C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y40B1B.5

Gene ID Gene Name Reads Transcripts Annotation
Y40B1B.5 eif-3.J 15061 Y40B1B.5.1, Y40B1B.5.2 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]

Genes with expression patterns similar to Y40B1B.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y40B1B.5 eif-3.J 15061 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
2. K08F11.3 cif-1 10218 7.813 0.989 0.967 0.988 0.967 0.980 0.980 0.968 0.974 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
3. T12D8.8 hip-1 18283 7.813 0.970 0.972 0.980 0.972 0.989 0.977 0.967 0.986 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
4. D2013.7 eif-3.F 21004 7.813 0.967 0.972 0.973 0.972 0.987 0.985 0.975 0.982 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
5. T27F7.3 eif-1 28176 7.812 0.969 0.976 0.979 0.976 0.989 0.977 0.973 0.973 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
6. T20H4.3 pars-1 8167 7.803 0.967 0.975 0.966 0.975 0.966 0.989 0.985 0.980 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
7. F22D6.3 nars-1 18624 7.797 0.975 0.975 0.979 0.975 0.990 0.979 0.965 0.959 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
8. F57B9.5 byn-1 58236 7.795 0.974 0.984 0.962 0.984 0.985 0.974 0.971 0.961 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
9. K04G2.1 iftb-1 12590 7.787 0.957 0.977 0.974 0.977 0.982 0.980 0.981 0.959 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
10. H19N07.1 erfa-3 19869 7.786 0.986 0.977 0.985 0.977 0.993 0.987 0.936 0.945 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
11. Y116A8C.35 uaf-2 13808 7.786 0.982 0.973 0.976 0.973 0.984 0.972 0.962 0.964 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
12. K04D7.2 mspn-1 48187 7.784 0.960 0.962 0.973 0.962 0.986 0.993 0.973 0.975 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
13. T27E9.7 abcf-2 40273 7.776 0.969 0.974 0.988 0.974 0.980 0.950 0.974 0.967 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
14. C56C10.8 icd-1 89788 7.775 0.966 0.979 0.953 0.979 0.982 0.972 0.958 0.986 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
15. Y54E10A.9 vbh-1 28746 7.773 0.974 0.980 0.988 0.980 0.986 0.961 0.951 0.953 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
16. F36A4.7 ama-1 13620 7.773 0.945 0.984 0.989 0.984 0.994 0.983 0.936 0.958 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
17. Y39G10AR.9 Y39G10AR.9 3972 7.771 0.978 0.939 0.980 0.939 0.984 0.989 0.975 0.987
18. F39B2.10 dnj-12 35162 7.77 0.983 0.985 0.985 0.985 0.963 0.965 0.953 0.951 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
19. C34E10.5 prmt-5 12277 7.77 0.974 0.982 0.988 0.982 0.971 0.965 0.949 0.959 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
20. H06H21.3 eif-1.A 40990 7.766 0.977 0.983 0.982 0.983 0.964 0.975 0.958 0.944 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
21. F26F4.10 rars-1 9971 7.764 0.976 0.951 0.980 0.951 0.990 0.993 0.955 0.968 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
22. C47D12.6 tars-1 23488 7.763 0.972 0.960 0.962 0.960 0.994 0.988 0.947 0.980 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
23. C50C3.6 prp-8 19582 7.763 0.969 0.978 0.974 0.978 0.995 0.960 0.949 0.960 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
24. T08B2.9 fars-1 12650 7.762 0.963 0.976 0.974 0.976 0.947 0.986 0.973 0.967 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
25. T16G1.11 eif-3.K 14014 7.761 0.981 0.971 0.975 0.971 0.985 0.972 0.957 0.949 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
26. B0511.10 eif-3.E 10041 7.759 0.966 0.974 0.955 0.974 0.958 0.984 0.969 0.979 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
27. B0464.1 dars-1 12331 7.756 0.970 0.960 0.976 0.960 0.985 0.976 0.971 0.958 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
28. T05H4.6 erfa-1 12542 7.755 0.959 0.966 0.977 0.966 0.987 0.970 0.957 0.973 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
29. C09D4.5 rpl-19 56944 7.754 0.945 0.963 0.965 0.963 0.991 0.987 0.966 0.974 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
30. ZK616.6 perm-3 16186 7.754 0.967 0.966 0.978 0.966 0.982 0.982 0.965 0.948 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
31. C26D10.2 hel-1 28697 7.753 0.975 0.979 0.985 0.979 0.977 0.938 0.970 0.950 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
32. C53D5.6 imb-3 28921 7.751 0.979 0.987 0.982 0.987 0.991 0.944 0.940 0.941 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
33. T17E9.2 nmt-1 8017 7.751 0.960 0.977 0.981 0.977 0.981 0.964 0.944 0.967 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
34. T11G6.1 hars-1 7908 7.746 0.965 0.978 0.977 0.978 0.968 0.969 0.943 0.968 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
35. F17C11.9 eef-1G 37911 7.745 0.964 0.971 0.963 0.971 0.972 0.968 0.961 0.975 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
36. K07A12.7 mrps-15 6325 7.742 0.962 0.974 0.954 0.974 0.976 0.975 0.973 0.954 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
37. T23D8.4 eif-3.C 15343 7.742 0.960 0.973 0.978 0.973 0.978 0.968 0.940 0.972 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
38. F42A6.7 hrp-1 28201 7.741 0.981 0.957 0.974 0.957 0.976 0.967 0.953 0.976 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
39. Y48G8AL.6 smg-2 12561 7.739 0.974 0.965 0.962 0.965 0.980 0.975 0.962 0.956 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
40. T12D8.2 drr-2 16208 7.736 0.965 0.967 0.982 0.967 0.977 0.956 0.977 0.945 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
41. T10F2.4 prp-19 11298 7.736 0.974 0.972 0.972 0.972 0.989 0.956 0.944 0.957 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
42. Y111B2A.18 rsp-3 43731 7.734 0.975 0.961 0.953 0.961 0.984 0.963 0.974 0.963 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
43. F13G3.4 dylt-1 21345 7.733 0.961 0.974 0.973 0.974 0.972 0.985 0.936 0.958 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
44. Y65B4BR.5 icd-2 58321 7.733 0.956 0.972 0.974 0.972 0.979 0.967 0.949 0.964 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
45. C18D11.4 rsp-8 18308 7.731 0.963 0.965 0.957 0.965 0.987 0.966 0.956 0.972 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
46. B0205.7 kin-3 29775 7.731 0.977 0.982 0.974 0.982 0.973 0.964 0.920 0.959 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
47. K01C8.10 cct-4 15077 7.729 0.978 0.969 0.973 0.969 0.975 0.935 0.959 0.971 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
48. Y102A5A.1 cand-1 11808 7.727 0.968 0.952 0.980 0.952 0.984 0.981 0.951 0.959 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
49. K04D7.1 rack-1 48949 7.726 0.936 0.960 0.958 0.960 0.984 0.978 0.972 0.978 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
50. C15H11.4 dhs-22 21674 7.721 0.962 0.963 0.959 0.963 0.981 0.984 0.941 0.968 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
51. R07G3.5 pgam-5 11646 7.721 0.953 0.969 0.977 0.969 0.960 0.978 0.968 0.947 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
52. F08F8.3 kap-1 31437 7.72 0.979 0.961 0.983 0.961 0.984 0.957 0.936 0.959 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
53. F45H11.2 ned-8 13247 7.719 0.963 0.957 0.951 0.957 0.984 0.966 0.963 0.978 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
54. Y113G7B.23 swsn-1 13766 7.716 0.969 0.954 0.955 0.954 0.976 0.978 0.954 0.976 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
55. R13F6.10 cra-1 11610 7.711 0.970 0.976 0.977 0.976 0.987 0.960 0.925 0.940 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
56. C34E10.1 gop-3 11393 7.707 0.961 0.962 0.983 0.962 0.986 0.945 0.953 0.955 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
57. Y39A1C.3 cey-4 50694 7.707 0.964 0.966 0.959 0.966 0.977 0.967 0.934 0.974 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
58. Y61A9LA.8 sut-2 11388 7.706 0.974 0.964 0.955 0.964 0.993 0.956 0.924 0.976 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
59. T02G5.9 kars-1 9763 7.705 0.963 0.971 0.966 0.971 0.968 0.958 0.953 0.955 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
60. F28H1.3 aars-2 13537 7.705 0.977 0.981 0.969 0.981 0.959 0.969 0.916 0.953 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
61. Y39G8C.1 xrn-1 7488 7.704 0.966 0.961 0.964 0.961 0.963 0.986 0.953 0.950 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
62. C41D11.2 eif-3.H 7520 7.704 0.952 0.953 0.968 0.953 0.973 0.989 0.959 0.957 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
63. Y73B6BL.6 sqd-1 41708 7.701 0.968 0.960 0.972 0.960 0.980 0.965 0.934 0.962 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
64. C27D11.1 egl-45 28282 7.7 0.966 0.969 0.985 0.969 0.970 0.934 0.952 0.955 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
65. F58D5.1 hrp-2 17211 7.698 0.979 0.971 0.972 0.971 0.961 0.965 0.920 0.959 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
66. F22B5.9 fars-3 7209 7.697 0.978 0.958 0.974 0.958 0.974 0.963 0.941 0.951 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
67. B0336.9 swp-1 52442 7.697 0.946 0.955 0.954 0.955 0.976 0.985 0.961 0.965 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
68. B0025.2 csn-2 5205 7.696 0.943 0.971 0.953 0.971 0.968 0.959 0.964 0.967 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
69. T01G9.6 kin-10 27360 7.695 0.971 0.975 0.977 0.975 0.978 0.957 0.908 0.954 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
70. C32E8.2 rpl-13 70096 7.694 0.936 0.962 0.935 0.962 0.983 0.977 0.974 0.965 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
71. T10F2.1 gars-1 7204 7.693 0.974 0.967 0.974 0.967 0.972 0.959 0.925 0.955 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
72. F53A3.3 rps-22 81093 7.692 0.951 0.954 0.940 0.954 0.978 0.988 0.958 0.969 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
73. H21P03.1 mbf-1 25586 7.689 0.976 0.973 0.981 0.973 0.962 0.961 0.911 0.952 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
74. Y67D8C.5 eel-1 30623 7.689 0.962 0.977 0.986 0.977 0.972 0.924 0.922 0.969 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
75. F56B3.12 skr-18 6534 7.688 0.957 0.969 0.968 0.969 0.969 0.953 0.964 0.939 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
76. F25H5.4 eef-2 34846 7.688 0.964 0.957 0.931 0.957 0.982 0.963 0.958 0.976 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
77. M03C11.5 ymel-1 6878 7.688 0.964 0.964 0.972 0.964 0.951 0.970 0.951 0.952 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
78. F45H11.3 hpo-35 8299 7.687 0.960 0.982 0.972 0.982 0.969 0.957 0.974 0.891
79. Y47G6A.20 rnp-6 5542 7.687 0.974 0.946 0.956 0.946 0.972 0.972 0.953 0.968 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
80. C08B11.5 sap-49 10553 7.685 0.966 0.963 0.972 0.963 0.984 0.956 0.958 0.923 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
81. Y54E2A.11 eif-3.B 13795 7.685 0.969 0.974 0.975 0.974 0.964 0.931 0.962 0.936 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
82. K01G5.4 ran-1 32379 7.684 0.967 0.972 0.955 0.972 0.965 0.966 0.944 0.943 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
83. F21C3.3 hint-1 7078 7.684 0.957 0.972 0.951 0.972 0.980 0.971 0.935 0.946 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
84. C06E7.1 sams-3 26921 7.683 0.974 0.982 0.982 0.982 0.983 0.934 0.935 0.911 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
85. F35G12.2 idhg-1 30065 7.682 0.972 0.982 0.971 0.982 0.958 0.941 0.938 0.938 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
86. R144.7 larp-1 24669 7.681 0.959 0.967 0.950 0.967 0.985 0.967 0.928 0.958 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
87. JC8.3 rpl-12 52728 7.68 0.946 0.952 0.924 0.952 0.987 0.971 0.970 0.978 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
88. F54H12.6 eef-1B.1 37095 7.679 0.955 0.948 0.942 0.948 0.993 0.971 0.954 0.968 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
89. C43E11.1 acin-1 7781 7.678 0.956 0.963 0.964 0.963 0.984 0.952 0.957 0.939 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
90. T21C9.12 scpl-4 14723 7.677 0.947 0.976 0.968 0.976 0.981 0.964 0.931 0.934 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
91. W04D2.5 mrps-11 5757 7.677 0.980 0.960 0.979 0.960 0.967 0.946 0.941 0.944 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
92. F56F3.5 rps-1 85503 7.675 0.927 0.970 0.919 0.970 0.978 0.992 0.961 0.958 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
93. C18E9.6 tomm-40 13426 7.675 0.966 0.957 0.955 0.957 0.983 0.969 0.951 0.937 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
94. D2089.1 rsp-7 11057 7.675 0.944 0.973 0.968 0.973 0.969 0.969 0.926 0.953 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
95. F42A10.1 abcf-3 5557 7.675 0.948 0.940 0.979 0.940 0.979 0.984 0.972 0.933 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
96. F26D10.3 hsp-1 98277 7.674 0.966 0.976 0.962 0.976 0.931 0.977 0.920 0.966 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
97. K04G7.10 rnp-7 11219 7.672 0.967 0.975 0.964 0.975 0.981 0.971 0.920 0.919 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
98. W09C5.7 W09C5.7 2359 7.672 0.970 0.914 0.977 0.914 0.995 0.974 0.979 0.949
99. Y48A6B.13 spat-2 21773 7.672 0.960 0.948 0.977 0.948 0.979 0.974 0.924 0.962 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
100. K11D12.2 pqn-51 15951 7.671 0.971 0.966 0.963 0.966 0.979 0.989 0.892 0.945 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]

There are 2521 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA