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Results for F56A8.6

Gene ID Gene Name Reads Transcripts Annotation
F56A8.6 cpf-2 2730 F56A8.6.1, F56A8.6.2 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]

Genes with expression patterns similar to F56A8.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56A8.6 cpf-2 2730 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
2. Y73F8A.34 tag-349 7966 7.717 0.954 0.963 0.968 0.963 0.987 0.983 0.971 0.928
3. Y47G6A.20 rnp-6 5542 7.713 0.961 0.968 0.948 0.968 0.982 0.989 0.933 0.964 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
4. F58B6.3 par-2 3914 7.707 0.988 0.969 0.957 0.969 0.958 0.963 0.971 0.932
5. T10C6.4 srx-44 8454 7.705 0.966 0.958 0.978 0.958 0.981 0.968 0.956 0.940 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
6. C09G4.3 cks-1 17852 7.699 0.966 0.958 0.947 0.958 0.989 0.971 0.959 0.951 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
7. Y113G7B.23 swsn-1 13766 7.698 0.953 0.962 0.957 0.962 0.960 0.967 0.967 0.970 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
8. C50C3.6 prp-8 19582 7.696 0.943 0.953 0.952 0.953 0.968 0.985 0.982 0.960 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
9. T10F2.4 prp-19 11298 7.69 0.979 0.957 0.952 0.957 0.985 0.947 0.961 0.952 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
10. Y105E8A.17 ekl-4 4732 7.685 0.958 0.967 0.953 0.967 0.960 0.980 0.939 0.961
11. T05F1.6 hsr-9 13312 7.682 0.964 0.975 0.958 0.975 0.960 0.976 0.932 0.942
12. D2089.1 rsp-7 11057 7.681 0.960 0.954 0.969 0.954 0.964 0.978 0.960 0.942 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
13. F18E2.3 scc-3 13464 7.674 0.962 0.953 0.965 0.953 0.961 0.967 0.981 0.932 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
14. T01G9.4 npp-2 5361 7.672 0.947 0.962 0.957 0.962 0.972 0.956 0.970 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
15. K02F2.1 dpf-3 11465 7.669 0.945 0.967 0.967 0.967 0.973 0.968 0.967 0.915 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
16. F16D3.2 rsd-6 8211 7.663 0.946 0.966 0.962 0.966 0.953 0.968 0.956 0.946
17. F39H11.5 pbs-7 13631 7.658 0.950 0.964 0.958 0.964 0.953 0.968 0.944 0.957 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
18. F32H2.4 thoc-3 3861 7.656 0.956 0.983 0.954 0.983 0.982 0.941 0.946 0.911 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
19. D1081.9 D1081.9 3792 7.655 0.936 0.948 0.963 0.948 0.966 0.992 0.950 0.952
20. Y81G3A.3 gcn-2 5831 7.653 0.961 0.951 0.941 0.951 0.967 0.977 0.948 0.957 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
21. R02D3.5 fnta-1 5258 7.651 0.966 0.961 0.958 0.961 0.972 0.975 0.967 0.891 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
22. C43E11.1 acin-1 7781 7.65 0.932 0.952 0.956 0.952 0.987 0.950 0.966 0.955 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
23. Y48G8AL.6 smg-2 12561 7.649 0.958 0.941 0.946 0.941 0.960 0.978 0.966 0.959 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
24. T04A8.14 emb-5 11746 7.648 0.960 0.966 0.955 0.966 0.968 0.970 0.970 0.893 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
25. K08D12.1 pbs-1 21677 7.647 0.965 0.964 0.960 0.964 0.938 0.959 0.935 0.962 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
26. Y54E10A.9 vbh-1 28746 7.646 0.951 0.961 0.930 0.961 0.964 0.955 0.977 0.947 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
27. C18D11.4 rsp-8 18308 7.644 0.965 0.955 0.931 0.955 0.976 0.960 0.959 0.943 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
28. Y71D11A.2 smr-1 4976 7.643 0.960 0.941 0.941 0.941 0.977 0.968 0.961 0.954 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
29. Y110A7A.8 prp-31 4436 7.641 0.958 0.963 0.939 0.963 0.993 0.967 0.913 0.945 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
30. T17E9.2 nmt-1 8017 7.641 0.947 0.964 0.929 0.964 0.970 0.959 0.957 0.951 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
31. Y102A5A.1 cand-1 11808 7.641 0.945 0.964 0.945 0.964 0.965 0.954 0.937 0.967 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
32. C08B11.5 sap-49 10553 7.641 0.958 0.970 0.930 0.970 0.980 0.960 0.961 0.912 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
33. Y67H2A.6 csn-6 3098 7.639 0.932 0.974 0.948 0.974 0.979 0.933 0.959 0.940 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
34. F44A2.1 tag-153 16535 7.635 0.965 0.957 0.950 0.957 0.950 0.967 0.947 0.942
35. F58G11.1 letm-1 13414 7.635 0.974 0.962 0.949 0.962 0.934 0.966 0.931 0.957 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
36. K10D2.3 cid-1 7175 7.634 0.932 0.953 0.965 0.953 0.970 0.966 0.940 0.955 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
37. F46A9.4 skr-2 16831 7.632 0.966 0.932 0.946 0.932 0.979 0.968 0.955 0.954 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
38. Y38A8.2 pbs-3 18117 7.632 0.971 0.957 0.950 0.957 0.962 0.972 0.938 0.925 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
39. ZK858.1 gld-4 14162 7.631 0.963 0.927 0.964 0.927 0.973 0.978 0.967 0.932 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
40. C18G1.5 hil-4 21692 7.63 0.939 0.959 0.950 0.959 0.969 0.943 0.963 0.948 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
41. T01G1.3 sec-31 10504 7.629 0.935 0.956 0.950 0.956 0.967 0.987 0.925 0.953 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
42. F56D1.7 daz-1 23684 7.629 0.947 0.954 0.963 0.954 0.975 0.969 0.935 0.932 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
43. CD4.6 pas-6 18332 7.628 0.958 0.958 0.950 0.958 0.942 0.969 0.950 0.943 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
44. F35G12.8 smc-4 6202 7.628 0.953 0.931 0.960 0.931 0.978 0.975 0.974 0.926 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
45. K07C5.8 cash-1 10523 7.627 0.975 0.970 0.960 0.970 0.960 0.975 0.954 0.863 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
46. Y111B2A.18 rsp-3 43731 7.626 0.972 0.947 0.947 0.947 0.982 0.940 0.944 0.947 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
47. C47D12.6 tars-1 23488 7.625 0.967 0.943 0.921 0.943 0.972 0.943 0.971 0.965 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
48. C36B1.8 gls-1 8617 7.623 0.955 0.946 0.949 0.946 0.982 0.958 0.958 0.929 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
49. C36B1.4 pas-4 13140 7.622 0.940 0.956 0.939 0.956 0.949 0.976 0.945 0.961 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
50. Y40B1B.5 eif-3.J 15061 7.622 0.963 0.949 0.937 0.949 0.970 0.949 0.940 0.965 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
51. Y116A8C.35 uaf-2 13808 7.622 0.961 0.934 0.953 0.934 0.976 0.958 0.939 0.967 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
52. Y71F9B.16 dnj-30 4262 7.622 0.943 0.956 0.968 0.956 0.957 0.959 0.941 0.942 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
53. T06D8.6 cchl-1 26292 7.622 0.949 0.946 0.946 0.946 0.945 0.959 0.969 0.962 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
54. T12D8.3 acbp-5 6816 7.621 0.933 0.967 0.952 0.967 0.966 0.983 0.940 0.913 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
55. ZK1127.4 ZK1127.4 3088 7.621 0.922 0.952 0.951 0.952 0.978 0.976 0.964 0.926 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
56. Y43C5A.6 rad-51 5327 7.618 0.935 0.949 0.963 0.949 0.987 0.947 0.956 0.932 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
57. F39B2.10 dnj-12 35162 7.617 0.952 0.956 0.949 0.956 0.935 0.983 0.958 0.928 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
58. W02B12.3 rsp-1 9235 7.617 0.977 0.961 0.970 0.961 0.955 0.930 0.944 0.919 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
59. ZK616.6 perm-3 16186 7.617 0.965 0.960 0.948 0.960 0.958 0.970 0.926 0.930 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
60. D1054.14 prp-38 6504 7.616 0.951 0.955 0.952 0.955 0.975 0.973 0.930 0.925 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
61. W09C5.7 W09C5.7 2359 7.615 0.929 0.967 0.924 0.967 0.976 0.951 0.939 0.962
62. C06E7.1 sams-3 26921 7.615 0.946 0.955 0.944 0.955 0.983 0.953 0.932 0.947 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
63. W03F9.5 ttb-1 8682 7.615 0.971 0.939 0.960 0.939 0.971 0.977 0.934 0.924 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
64. R07G3.5 pgam-5 11646 7.615 0.951 0.959 0.946 0.959 0.960 0.948 0.971 0.921 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
65. W05B10.1 his-74 21926 7.614 0.959 0.959 0.951 0.959 0.949 0.968 0.949 0.920 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
66. F37A4.8 isw-1 9337 7.614 0.949 0.974 0.956 0.974 0.962 0.967 0.954 0.878 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
67. Y92C3B.2 uaf-1 14981 7.613 0.971 0.977 0.945 0.977 0.937 0.961 0.911 0.934 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
68. F43E2.2 rpb-4 2812 7.613 0.943 0.962 0.952 0.962 0.991 0.956 0.892 0.955 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
69. C29E4.2 kle-2 5527 7.612 0.965 0.958 0.941 0.958 0.958 0.978 0.938 0.916 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
70. B0025.2 csn-2 5205 7.611 0.915 0.973 0.952 0.973 0.973 0.943 0.937 0.945 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
71. T12D8.8 hip-1 18283 7.611 0.949 0.946 0.914 0.946 0.973 0.956 0.962 0.965 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
72. C34E10.5 prmt-5 12277 7.61 0.959 0.952 0.956 0.952 0.951 0.954 0.957 0.929 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
73. T12D8.2 drr-2 16208 7.609 0.956 0.936 0.937 0.936 0.971 0.959 0.960 0.954 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
74. F42A6.7 hrp-1 28201 7.607 0.962 0.943 0.950 0.943 0.978 0.946 0.927 0.958 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
75. Y110A7A.14 pas-3 6831 7.605 0.952 0.959 0.919 0.959 0.947 0.963 0.942 0.964 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
76. C27B7.1 spr-2 14958 7.605 0.961 0.958 0.962 0.958 0.967 0.926 0.962 0.911 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
77. Y71G12B.1 chaf-2 3451 7.603 0.959 0.963 0.935 0.963 0.966 0.957 0.934 0.926 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
78. F28B3.8 imb-1 7515 7.603 0.935 0.977 0.949 0.977 0.963 0.956 0.901 0.945 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
79. T20B12.2 tbp-1 9014 7.603 0.956 0.977 0.946 0.977 0.970 0.974 0.889 0.914 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
80. B0205.1 B0205.1 2403 7.603 0.940 0.946 0.947 0.946 0.967 0.981 0.943 0.933
81. T20G5.11 rde-4 3966 7.602 0.967 0.940 0.958 0.940 0.973 0.967 0.933 0.924 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
82. F41E6.4 smk-1 22394 7.602 0.942 0.949 0.960 0.949 0.947 0.970 0.948 0.937 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
83. F17C11.10 F17C11.10 4355 7.601 0.954 0.962 0.930 0.962 0.975 0.961 0.944 0.913
84. B0464.9 B0464.9 2997 7.6 0.931 0.959 0.956 0.959 0.978 0.934 0.970 0.913 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
85. F22D6.3 nars-1 18624 7.6 0.946 0.960 0.925 0.960 0.980 0.937 0.960 0.932 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
86. C08C3.4 cyk-7 12075 7.599 0.966 0.951 0.965 0.951 0.956 0.963 0.924 0.923 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
87. Y55D9A.1 efa-6 10012 7.599 0.941 0.938 0.962 0.938 0.949 0.970 0.972 0.929 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
88. C17E4.5 pabp-2 12843 7.598 0.957 0.959 0.942 0.959 0.926 0.987 0.926 0.942 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
89. T19B4.2 npp-7 13073 7.598 0.985 0.976 0.946 0.976 0.962 0.928 0.884 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
90. Y61A9LA.8 sut-2 11388 7.598 0.958 0.925 0.953 0.925 0.973 0.952 0.951 0.961 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
91. F59B2.7 rab-6.1 10749 7.598 0.954 0.939 0.962 0.939 0.953 0.966 0.964 0.921 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
92. C17E4.10 C17E4.10 7034 7.596 0.947 0.933 0.954 0.933 0.971 0.964 0.959 0.935
93. R01H2.6 ubc-18 13394 7.596 0.961 0.958 0.945 0.958 0.948 0.967 0.941 0.918 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
94. ZK381.4 pgl-1 20651 7.595 0.945 0.952 0.945 0.952 0.953 0.946 0.962 0.940 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
95. T20H4.4 adr-2 5495 7.595 0.931 0.965 0.954 0.965 0.953 0.962 0.975 0.890 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
96. Y34D9A.1 mrpl-38 5291 7.594 0.948 0.961 0.932 0.961 0.972 0.951 0.953 0.916 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
97. F26F4.10 rars-1 9971 7.594 0.965 0.925 0.944 0.925 0.978 0.962 0.926 0.969 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
98. F10B5.6 emb-27 2578 7.594 0.963 0.941 0.931 0.941 0.991 0.932 0.956 0.939 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
99. Y56A3A.20 ccf-1 18463 7.594 0.959 0.953 0.955 0.953 0.977 0.938 0.936 0.923 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
100. F32E10.6 cec-5 10643 7.593 0.966 0.947 0.957 0.947 0.966 0.940 0.946 0.924 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA