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Results for F58B3.5

Gene ID Gene Name Reads Transcripts Annotation
F58B3.5 mars-1 6729 F58B3.5a, F58B3.5b, F58B3.5c Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]

Genes with expression patterns similar to F58B3.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F58B3.5 mars-1 6729 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
2. T02G5.9 kars-1 9763 7.754 0.971 0.970 0.963 0.970 0.990 0.991 0.960 0.939 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
3. T28D9.10 snr-3 9995 7.75 0.973 0.963 0.971 0.963 0.982 0.978 0.965 0.955 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
4. F22B5.9 fars-3 7209 7.736 0.982 0.967 0.969 0.967 0.964 0.987 0.962 0.938 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
5. F58D5.1 hrp-2 17211 7.735 0.962 0.981 0.962 0.981 0.955 0.980 0.948 0.966 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
6. Y116A8C.42 snr-1 17062 7.733 0.973 0.967 0.945 0.967 0.989 0.973 0.976 0.943 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
7. K08F4.2 gtbp-1 25222 7.733 0.973 0.978 0.959 0.978 0.975 0.966 0.967 0.937 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
8. T24H7.1 phb-2 28775 7.727 0.976 0.950 0.958 0.950 0.965 0.986 0.982 0.960 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
9. F28H1.3 aars-2 13537 7.719 0.959 0.971 0.943 0.971 0.973 0.983 0.956 0.963 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
10. T21B10.1 mrpl-50 14595 7.717 0.967 0.984 0.970 0.984 0.967 0.978 0.948 0.919 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
11. T06A10.4 lsy-13 7631 7.713 0.975 0.960 0.952 0.960 0.967 0.974 0.974 0.951
12. F55H2.6 clu-1 21404 7.706 0.918 0.967 0.966 0.967 0.967 0.981 0.968 0.972 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
13. W08E3.3 ola-1 20885 7.706 0.968 0.966 0.961 0.966 0.974 0.963 0.968 0.940 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
14. T08B2.9 fars-1 12650 7.705 0.971 0.963 0.957 0.963 0.961 0.977 0.968 0.945 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
15. Y37D8A.11 cec-7 8801 7.699 0.961 0.964 0.947 0.964 0.983 0.955 0.979 0.946 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
16. T03D8.2 mrps-12 8253 7.693 0.926 0.939 0.980 0.939 0.982 0.989 0.977 0.961 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
17. K08F11.3 cif-1 10218 7.692 0.975 0.972 0.981 0.972 0.950 0.986 0.940 0.916 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
18. T16G1.11 eif-3.K 14014 7.692 0.972 0.970 0.953 0.970 0.960 0.983 0.935 0.949 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
19. F29C4.6 tut-1 5637 7.691 0.971 0.948 0.965 0.948 0.983 0.982 0.948 0.946 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
20. C47B2.9 C47B2.9 4096 7.689 0.962 0.961 0.975 0.961 0.972 0.986 0.941 0.931
21. T01E8.6 mrps-14 9328 7.686 0.967 0.972 0.962 0.972 0.978 0.986 0.948 0.901 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
22. Y50D7A.9 taco-1 5949 7.685 0.964 0.960 0.962 0.960 0.974 0.983 0.962 0.920 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
23. F26F4.10 rars-1 9971 7.685 0.959 0.983 0.977 0.983 0.944 0.975 0.954 0.910 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
24. Y71G12B.9 lin-65 7476 7.683 0.932 0.970 0.940 0.970 0.986 0.987 0.973 0.925 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
25. T07D4.4 ddx-19 7234 7.682 0.952 0.941 0.984 0.941 0.957 0.971 0.963 0.973 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
26. C34E10.5 prmt-5 12277 7.681 0.967 0.970 0.969 0.970 0.977 0.988 0.934 0.906 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
27. C18E9.6 tomm-40 13426 7.678 0.956 0.988 0.943 0.988 0.955 0.983 0.934 0.931 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
28. T11G6.1 hars-1 7908 7.677 0.973 0.976 0.964 0.976 0.945 0.965 0.950 0.928 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
29. F56D12.5 vig-1 42594 7.676 0.942 0.972 0.943 0.972 0.973 0.970 0.942 0.962 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
30. F58E10.3 ddx-17 15107 7.675 0.960 0.965 0.951 0.965 0.960 0.962 0.942 0.970 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
31. R13F6.10 cra-1 11610 7.673 0.955 0.965 0.968 0.965 0.965 0.982 0.938 0.935 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
32. B0464.1 dars-1 12331 7.673 0.960 0.970 0.972 0.970 0.942 0.954 0.949 0.956 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
33. H19N07.1 erfa-3 19869 7.671 0.969 0.984 0.975 0.984 0.952 0.974 0.880 0.953 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
34. C56C10.8 icd-1 89788 7.671 0.949 0.958 0.958 0.958 0.950 0.967 0.979 0.952 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
35. Y37D8A.18 mrps-10 4551 7.67 0.959 0.932 0.983 0.932 0.977 0.981 0.949 0.957 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
36. Y37E3.15 npp-13 7250 7.67 0.952 0.939 0.952 0.939 0.986 0.972 0.958 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
37. T25G3.4 T25G3.4 9394 7.669 0.960 0.967 0.960 0.967 0.970 0.970 0.970 0.905 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
38. T28D9.2 rsp-5 6460 7.665 0.958 0.963 0.939 0.963 0.978 0.965 0.972 0.927 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
39. W06H3.3 ctps-1 8363 7.661 0.953 0.975 0.953 0.975 0.982 0.983 0.952 0.888 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
40. C34E10.11 mrps-26 4649 7.659 0.924 0.968 0.984 0.968 0.950 0.987 0.943 0.935 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
41. Y73B6BL.32 lsm-8 11002 7.659 0.973 0.969 0.970 0.969 0.982 0.949 0.959 0.888 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
42. Y53C12B.3 nos-3 20231 7.657 0.966 0.965 0.941 0.965 0.981 0.956 0.966 0.917 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
43. T10B5.5 cct-7 24616 7.656 0.944 0.984 0.942 0.984 0.970 0.963 0.942 0.927 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
44. D2013.7 eif-3.F 21004 7.656 0.969 0.975 0.974 0.975 0.945 0.963 0.933 0.922 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
45. F18E2.2 abcf-1 4708 7.653 0.946 0.951 0.946 0.951 0.971 0.974 0.962 0.952 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_506192]
46. F23F1.1 nfyc-1 9983 7.651 0.952 0.948 0.921 0.948 0.982 0.982 0.957 0.961 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
47. ZC434.5 ears-1 4725 7.65 0.929 0.976 0.945 0.976 0.983 0.976 0.969 0.896 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
48. F22D6.3 nars-1 18624 7.649 0.952 0.969 0.965 0.969 0.956 0.992 0.891 0.955 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
49. Y38A8.3 ulp-2 7403 7.648 0.948 0.949 0.955 0.949 0.976 0.984 0.919 0.968 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
50. F54A3.3 cct-3 25183 7.647 0.971 0.976 0.966 0.976 0.957 0.957 0.959 0.885 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
51. Y54E5A.4 npp-4 6288 7.647 0.974 0.940 0.917 0.940 0.977 0.982 0.952 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
52. Y46G5A.4 snrp-200 13827 7.646 0.929 0.950 0.944 0.950 0.975 0.983 0.945 0.970 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
53. C14A4.14 mrps-22 7966 7.646 0.947 0.964 0.976 0.964 0.971 0.958 0.949 0.917 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
54. T23H2.1 npp-12 12425 7.646 0.951 0.953 0.933 0.953 0.979 0.987 0.946 0.944 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
55. C08F8.1 pfd-1 10199 7.645 0.951 0.953 0.969 0.953 0.977 0.972 0.975 0.895 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
56. ZK863.6 dpy-30 16177 7.644 0.951 0.958 0.966 0.958 0.972 0.947 0.940 0.952 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
57. T21B10.7 cct-2 13999 7.644 0.983 0.982 0.942 0.982 0.973 0.973 0.937 0.872 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
58. K01G5.4 ran-1 32379 7.642 0.948 0.956 0.924 0.956 0.964 0.986 0.969 0.939 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
59. ZC410.2 mppb-1 3991 7.641 0.954 0.959 0.945 0.959 0.978 0.958 0.972 0.916 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
60. B0205.11 mrpl-9 9162 7.64 0.964 0.947 0.968 0.947 0.972 0.966 0.938 0.938 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
61. Y41D4B.19 npp-8 12992 7.638 0.925 0.972 0.943 0.972 0.977 0.980 0.977 0.892 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
62. H21P03.1 mbf-1 25586 7.638 0.968 0.968 0.968 0.968 0.944 0.947 0.922 0.953 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
63. C15H11.9 rrbs-1 9177 7.638 0.947 0.947 0.979 0.947 0.984 0.959 0.973 0.902 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
64. M88.5 zbp-1 11851 7.638 0.947 0.973 0.976 0.973 0.965 0.937 0.944 0.923 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
65. K07A12.7 mrps-15 6325 7.638 0.949 0.962 0.972 0.962 0.964 0.969 0.954 0.906 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
66. F01F1.8 cct-6 29460 7.638 0.966 0.975 0.962 0.975 0.956 0.956 0.952 0.896 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
67. C26E6.4 rpb-2 7053 7.637 0.936 0.964 0.938 0.964 0.964 0.988 0.949 0.934 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
68. B0261.4 mrpl-47 8210 7.635 0.955 0.956 0.957 0.956 0.965 0.977 0.966 0.903 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
69. Y17G7A.1 hmg-12 29989 7.635 0.971 0.952 0.950 0.952 0.972 0.972 0.928 0.938 HMG [Source:RefSeq peptide;Acc:NP_496544]
70. F56F3.1 ifet-1 25772 7.635 0.970 0.956 0.950 0.956 0.972 0.971 0.954 0.906 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
71. T19B4.2 npp-7 13073 7.635 0.964 0.941 0.925 0.941 0.969 0.983 0.983 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
72. T12E12.2 cec-6 4758 7.633 0.940 0.949 0.953 0.949 0.979 0.974 0.973 0.916 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
73. B0511.8 mrps-30 5050 7.631 0.953 0.941 0.945 0.941 0.974 0.978 0.973 0.926 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
74. D2023.5 mpst-1 10328 7.631 0.958 0.957 0.971 0.957 0.982 0.956 0.970 0.880 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
75. F53G2.7 mnat-1 10966 7.63 0.923 0.972 0.983 0.972 0.976 0.966 0.898 0.940 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
76. Y40B1B.5 eif-3.J 15061 7.63 0.972 0.962 0.980 0.962 0.935 0.967 0.920 0.932 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
77. R07E5.14 rnp-4 11659 7.629 0.950 0.942 0.924 0.942 0.991 0.969 0.964 0.947 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
78. C06A1.5 rpb-6 7515 7.629 0.961 0.958 0.971 0.958 0.988 0.968 0.975 0.850 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
79. R74.1 lars-1 8467 7.625 0.940 0.949 0.974 0.949 0.985 0.939 0.954 0.935 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
80. R09B3.5 mag-1 7496 7.624 0.949 0.955 0.952 0.955 0.981 0.985 0.942 0.905 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
81. ZK616.6 perm-3 16186 7.624 0.962 0.956 0.972 0.956 0.937 0.980 0.922 0.939 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
82. F17C11.9 eef-1G 37911 7.624 0.961 0.955 0.960 0.955 0.968 0.946 0.951 0.928 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
83. F56D2.6 ddx-15 12282 7.623 0.933 0.965 0.942 0.965 0.973 0.981 0.926 0.938 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
84. C01F6.8 icln-1 6586 7.622 0.950 0.941 0.945 0.941 0.984 0.987 0.971 0.903 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
85. Y18D10A.19 fkb-2 48128 7.622 0.953 0.967 0.957 0.967 0.947 0.945 0.935 0.951 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
86. Y37E3.9 phb-1 29211 7.621 0.950 0.956 0.966 0.956 0.954 0.958 0.947 0.934 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
87. C26D10.2 hel-1 28697 7.62 0.963 0.965 0.971 0.965 0.920 0.962 0.920 0.954 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
88. C27H5.3 fust-1 6978 7.619 0.974 0.941 0.965 0.941 0.951 0.982 0.930 0.935 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
89. F42A6.7 hrp-1 28201 7.618 0.965 0.950 0.941 0.950 0.965 0.967 0.957 0.923 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
90. H20J04.5 pfd-2 8082 7.617 0.961 0.945 0.975 0.945 0.965 0.975 0.957 0.894 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
91. T05H4.6 erfa-1 12542 7.617 0.974 0.951 0.970 0.951 0.934 0.965 0.923 0.949 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
92. Y55F3AR.3 cct-8 17979 7.616 0.959 0.961 0.978 0.961 0.928 0.972 0.936 0.921 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
93. F59A2.1 npp-9 34375 7.614 0.953 0.940 0.919 0.940 0.978 0.976 0.977 0.931 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
94. F59A2.3 cri-3 15077 7.614 0.945 0.940 0.954 0.940 0.955 0.983 0.948 0.949 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
95. Y43F8C.8 mrps-28 4036 7.613 0.942 0.943 0.943 0.943 0.974 0.984 0.959 0.925 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
96. T19A6.2 ngp-1 5884 7.612 0.947 0.963 0.930 0.963 0.967 0.966 0.960 0.916 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
97. C25A1.10 dao-5 18351 7.612 0.904 0.968 0.959 0.968 0.975 0.968 0.962 0.908 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
98. W01G7.3 rpb-11 7826 7.612 0.929 0.963 0.911 0.963 0.954 0.980 0.949 0.963 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
99. B0464.7 baf-1 10161 7.612 0.950 0.955 0.935 0.955 0.969 0.968 0.949 0.931 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
100. PAR2.1 mtss-1 4055 7.61 0.967 0.933 0.941 0.933 0.977 0.961 0.973 0.925 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA