C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C47B2.4

Gene ID Gene Name Reads Transcripts Annotation
C47B2.4 pbs-2 19805 C47B2.4 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]

Genes with expression patterns similar to C47B2.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C47B2.4 pbs-2 19805 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
2. F39H11.5 pbs-7 13631 7.84 0.971 0.981 0.980 0.981 0.993 0.975 0.974 0.985 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
3. Y38A8.2 pbs-3 18117 7.822 0.970 0.967 0.984 0.967 0.993 0.984 0.978 0.979 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
4. K08D12.1 pbs-1 21677 7.803 0.981 0.975 0.968 0.975 0.977 0.979 0.964 0.984 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
5. ZK20.3 rad-23 35070 7.8 0.982 0.968 0.968 0.968 0.981 0.974 0.976 0.983
6. Y73B6BL.6 sqd-1 41708 7.792 0.984 0.986 0.966 0.986 0.969 0.980 0.967 0.954 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
7. CD4.6 pas-6 18332 7.781 0.976 0.977 0.962 0.977 0.985 0.953 0.963 0.988 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
8. K05C4.1 pbs-5 17648 7.775 0.986 0.983 0.974 0.983 0.991 0.989 0.928 0.941 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
9. C02F5.9 pbs-6 20120 7.769 0.971 0.982 0.976 0.982 0.975 0.956 0.948 0.979 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
10. F40G9.3 ubc-20 16785 7.766 0.972 0.974 0.971 0.974 0.970 0.970 0.963 0.972 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
11. C36B1.4 pas-4 13140 7.763 0.968 0.977 0.974 0.977 0.989 0.962 0.943 0.973 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
12. T12D8.6 mlc-5 19567 7.763 0.960 0.957 0.972 0.957 0.990 0.990 0.964 0.973 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
13. Y110A7A.14 pas-3 6831 7.76 0.974 0.975 0.963 0.975 0.986 0.973 0.943 0.971 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
14. Y113G7B.23 swsn-1 13766 7.752 0.969 0.961 0.976 0.961 0.976 0.974 0.963 0.972 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
15. B0205.7 kin-3 29775 7.751 0.982 0.956 0.949 0.956 0.978 0.987 0.982 0.961 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
16. F39B2.10 dnj-12 35162 7.747 0.984 0.979 0.952 0.979 0.993 0.956 0.961 0.943 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
17. Y116A8C.35 uaf-2 13808 7.745 0.959 0.982 0.977 0.982 0.978 0.952 0.963 0.952 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
18. F39B2.2 uev-1 13597 7.74 0.966 0.959 0.953 0.959 0.992 0.992 0.950 0.969 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
19. F35G12.2 idhg-1 30065 7.736 0.981 0.972 0.959 0.972 0.980 0.964 0.943 0.965 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
20. Y102A5A.1 cand-1 11808 7.735 0.974 0.973 0.975 0.973 0.964 0.971 0.942 0.963 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
21. F44A2.1 tag-153 16535 7.734 0.973 0.984 0.989 0.984 0.960 0.958 0.918 0.968
22. M7.1 let-70 85699 7.731 0.963 0.975 0.974 0.975 0.961 0.981 0.964 0.938 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
23. F19B6.2 ufd-1 15357 7.73 0.979 0.981 0.967 0.981 0.965 0.947 0.928 0.982 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
24. Y54E10A.9 vbh-1 28746 7.722 0.979 0.974 0.948 0.974 0.989 0.936 0.952 0.970 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
25. T21E12.4 dhc-1 20370 7.715 0.964 0.978 0.968 0.978 0.983 0.964 0.916 0.964 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
26. F31D4.3 fkb-6 21313 7.715 0.975 0.986 0.959 0.986 0.987 0.911 0.931 0.980 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
27. Y92C3B.2 uaf-1 14981 7.714 0.979 0.971 0.960 0.971 0.976 0.946 0.927 0.984 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
28. T27E9.7 abcf-2 40273 7.714 0.964 0.959 0.961 0.959 0.985 0.977 0.950 0.959 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
29. T01G9.6 kin-10 27360 7.711 0.959 0.976 0.930 0.976 0.988 0.972 0.940 0.970 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
30. F41E6.4 smk-1 22394 7.71 0.935 0.988 0.979 0.988 0.985 0.949 0.930 0.956 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
31. Y67D8C.5 eel-1 30623 7.709 0.963 0.969 0.957 0.969 0.978 0.978 0.942 0.953 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
32. T06D8.6 cchl-1 26292 7.709 0.975 0.977 0.980 0.977 0.986 0.904 0.927 0.983 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
33. C17E4.5 pabp-2 12843 7.708 0.954 0.973 0.967 0.973 0.976 0.960 0.946 0.959 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
34. T20F5.2 pbs-4 8985 7.705 0.966 0.963 0.978 0.963 0.976 0.952 0.931 0.976 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
35. Y48G8AL.6 smg-2 12561 7.705 0.957 0.975 0.958 0.975 0.979 0.940 0.953 0.968 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
36. F38H4.9 let-92 25368 7.705 0.984 0.962 0.961 0.962 0.986 0.973 0.939 0.938 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
37. F33D11.11 vpr-1 18001 7.702 0.936 0.975 0.977 0.975 0.984 0.981 0.956 0.918 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
38. C18D11.4 rsp-8 18308 7.702 0.955 0.972 0.974 0.972 0.981 0.957 0.967 0.924 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
39. C09G12.9 tsg-101 9451 7.696 0.978 0.965 0.984 0.965 0.960 0.962 0.959 0.923 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
40. R05F9.10 sgt-1 35541 7.696 0.967 0.965 0.966 0.965 0.966 0.971 0.936 0.960 Small Glutamine-rich Tetratrico repeat protein [Source:RefSeq peptide;Acc:NP_494893]
41. K04G2.1 iftb-1 12590 7.693 0.969 0.970 0.937 0.970 0.983 0.945 0.947 0.972 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
42. F25G6.9 F25G6.9 3071 7.692 0.968 0.945 0.979 0.945 0.982 0.979 0.962 0.932
43. T10C6.4 srx-44 8454 7.689 0.968 0.955 0.982 0.955 0.982 0.932 0.941 0.974 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
44. C47G2.5 saps-1 7555 7.689 0.925 0.964 0.975 0.964 0.983 0.968 0.971 0.939 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
45. T01G1.3 sec-31 10504 7.689 0.959 0.969 0.985 0.969 0.974 0.965 0.929 0.939 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
46. H06H21.3 eif-1.A 40990 7.684 0.969 0.970 0.922 0.970 0.983 0.970 0.938 0.962 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
47. C50C3.6 prp-8 19582 7.683 0.953 0.972 0.953 0.972 0.973 0.955 0.953 0.952 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
48. M117.2 par-5 64868 7.683 0.971 0.957 0.929 0.957 0.975 0.976 0.951 0.967 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
49. F23F1.8 rpt-4 14303 7.683 0.979 0.967 0.976 0.967 0.961 0.938 0.917 0.978 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
50. F55C5.8 srpa-68 6665 7.681 0.980 0.970 0.962 0.970 0.981 0.954 0.956 0.908 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
51. ZK652.3 ufm-1 12647 7.676 0.967 0.977 0.951 0.977 0.974 0.971 0.969 0.890 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
52. F10G7.8 rpn-5 16014 7.676 0.962 0.970 0.988 0.970 0.971 0.897 0.934 0.984 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
53. C15H11.4 dhs-22 21674 7.673 0.976 0.959 0.987 0.959 0.963 0.969 0.949 0.911 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
54. F49E8.3 pam-1 25149 7.673 0.972 0.957 0.979 0.957 0.977 0.948 0.920 0.963
55. F58G11.1 letm-1 13414 7.673 0.954 0.963 0.969 0.963 0.971 0.979 0.921 0.953 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
56. F36H9.3 dhs-13 21659 7.672 0.985 0.966 0.959 0.966 0.942 0.962 0.932 0.960 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
57. W03F9.5 ttb-1 8682 7.671 0.977 0.970 0.991 0.970 0.974 0.947 0.919 0.923 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
58. C27D11.1 egl-45 28282 7.667 0.957 0.954 0.938 0.954 0.980 0.942 0.951 0.991 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
59. Y71D11A.2 smr-1 4976 7.665 0.943 0.962 0.974 0.962 0.977 0.928 0.968 0.951 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
60. ZK287.5 rbx-1 13546 7.661 0.954 0.956 0.977 0.956 0.969 0.929 0.940 0.980 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
61. T27F7.3 eif-1 28176 7.661 0.958 0.955 0.936 0.955 0.984 0.964 0.966 0.943 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
62. D1054.2 pas-2 11518 7.66 0.980 0.945 0.946 0.945 0.976 0.968 0.923 0.977 Proteasome subunit alpha type-2 [Source:UniProtKB/Swiss-Prot;Acc:Q27488]
63. R07G3.5 pgam-5 11646 7.66 0.962 0.973 0.980 0.973 0.965 0.939 0.940 0.928 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
64. F59B2.7 rab-6.1 10749 7.656 0.974 0.945 0.983 0.945 0.987 0.907 0.954 0.961 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
65. Y119D3B.15 dss-1 19116 7.656 0.970 0.961 0.973 0.961 0.979 0.961 0.877 0.974 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
66. R01H2.6 ubc-18 13394 7.655 0.971 0.960 0.946 0.960 0.987 0.933 0.922 0.976 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
67. Y54E2A.11 eif-3.B 13795 7.652 0.960 0.962 0.942 0.962 0.979 0.931 0.935 0.981 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
68. K10C3.2 ensa-1 19836 7.652 0.957 0.966 0.981 0.966 0.958 0.949 0.955 0.920 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
69. F39B2.11 mtx-1 8526 7.652 0.983 0.950 0.968 0.950 0.970 0.965 0.948 0.918 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
70. Y56A3A.20 ccf-1 18463 7.652 0.969 0.969 0.975 0.969 0.970 0.942 0.962 0.896 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
71. T06D8.8 rpn-9 11282 7.652 0.959 0.933 0.967 0.933 0.972 0.965 0.940 0.983 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
72. C47D12.6 tars-1 23488 7.651 0.983 0.970 0.954 0.970 0.964 0.929 0.929 0.952 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
73. F26F4.10 rars-1 9971 7.65 0.975 0.969 0.968 0.969 0.965 0.944 0.927 0.933 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
74. B0464.5 spk-1 35112 7.649 0.969 0.982 0.964 0.982 0.952 0.963 0.913 0.924 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
75. C13B4.2 usp-14 9000 7.648 0.952 0.961 0.974 0.961 0.969 0.908 0.938 0.985 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
76. Y18D10A.20 pfn-1 33871 7.648 0.925 0.947 0.966 0.947 0.974 0.979 0.927 0.983 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
77. Y32F6A.3 pap-1 11972 7.648 0.945 0.962 0.964 0.962 0.975 0.949 0.941 0.950 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
78. T12D8.8 hip-1 18283 7.647 0.949 0.954 0.946 0.954 0.983 0.944 0.961 0.956 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
79. Y77E11A.13 npp-20 5777 7.644 0.977 0.941 0.977 0.941 0.981 0.976 0.929 0.922 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
80. T04A8.14 emb-5 11746 7.644 0.943 0.972 0.988 0.972 0.951 0.957 0.926 0.935 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
81. H19N07.2 math-33 10570 7.644 0.971 0.969 0.974 0.969 0.968 0.910 0.912 0.971 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
82. C08B11.7 ubh-4 3186 7.643 0.971 0.965 0.971 0.965 0.970 0.923 0.930 0.948 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
83. F26E4.1 sur-6 16191 7.642 0.926 0.964 0.978 0.964 0.979 0.950 0.936 0.945 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
84. D2089.1 rsp-7 11057 7.641 0.944 0.970 0.978 0.970 0.983 0.936 0.915 0.945 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
85. F57B9.5 byn-1 58236 7.641 0.979 0.971 0.880 0.971 0.975 0.946 0.950 0.969 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
86. K02F2.1 dpf-3 11465 7.641 0.935 0.969 0.986 0.969 0.979 0.941 0.956 0.906 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
87. Y40B1B.5 eif-3.J 15061 7.641 0.974 0.965 0.956 0.965 0.974 0.948 0.923 0.936 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
88. T10F2.1 gars-1 7204 7.64 0.970 0.977 0.962 0.977 0.962 0.933 0.905 0.954 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
89. F08F8.3 kap-1 31437 7.639 0.985 0.978 0.956 0.978 0.964 0.953 0.925 0.900 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
90. ZK328.5 npp-10 7652 7.639 0.905 0.981 0.958 0.981 0.990 0.929 0.944 0.951 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
91. T27A3.2 usp-5 11388 7.638 0.974 0.971 0.981 0.971 0.931 0.945 0.910 0.955 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
92. Y54E10A.3 txl-1 5426 7.638 0.972 0.965 0.963 0.965 0.967 0.941 0.924 0.941 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
93. D1014.3 snap-1 16776 7.636 0.946 0.965 0.978 0.965 0.992 0.984 0.936 0.870 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
94. R144.4 wip-1 14168 7.635 0.939 0.959 0.982 0.959 0.976 0.984 0.928 0.908 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
95. ZC518.2 sec-24.2 13037 7.635 0.972 0.973 0.953 0.973 0.973 0.936 0.925 0.930 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
96. K01C8.10 cct-4 15077 7.633 0.959 0.984 0.961 0.984 0.950 0.900 0.942 0.953 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
97. H19N07.1 erfa-3 19869 7.633 0.969 0.983 0.967 0.983 0.959 0.954 0.916 0.902 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
98. ZK616.6 perm-3 16186 7.633 0.975 0.959 0.960 0.959 0.950 0.940 0.957 0.933 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
99. Y111B2A.18 rsp-3 43731 7.632 0.969 0.966 0.963 0.966 0.969 0.924 0.938 0.937 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
100. F01G4.3 skih-2 3353 7.632 0.926 0.986 0.975 0.986 0.967 0.920 0.922 0.950 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]

There are 3051 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA