C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R08D7.5

Gene ID Gene Name Reads Transcripts Annotation
R08D7.5 R08D7.5 1719 R08D7.5 Uncharacterized calcium-binding protein R08D7.5 [Source:UniProtKB/Swiss-Prot;Acc:P30644]

Genes with expression patterns similar to R08D7.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R08D7.5 R08D7.5 1719 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Uncharacterized calcium-binding protein R08D7.5 [Source:UniProtKB/Swiss-Prot;Acc:P30644]
2. T01E8.6 mrps-14 9328 7.517 0.943 0.938 0.917 0.938 0.929 0.971 0.935 0.946 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
3. K03B4.2 K03B4.2 21796 7.517 0.933 0.956 0.906 0.956 0.919 0.941 0.954 0.952
4. F22D6.3 nars-1 18624 7.511 0.942 0.949 0.912 0.949 0.903 0.973 0.922 0.961 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
5. T08B2.9 fars-1 12650 7.507 0.947 0.939 0.919 0.939 0.892 0.965 0.945 0.961 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
6. T16G1.11 eif-3.K 14014 7.486 0.943 0.939 0.915 0.939 0.893 0.961 0.940 0.956 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
7. F33D4.7 emc-6 6534 7.481 0.916 0.928 0.925 0.928 0.926 0.950 0.939 0.969 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
8. C33H5.12 rsp-6 23342 7.48 0.909 0.972 0.882 0.972 0.897 0.974 0.916 0.958 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
9. T09A5.7 T09A5.7 5907 7.472 0.947 0.939 0.890 0.939 0.934 0.956 0.938 0.929
10. F42A6.7 hrp-1 28201 7.471 0.934 0.937 0.905 0.937 0.920 0.967 0.940 0.931 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
11. T19B4.2 npp-7 13073 7.47 0.917 0.944 0.912 0.944 0.909 0.958 0.931 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
12. Y38A8.3 ulp-2 7403 7.459 0.920 0.937 0.934 0.937 0.917 0.957 0.910 0.947 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
13. R06A4.9 pfs-2 4733 7.458 0.956 0.931 0.871 0.931 0.909 0.983 0.924 0.953 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
14. C34E10.5 prmt-5 12277 7.457 0.921 0.941 0.909 0.941 0.912 0.968 0.929 0.936 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
15. B0261.4 mrpl-47 8210 7.455 0.930 0.937 0.913 0.937 0.876 0.972 0.944 0.946 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
16. T06A10.4 lsy-13 7631 7.455 0.932 0.937 0.927 0.937 0.914 0.954 0.907 0.947
17. C52E4.6 cyl-1 6405 7.455 0.928 0.953 0.877 0.953 0.928 0.952 0.913 0.951 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
18. K08F11.3 cif-1 10218 7.454 0.957 0.939 0.903 0.939 0.879 0.962 0.942 0.933 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
19. F23F1.1 nfyc-1 9983 7.453 0.916 0.946 0.891 0.946 0.911 0.966 0.927 0.950 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
20. T02G5.9 kars-1 9763 7.449 0.916 0.937 0.894 0.937 0.925 0.960 0.935 0.945 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
21. C25D7.8 otub-1 7941 7.446 0.943 0.951 0.899 0.951 0.893 0.939 0.902 0.968 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
22. Y62E10A.11 mdt-9 5971 7.444 0.946 0.927 0.893 0.927 0.915 0.963 0.925 0.948 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
23. ZK381.1 him-3 4913 7.439 0.951 0.941 0.906 0.941 0.916 0.929 0.923 0.932 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
24. Y39G10AR.9 Y39G10AR.9 3972 7.437 0.942 0.932 0.914 0.932 0.903 0.954 0.936 0.924
25. C48E7.3 lpd-2 10330 7.436 0.909 0.964 0.901 0.964 0.912 0.952 0.901 0.933 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
26. F08F8.3 kap-1 31437 7.435 0.938 0.944 0.906 0.944 0.881 0.941 0.952 0.929 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
27. F56F3.1 ifet-1 25772 7.434 0.910 0.944 0.918 0.944 0.900 0.951 0.912 0.955 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
28. H19N07.1 erfa-3 19869 7.434 0.932 0.947 0.909 0.947 0.888 0.963 0.907 0.941 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
29. T17E9.2 nmt-1 8017 7.434 0.923 0.942 0.922 0.942 0.872 0.954 0.937 0.942 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
30. T21B10.1 mrpl-50 14595 7.432 0.938 0.939 0.910 0.939 0.889 0.990 0.897 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
31. ZK863.6 dpy-30 16177 7.432 0.905 0.950 0.918 0.950 0.895 0.954 0.887 0.973 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
32. ZK616.6 perm-3 16186 7.43 0.920 0.949 0.897 0.949 0.862 0.962 0.933 0.958 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
33. F52C9.7 mog-3 9880 7.429 0.902 0.941 0.896 0.941 0.920 0.953 0.931 0.945 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
34. F13G3.4 dylt-1 21345 7.428 0.918 0.934 0.916 0.934 0.887 0.944 0.931 0.964 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
35. Y116A8C.42 snr-1 17062 7.428 0.952 0.945 0.895 0.945 0.885 0.955 0.885 0.966 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
36. R144.7 larp-1 24669 7.428 0.900 0.938 0.901 0.938 0.927 0.963 0.930 0.931 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
37. R13F6.10 cra-1 11610 7.427 0.911 0.934 0.932 0.934 0.907 0.965 0.893 0.951 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
38. F58B3.5 mars-1 6729 7.427 0.922 0.937 0.906 0.937 0.929 0.970 0.900 0.926 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
39. B0511.8 mrps-30 5050 7.425 0.940 0.924 0.891 0.924 0.900 0.983 0.924 0.939 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
40. C28H8.9 dpff-1 8684 7.424 0.934 0.942 0.876 0.942 0.913 0.951 0.898 0.968 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
41. F41H10.4 F41H10.4 3295 7.424 0.887 0.930 0.938 0.930 0.928 0.951 0.916 0.944
42. Y56A3A.20 ccf-1 18463 7.424 0.890 0.935 0.917 0.935 0.901 0.960 0.937 0.949 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
43. D2013.7 eif-3.F 21004 7.424 0.943 0.928 0.896 0.928 0.911 0.959 0.938 0.921 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
44. K11D12.2 pqn-51 15951 7.423 0.906 0.930 0.891 0.930 0.924 0.960 0.923 0.959 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
45. Y46G5A.4 snrp-200 13827 7.423 0.876 0.945 0.912 0.945 0.900 0.965 0.929 0.951 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
46. B0464.1 dars-1 12331 7.423 0.949 0.923 0.894 0.923 0.888 0.943 0.950 0.953 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
47. T11G6.1 hars-1 7908 7.422 0.937 0.928 0.919 0.928 0.888 0.959 0.927 0.936 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
48. F22B5.9 fars-3 7209 7.421 0.925 0.916 0.920 0.916 0.886 0.968 0.930 0.960 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
49. F58E10.3 ddx-17 15107 7.42 0.912 0.950 0.900 0.950 0.867 0.983 0.906 0.952 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
50. F56D2.6 ddx-15 12282 7.42 0.930 0.934 0.906 0.934 0.883 0.971 0.921 0.941 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
51. F01F1.8 cct-6 29460 7.418 0.924 0.947 0.922 0.947 0.914 0.975 0.858 0.931 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
52. F58D5.1 hrp-2 17211 7.416 0.939 0.934 0.905 0.934 0.879 0.968 0.929 0.928 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
53. T10B5.5 cct-7 24616 7.415 0.922 0.937 0.904 0.937 0.906 0.972 0.898 0.939 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
54. C26E6.4 rpb-2 7053 7.415 0.916 0.942 0.907 0.942 0.867 0.976 0.926 0.939 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
55. B0035.12 sart-3 7188 7.414 0.953 0.957 0.913 0.957 0.881 0.950 0.891 0.912 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
56. F28H1.3 aars-2 13537 7.413 0.911 0.939 0.913 0.939 0.876 0.971 0.919 0.945 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
57. ZK1058.4 ccdc-47 8879 7.413 0.916 0.945 0.903 0.945 0.890 0.970 0.901 0.943 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
58. T23H2.1 npp-12 12425 7.411 0.931 0.919 0.875 0.919 0.902 0.974 0.923 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
59. W08E3.3 ola-1 20885 7.411 0.933 0.933 0.906 0.933 0.886 0.950 0.909 0.961 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
60. T05H4.6 erfa-1 12542 7.411 0.924 0.913 0.941 0.913 0.883 0.946 0.952 0.939 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
61. Y102A5A.1 cand-1 11808 7.41 0.897 0.941 0.897 0.941 0.924 0.945 0.953 0.912 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
62. Y111B2A.18 rsp-3 43731 7.407 0.913 0.928 0.893 0.928 0.886 0.959 0.953 0.947 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
63. F18A1.3 lir-1 2995 7.405 0.897 0.968 0.881 0.968 0.919 0.898 0.937 0.937 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
64. F42A10.1 abcf-3 5557 7.401 0.933 0.902 0.918 0.902 0.920 0.951 0.922 0.953 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
65. R07E5.11 R07E5.11 1170 7.4 0.888 0.937 0.885 0.937 0.948 0.892 0.945 0.968
66. Y56A3A.17 npp-16 5391 7.4 0.914 0.961 0.897 0.961 0.905 0.945 0.867 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
67. B0303.15 mrpl-11 9889 7.4 0.914 0.914 0.919 0.914 0.900 0.973 0.923 0.943 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
68. C18E9.6 tomm-40 13426 7.399 0.931 0.941 0.896 0.941 0.902 0.963 0.925 0.900 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
69. F56D1.7 daz-1 23684 7.399 0.934 0.965 0.906 0.965 0.881 0.911 0.917 0.920 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
70. Y37A1B.1 lst-3 10739 7.396 0.894 0.972 0.908 0.972 0.901 0.913 0.876 0.960 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
71. M88.7 cisd-3.1 5713 7.396 0.924 0.938 0.888 0.938 0.888 0.967 0.904 0.949 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
72. K01G5.4 ran-1 32379 7.393 0.927 0.947 0.860 0.947 0.868 0.968 0.921 0.955 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
73. F32H2.4 thoc-3 3861 7.393 0.874 0.936 0.906 0.936 0.937 0.946 0.898 0.960 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
74. K01G5.1 rnf-113 4336 7.392 0.935 0.908 0.886 0.908 0.898 0.955 0.929 0.973 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
75. B0205.11 mrpl-9 9162 7.392 0.930 0.915 0.956 0.915 0.886 0.939 0.905 0.946 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
76. C39E9.14 dli-1 5650 7.39 0.873 0.941 0.921 0.941 0.904 0.918 0.933 0.959 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
77. F32H2.1 snpc-4 7581 7.39 0.936 0.945 0.851 0.945 0.869 0.979 0.919 0.946 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
78. R119.4 pqn-59 16065 7.387 0.875 0.975 0.899 0.975 0.883 0.950 0.877 0.953 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
79. F26F4.10 rars-1 9971 7.386 0.919 0.926 0.911 0.926 0.895 0.959 0.945 0.905 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
80. F33D4.5 mrpl-1 5337 7.385 0.959 0.916 0.905 0.916 0.902 0.948 0.899 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
81. F36A2.1 cids-2 4551 7.383 0.874 0.944 0.870 0.944 0.907 0.940 0.929 0.975 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
82. W03B1.4 sars-2 2356 7.383 0.900 0.930 0.872 0.930 0.942 0.962 0.907 0.940 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
83. Y34D9A.1 mrpl-38 5291 7.382 0.911 0.931 0.892 0.931 0.885 0.964 0.930 0.938 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
84. R09B3.5 mag-1 7496 7.381 0.917 0.928 0.888 0.928 0.917 0.969 0.908 0.926 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
85. T10C6.4 srx-44 8454 7.381 0.911 0.957 0.885 0.957 0.881 0.928 0.936 0.926 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
86. F21C3.4 rde-2 6286 7.38 0.932 0.936 0.903 0.936 0.891 0.972 0.877 0.933
87. T01B7.3 rab-21 2347 7.38 0.872 0.940 0.945 0.940 0.893 0.962 0.926 0.902 RAB family [Source:RefSeq peptide;Acc:NP_495854]
88. Y39G8C.1 xrn-1 7488 7.379 0.913 0.915 0.919 0.915 0.953 0.921 0.932 0.911 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
89. F32A5.7 lsm-4 3785 7.379 0.930 0.944 0.858 0.944 0.919 0.970 0.910 0.904 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
90. Y65B4BR.5 icd-2 58321 7.378 0.930 0.928 0.915 0.928 0.875 0.955 0.929 0.918 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
91. Y71F9B.4 snr-7 13542 7.378 0.945 0.970 0.854 0.970 0.879 0.978 0.863 0.919 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
92. W06E11.4 sbds-1 6701 7.378 0.919 0.938 0.920 0.938 0.900 0.973 0.869 0.921 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
93. Y37D8A.11 cec-7 8801 7.377 0.950 0.939 0.916 0.939 0.876 0.948 0.883 0.926 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
94. C06A1.5 rpb-6 7515 7.376 0.939 0.926 0.900 0.926 0.917 0.964 0.915 0.889 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
95. Y110A7A.19 let-630 3830 7.376 0.939 0.934 0.888 0.934 0.911 0.922 0.894 0.954
96. C01F6.8 icln-1 6586 7.376 0.933 0.929 0.940 0.929 0.887 0.970 0.869 0.919 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
97. F32E10.6 cec-5 10643 7.376 0.896 0.957 0.896 0.957 0.876 0.960 0.888 0.946 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
98. C08B11.5 sap-49 10553 7.376 0.919 0.935 0.884 0.935 0.891 0.956 0.928 0.928 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
99. F54A3.3 cct-3 25183 7.375 0.926 0.949 0.906 0.949 0.902 0.970 0.878 0.895 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
100. ZC262.8 mrps-18A 3125 7.375 0.929 0.928 0.894 0.928 0.857 0.955 0.914 0.970 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]

There are 733 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA