16D3.2 rsd-6 8211 7.676 0.967 0.965 0.962 0.965 0.960 0.987 0.936 0.934
47. Y61A9LA.8 sut-2 11388 7.675 0.940 0.967 0.957 0.967 0.967 0.978 0.938 0.961 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
48. ZC518.3 ccr-4 15531 7.672 0.979 0.980 0.979 0.980 0.966 0.938 0.954 0.896 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
49. Y55D9A.1 efa-6 10012 7.671 0.973 0.944 0.972 0.944 0.974 0.983 0.940 0.941 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
50. Y110A7A.14 pas-3 6831 7.671 0.932 0.971 0.963 0.971 0.961 0.946 0.974 0.953 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
51. F56D1.7 daz-1 23684 7.671 0.912 0.980 0.972 0.980 0.968 0.961 0.948 0.950 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
52. F08D12.1 srpa-72 9890 7.671 0.943 0.963 0.946 0.963 0.965 0.974 0.957 0.960 Signal recognition particle subunit SRP72 [Source:UniProtKB/Swiss-Prot;Acc:P91240]
53. C18G1.5 hil-4 21692 7.67 0.981 0.968 0.971 0.968 0.947 0.947 0.961 0.927 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
54. F52B5.5 cep-1 2194 7.669 0.937 0.976 0.902 0.976 0.969 0.983 0.976 0.950 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
55. T20H4.4 adr-2 5495 7.669 0.929 0.959 0.933 0.959 0.957 0.989 0.955 0.988 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
56. C08C3.4 cyk-7 12075 7.669 0.947 0.968 0.962 0.968 0.963 0.983 0.916 0.962 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
57. F46A9.4 skr-2 16831 7.668 0.927 0.955 0.958 0.955 0.971 0.971 0.978 0.953 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
58. Y17G7B.17 Y17G7B.17 11197 7.667 0.983 0.959 0.982 0.959 0.955 0.977 0.918 0.934
59. T04A8.14 emb-5 11746 7.667 0.969 0.973 0.973 0.973 0.966 0.946 0.916 0.951 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
60. ZK1127.4 ZK1127.4 3088 7.667 0.942 0.961 0.972 0.961 0.967 0.946 0.961 0.957 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
61. Y111B2A.18 rsp-3 43731 7.667 0.975 0.978 0.959 0.978 0.951 0.925 0.945 0.956 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
62. C50A2.2 cec-2 4169 7.665 0.957 0.944 0.990 0.944 0.985 0.959 0.950 0.936 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
63. F41E6.4 smk-1 22394 7.665 0.919 0.962 0.950 0.962 0.972 0.985 0.948 0.967 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
64. Y92C3B.2 uaf-1 14981 7.664 0.969 0.964 0.946 0.964 0.972 0.972 0.915 0.962 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
65. F32E10.6 cec-5 10643 7.66 0.974 0.977 0.963 0.977 0.958 0.911 0.946 0.954 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
66. T21D12.3 pqbp-1.1 5755 7.659 0.967 0.968 0.947 0.968 0.943 0.960 0.963 0.943 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
67. C48E7.3 lpd-2 10330 7.657 0.945 0.979 0.972 0.979 0.953 0.953 0.937 0.939 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
68. K12D12.1 top-2 18694 7.655 0.961 0.943 0.979 0.943 0.947 0.988 0.939 0.955 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
69. Y105E8A.17 ekl-4 4732 7.654 0.947 0.962 0.959 0.962 0.965 0.958 0.958 0.943
70. F55B12.3 sel-10 10304 7.651 0.959 0.967 0.971 0.967 0.961 0.959 0.914 0.953 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
71. ZC395.8 ztf-8 5521 7.651 0.930 0.976 0.966 0.976 0.952 0.966 0.970 0.915 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
72. F12F6.5 srgp-1 9048 7.65 0.934 0.981 0.974 0.981 0.955 0.977 0.920 0.928 Slit-Robo GAP homolog [Source:RefSeq peptide;Acc:NP_001255567]
73. K02F2.1 dpf-3 11465 7.65 0.968 0.967 0.985 0.967 0.963 0.978 0.931 0.891 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
74. K06H7.9 idi-1 3291 7.649 0.979 0.953 0.974 0.953 0.954 0.962 0.953 0.921 Isopentenyl Diphosphate Isomerase [Source:RefSeq peptide;Acc:NP_498766]
75. C02F5.9 pbs-6 20120 7.649 0.942 0.973 0.977 0.973 0.938 0.959 0.929 0.958 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
76. F58B6.3 par-2 3914 7.648 0.965 0.960 0.974 0.960 0.959 0.974 0.956 0.900
77. T06D8.8 rpn-9 11282 7.648 0.971 0.952 0.974 0.952 0.949 0.967 0.942 0.941 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
78. F58G11.1 letm-1 13414 7.647 0.977 0.967 0.972 0.967 0.961 0.965 0.914 0.924 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
79. Y113G7B.23 swsn-1 13766 7.645 0.958 0.954 0.962 0.954 0.964 0.941 0.950 0.962 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
80. Y116A8C.35 uaf-2 13808 7.645 0.942 0.977 0.959 0.977 0.947 0.947 0.938 0.958 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
81. B0547.1 csn-5 3568 7.645 0.924 0.964 0.962 0.964 0.954 0.986 0.944 0.947 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
82. T01G9.4 npp-2 5361 7.644 0.938 0.954 0.947 0.954 0.973 0.956 0.964 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
83. C17E4.10 C17E4.10 7034 7.644 0.971 0.960 0.977 0.960 0.966 0.959 0.940 0.911
84. B0205.1 B0205.1 2403 7.642 0.975 0.945 0.952 0.945 0.952 0.985 0.937 0.951
85. T09B4.1 pigv-1 13282 7.641 0.942 0.936 0.973 0.936 0.977 0.957 0.968 0.952 GPI mannosyltransferase pigv-1 [Source:UniProtKB/Swiss-Prot;Acc:O02164]
86. F19B6.2 ufd-1 15357 7.641 0.949 0.952 0.948 0.952 0.970 0.945 0.974 0.951 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
87. Y56A3A.1 ntl-3 10450 7.641 0.954 0.968 0.965 0.968 0.955 0.971 0.916 0.944 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
88. Y73F8A.34 tag-349 7966 7.64 0.971 0.935 0.981 0.935 0.960 0.973 0.961 0.924
89. T23B12.4 natc-1 7759 7.64 0.951 0.946 0.980 0.946 0.969 0.965 0.951 0.932 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
90. C53D5.6 imb-3 28921 7.639 0.899 0.966 0.935 0.966 0.970 0.964 0.965 0.974 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
91. D2089.1 rsp-7 11057 7.638 0.962 0.948 0.970 0.948 0.945 0.978 0.934 0.953 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
92. F38A5.13 dnj-11 19678 7.636 0.902 0.972 0.964 0.972 0.981 0.990 0.903 0.952 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
93. F28D9.1 rsr-1 4282 7.635 0.932 0.963 0.973 0.963 0.955 0.963 0.929 0.957 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
94. T10F2.4 prp-19 11298 7.635 0.960 0.972 0.949 0.972 0.962 0.947 0.939 0.934 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
95. F37E3.1 ncbp-1 5649 7.634 0.964 0.973 0.980 0.973 0.940 0.952 0.941 0.911 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
96. K01C8.10 cct-4 15077 7.634 0.928 0.971 0.946 0.971 0.945 0.966 0.949 0.958 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
97. T20F5.2 pbs-4 8985 7.633 0.942 0.974 0.988 0.974 0.961 0.952 0.912 0.930 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
98. T21B10.5 set-17 5292 7.632 0.977 0.948 0.972 0.948 0.951 0.982 0.935 0.919 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
99. Y43F8C.14 ani-3 3013 7.632 0.962 0.981 0.980 0.981 0.944 0.951 0.925 0.908 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
100. C36B1.8 gls-1 8617 7.631 0.955 0.953 0.968 0.953 0.979 0.956 0.945 0.922 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]

There are 2840 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA