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Results for F28B3.8

Gene ID Gene Name Reads Transcripts Annotation
F28B3.8 imb-1 7515 F28B3.8 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]

Genes with expression patterns similar to F28B3.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28B3.8 imb-1 7515 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
2. F23F1.1 nfyc-1 9983 7.776 0.963 0.985 0.969 0.985 0.979 0.974 0.979 0.942 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
3. K01G5.4 ran-1 32379 7.759 0.965 0.975 0.983 0.975 0.970 0.958 0.965 0.968 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
4. Y71G12B.9 lin-65 7476 7.751 0.973 0.981 0.982 0.981 0.959 0.963 0.953 0.959 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
5. K02F2.3 teg-4 3873 7.739 0.962 0.969 0.954 0.969 0.967 0.974 0.968 0.976 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
6. ZK328.2 eftu-2 7040 7.738 0.942 0.979 0.974 0.979 0.973 0.971 0.948 0.972 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
7. C26E6.4 rpb-2 7053 7.733 0.948 0.985 0.954 0.985 0.957 0.963 0.978 0.963 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
8. Y46G5A.4 snrp-200 13827 7.72 0.953 0.981 0.946 0.981 0.967 0.969 0.970 0.953 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
9. C43E11.1 acin-1 7781 7.719 0.969 0.970 0.974 0.970 0.958 0.973 0.929 0.976 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
10. F32A5.7 lsm-4 3785 7.718 0.946 0.969 0.967 0.969 0.985 0.945 0.970 0.967 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
11. C34E10.5 prmt-5 12277 7.717 0.938 0.980 0.965 0.980 0.948 0.986 0.965 0.955 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
12. F56D2.6 ddx-15 12282 7.712 0.959 0.976 0.952 0.976 0.951 0.953 0.970 0.975 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
13. T10F2.4 prp-19 11298 7.711 0.927 0.982 0.968 0.982 0.964 0.958 0.955 0.975 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
14. F42A6.7 hrp-1 28201 7.71 0.949 0.960 0.958 0.960 0.970 0.961 0.978 0.974 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
15. K08F11.3 cif-1 10218 7.706 0.944 0.967 0.952 0.967 0.958 0.972 0.971 0.975 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
16. F56D1.7 daz-1 23684 7.705 0.960 0.982 0.961 0.982 0.947 0.961 0.954 0.958 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
17. C33H5.12 rsp-6 23342 7.705 0.956 0.976 0.965 0.976 0.977 0.939 0.962 0.954 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
18. C06A1.5 rpb-6 7515 7.704 0.938 0.975 0.969 0.975 0.980 0.925 0.973 0.969 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
19. F32H2.1 snpc-4 7581 7.702 0.968 0.973 0.954 0.973 0.956 0.960 0.973 0.945 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
20. R13F6.10 cra-1 11610 7.702 0.949 0.982 0.963 0.982 0.964 0.967 0.946 0.949 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
21. Y54E5A.4 npp-4 6288 7.7 0.933 0.969 0.957 0.969 0.964 0.980 0.964 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
22. ZK742.1 xpo-1 20741 7.7 0.947 0.980 0.971 0.980 0.975 0.936 0.954 0.957 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
23. W02B12.3 rsp-1 9235 7.698 0.956 0.979 0.970 0.979 0.956 0.958 0.955 0.945 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
24. F32E10.6 cec-5 10643 7.698 0.964 0.980 0.945 0.980 0.956 0.978 0.945 0.950 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
25. F58D5.1 hrp-2 17211 7.697 0.967 0.975 0.935 0.975 0.961 0.963 0.967 0.954 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
26. F28H1.3 aars-2 13537 7.694 0.949 0.986 0.959 0.986 0.969 0.934 0.966 0.945 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
27. T28D9.2 rsp-5 6460 7.692 0.958 0.971 0.945 0.971 0.968 0.953 0.973 0.953 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
28. F26F4.10 rars-1 9971 7.689 0.959 0.963 0.972 0.963 0.949 0.974 0.973 0.936 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
29. Y111B2A.18 rsp-3 43731 7.686 0.940 0.972 0.972 0.972 0.967 0.933 0.959 0.971 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
30. K02F3.11 rnp-5 6205 7.682 0.949 0.976 0.959 0.976 0.958 0.973 0.936 0.955 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
31. K12C11.2 smo-1 12784 7.681 0.949 0.952 0.965 0.952 0.964 0.964 0.979 0.956 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
32. Y53C12B.3 nos-3 20231 7.679 0.947 0.980 0.937 0.980 0.953 0.943 0.962 0.977 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
33. T23H2.1 npp-12 12425 7.678 0.963 0.972 0.972 0.972 0.950 0.954 0.965 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
34. F22D6.3 nars-1 18624 7.678 0.946 0.977 0.967 0.977 0.956 0.963 0.944 0.948 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
35. Y23H5B.6 Y23H5B.6 5886 7.676 0.943 0.972 0.964 0.972 0.937 0.956 0.955 0.977
36. C53D5.6 imb-3 28921 7.674 0.938 0.981 0.956 0.981 0.942 0.953 0.973 0.950 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
37. Y110A7A.8 prp-31 4436 7.674 0.960 0.969 0.950 0.969 0.953 0.986 0.950 0.937 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
38. F32H2.4 thoc-3 3861 7.671 0.937 0.980 0.954 0.980 0.960 0.968 0.945 0.947 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
39. T19B4.2 npp-7 13073 7.669 0.932 0.971 0.945 0.971 0.961 0.977 0.973 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
40. C48B4.11 C48B4.11 4384 7.667 0.937 0.971 0.970 0.971 0.950 0.937 0.966 0.965
41. Y65B4BL.2 deps-1 18277 7.664 0.955 0.982 0.959 0.982 0.956 0.963 0.945 0.922
42. F58E10.3 ddx-17 15107 7.663 0.951 0.974 0.961 0.974 0.962 0.937 0.947 0.957 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
43. W01G7.3 rpb-11 7826 7.66 0.921 0.967 0.960 0.967 0.953 0.964 0.980 0.948 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
44. T08B2.9 fars-1 12650 7.66 0.923 0.978 0.939 0.978 0.983 0.958 0.973 0.928 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
45. Y110A7A.19 let-630 3830 7.659 0.950 0.957 0.952 0.957 0.975 0.973 0.967 0.928
46. T01E8.6 mrps-14 9328 7.657 0.898 0.975 0.932 0.975 0.970 0.972 0.978 0.957 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
47. B0414.3 hil-5 10816 7.656 0.956 0.957 0.978 0.957 0.969 0.935 0.953 0.951 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
48. ZK1058.4 ccdc-47 8879 7.654 0.943 0.985 0.944 0.985 0.960 0.951 0.949 0.937 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
49. K08F4.2 gtbp-1 25222 7.651 0.926 0.973 0.952 0.973 0.984 0.932 0.936 0.975 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
50. Y37E3.15 npp-13 7250 7.651 0.973 0.958 0.949 0.958 0.944 0.937 0.972 0.960 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
51. F33D4.5 mrpl-1 5337 7.651 0.932 0.973 0.955 0.973 0.977 0.928 0.948 0.965 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
52. Y18D10A.1 attf-6 6942 7.65 0.931 0.971 0.936 0.971 0.973 0.970 0.958 0.940 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
53. F18C5.2 wrn-1 3792 7.65 0.955 0.976 0.948 0.976 0.971 0.969 0.949 0.906 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
54. Y38A8.3 ulp-2 7403 7.65 0.965 0.968 0.964 0.968 0.960 0.971 0.945 0.909 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
55. Y37D8A.9 mrg-1 14369 7.65 0.956 0.967 0.931 0.967 0.955 0.938 0.958 0.978 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
56. E01A2.4 let-504 9788 7.65 0.972 0.968 0.960 0.968 0.964 0.967 0.941 0.910
57. C08B11.5 sap-49 10553 7.648 0.926 0.971 0.942 0.971 0.967 0.964 0.969 0.938 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
58. Y47D3A.26 smc-3 6256 7.648 0.960 0.969 0.959 0.969 0.951 0.953 0.965 0.922 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
59. T16G1.11 eif-3.K 14014 7.648 0.933 0.975 0.952 0.975 0.946 0.943 0.968 0.956 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
60. T02G5.9 kars-1 9763 7.648 0.885 0.973 0.953 0.973 0.974 0.970 0.960 0.960 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
61. K11D12.2 pqn-51 15951 7.647 0.927 0.977 0.950 0.977 0.968 0.959 0.956 0.933 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
62. R07E5.14 rnp-4 11659 7.645 0.940 0.970 0.966 0.970 0.959 0.923 0.944 0.973 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
63. C48E7.3 lpd-2 10330 7.645 0.926 0.983 0.966 0.983 0.929 0.953 0.951 0.954 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
64. B0025.2 csn-2 5205 7.645 0.944 0.977 0.959 0.977 0.952 0.943 0.967 0.926 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
65. F53F10.5 npp-11 3378 7.645 0.946 0.960 0.951 0.960 0.963 0.952 0.955 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
66. R12C12.2 ran-5 14517 7.644 0.956 0.966 0.962 0.966 0.952 0.957 0.963 0.922 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
67. R09B3.5 mag-1 7496 7.644 0.912 0.970 0.963 0.970 0.975 0.960 0.943 0.951 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
68. T21B10.1 mrpl-50 14595 7.642 0.929 0.983 0.964 0.983 0.963 0.952 0.961 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
69. Y41D4B.19 npp-8 12992 7.642 0.979 0.971 0.962 0.971 0.959 0.953 0.959 0.888 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
70. C06E7.1 sams-3 26921 7.642 0.950 0.984 0.962 0.984 0.947 0.960 0.954 0.901 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
71. C18G1.5 hil-4 21692 7.64 0.953 0.962 0.956 0.962 0.957 0.963 0.948 0.939 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
72. C16C10.4 C16C10.4 3439 7.639 0.938 0.964 0.948 0.964 0.977 0.950 0.956 0.942 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
73. F36A2.1 cids-2 4551 7.639 0.948 0.978 0.963 0.978 0.933 0.951 0.984 0.904 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
74. W02F12.6 sna-1 7338 7.639 0.941 0.961 0.944 0.961 0.967 0.970 0.960 0.935 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
75. C52E4.6 cyl-1 6405 7.636 0.950 0.976 0.922 0.976 0.941 0.974 0.958 0.939 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
76. F59A2.1 npp-9 34375 7.636 0.971 0.959 0.959 0.959 0.951 0.941 0.942 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
77. F46A9.4 skr-2 16831 7.634 0.938 0.976 0.963 0.976 0.940 0.972 0.935 0.934 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
78. Y37D8A.11 cec-7 8801 7.634 0.943 0.977 0.962 0.977 0.958 0.940 0.954 0.923 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
79. Y116A8C.42 snr-1 17062 7.632 0.923 0.982 0.949 0.982 0.952 0.936 0.960 0.948 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
80. Y34D9A.1 mrpl-38 5291 7.631 0.940 0.971 0.936 0.971 0.943 0.973 0.963 0.934 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
81. C27H5.3 fust-1 6978 7.63 0.930 0.967 0.958 0.967 0.958 0.962 0.931 0.957 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
82. W06E11.4 sbds-1 6701 7.627 0.943 0.974 0.972 0.974 0.955 0.949 0.944 0.916 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
83. T09A5.8 cec-3 5813 7.627 0.936 0.951 0.921 0.951 0.961 0.986 0.954 0.967 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
84. F58F6.4 rfc-2 2074 7.626 0.956 0.956 0.948 0.956 0.965 0.943 0.946 0.956 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
85. C25D7.8 otub-1 7941 7.625 0.940 0.970 0.965 0.970 0.971 0.945 0.943 0.921 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
86. F52C9.7 mog-3 9880 7.625 0.963 0.961 0.939 0.961 0.965 0.976 0.976 0.884 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
87. T05H4.14 gad-1 7979 7.625 0.963 0.950 0.936 0.950 0.972 0.966 0.958 0.930 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
88. T12D8.2 drr-2 16208 7.624 0.940 0.976 0.954 0.976 0.920 0.974 0.937 0.947 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
89. ZK430.1 toe-1 2458 7.624 0.927 0.984 0.948 0.984 0.934 0.957 0.929 0.961 HEAT repeat-containing protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23495]
90. ZK652.1 snr-5 5993 7.624 0.864 0.973 0.977 0.973 0.961 0.964 0.928 0.984 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
91. C27H6.2 ruvb-1 6291 7.624 0.946 0.969 0.954 0.969 0.961 0.933 0.919 0.973 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
92. M01B12.5 riok-1 6698 7.623 0.909 0.977 0.961 0.977 0.953 0.949 0.949 0.948 Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
93. T12D8.8 hip-1 18283 7.622 0.927 0.970 0.959 0.970 0.937 0.948 0.955 0.956 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
94. T12E12.2 cec-6 4758 7.622 0.932 0.961 0.956 0.961 0.984 0.961 0.960 0.907 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
95. T10B5.5 cct-7 24616 7.621 0.938 0.974 0.954 0.974 0.961 0.922 0.949 0.949 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
96. T21D12.3 pqbp-1.1 5755 7.62 0.903 0.958 0.947 0.958 0.938 0.975 0.978 0.963 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
97. K03H1.2 mog-1 4057 7.619 0.943 0.970 0.963 0.970 0.972 0.969 0.916 0.916 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
98. ZC434.5 ears-1 4725 7.619 0.925 0.952 0.942 0.952 0.967 0.953 0.974 0.954 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
99. C15F1.4 ppp-1 1774 7.618 0.926 0.967 0.922 0.967 0.978 0.958 0.955 0.945 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
100. Y54E2A.3 tac-1 6308 7.617 0.939 0.948 0.958 0.948 0.976 0.969 0.972 0.907 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA