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Results for Y56A3A.17

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.17 npp-16 5391 Y56A3A.17a, Y56A3A.17b Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]

Genes with expression patterns similar to Y56A3A.17

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.17 npp-16 5391 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
2. T05H4.14 gad-1 7979 7.796 0.982 0.983 0.973 0.983 0.978 0.973 0.965 0.959 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
3. Y38A8.3 ulp-2 7403 7.777 0.963 0.975 0.968 0.975 0.981 0.983 0.964 0.968 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
4. R12C12.2 ran-5 14517 7.765 0.985 0.971 0.970 0.971 0.958 0.968 0.960 0.982 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
5. Y46G5A.4 snrp-200 13827 7.764 0.930 0.972 0.976 0.972 0.993 0.994 0.965 0.962 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
6. F32E10.6 cec-5 10643 7.764 0.984 0.951 0.980 0.951 0.974 0.989 0.970 0.965 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
7. F52C9.7 mog-3 9880 7.763 0.984 0.973 0.981 0.973 0.978 0.985 0.970 0.919 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
8. F23F1.1 nfyc-1 9983 7.758 0.975 0.970 0.972 0.970 0.980 0.979 0.941 0.971 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
9. Y65B4BL.2 deps-1 18277 7.753 0.960 0.968 0.967 0.968 0.978 0.982 0.950 0.980
10. C27B7.1 spr-2 14958 7.745 0.974 0.977 0.977 0.977 0.966 0.960 0.947 0.967 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
11. K01G5.4 ran-1 32379 7.744 0.993 0.970 0.946 0.970 0.975 0.984 0.942 0.964 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
12. Y17G7A.1 hmg-12 29989 7.743 0.975 0.970 0.950 0.970 0.965 0.981 0.955 0.977 HMG [Source:RefSeq peptide;Acc:NP_496544]
13. Y54H5A.3 tag-262 4269 7.736 0.978 0.960 0.969 0.960 0.961 0.958 0.971 0.979
14. C02B10.5 C02B10.5 9171 7.725 0.983 0.953 0.983 0.953 0.959 0.973 0.957 0.964
15. C52E4.6 cyl-1 6405 7.724 0.969 0.979 0.953 0.979 0.967 0.966 0.941 0.970 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
16. D1081.8 cdc-5L 8553 7.723 0.971 0.981 0.979 0.981 0.955 0.973 0.906 0.977 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
17. C28H8.9 dpff-1 8684 7.719 0.967 0.976 0.978 0.976 0.965 0.963 0.920 0.974 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
18. T23H2.1 npp-12 12425 7.719 0.960 0.952 0.969 0.952 0.962 0.978 0.968 0.978 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
19. Y54E5A.4 npp-4 6288 7.718 0.965 0.960 0.983 0.960 0.984 0.971 0.940 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
20. C33H5.12 rsp-6 23342 7.716 0.986 0.963 0.975 0.963 0.962 0.956 0.966 0.945 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
21. F18C5.2 wrn-1 3792 7.713 0.915 0.975 0.965 0.975 0.971 0.987 0.965 0.960 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
22. B0035.3 B0035.3 4118 7.713 0.979 0.960 0.973 0.960 0.959 0.957 0.975 0.950
23. T28D9.2 rsp-5 6460 7.712 0.978 0.949 0.976 0.949 0.958 0.968 0.959 0.975 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
24. F56C9.6 F56C9.6 4303 7.709 0.979 0.966 0.963 0.966 0.913 0.976 0.964 0.982
25. Y53C12B.3 nos-3 20231 7.705 0.952 0.975 0.978 0.975 0.958 0.977 0.948 0.942 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
26. W02B12.3 rsp-1 9235 7.703 0.981 0.947 0.970 0.947 0.962 0.984 0.945 0.967 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
27. T23B5.1 prmt-3 10677 7.701 0.976 0.964 0.984 0.964 0.974 0.964 0.972 0.903 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
28. C25D7.8 otub-1 7941 7.701 0.970 0.969 0.969 0.969 0.974 0.931 0.964 0.955 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
29. F41H10.4 F41H10.4 3295 7.701 0.974 0.975 0.953 0.975 0.971 0.951 0.931 0.971
30. F32H2.1 snpc-4 7581 7.699 0.964 0.972 0.967 0.972 0.964 0.981 0.964 0.915 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
31. F59A2.1 npp-9 34375 7.698 0.984 0.971 0.950 0.971 0.972 0.964 0.908 0.978 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
32. T26A5.5 jhdm-1 12698 7.698 0.938 0.969 0.981 0.969 0.986 0.988 0.977 0.890 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
33. F42A6.7 hrp-1 28201 7.698 0.987 0.965 0.973 0.965 0.968 0.969 0.960 0.911 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
34. C05C8.6 hpo-9 8263 7.698 0.963 0.970 0.960 0.970 0.960 0.960 0.931 0.984
35. F36A2.1 cids-2 4551 7.695 0.967 0.970 0.936 0.970 0.966 0.971 0.939 0.976 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
36. F55G1.8 plk-3 12036 7.694 0.958 0.972 0.978 0.972 0.975 0.971 0.925 0.943 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
37. C08B11.5 sap-49 10553 7.694 0.977 0.957 0.954 0.957 0.983 0.966 0.954 0.946 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
38. Y34D9A.1 mrpl-38 5291 7.692 0.968 0.963 0.947 0.963 0.962 0.977 0.964 0.948 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
39. F10G7.3 unc-85 5206 7.692 0.959 0.976 0.963 0.976 0.938 0.977 0.960 0.943 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
40. E01A2.4 let-504 9788 7.69 0.952 0.984 0.917 0.984 0.990 0.967 0.951 0.945
41. R53.2 dtmk-1 6821 7.688 0.969 0.963 0.951 0.963 0.962 0.956 0.982 0.942 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
42. ZK686.4 snu-23 9040 7.687 0.974 0.966 0.969 0.966 0.958 0.968 0.966 0.920 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
43. F56D2.6 ddx-15 12282 7.687 0.934 0.958 0.977 0.958 0.967 0.986 0.964 0.943 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
44. ZK507.6 cya-1 6807 7.686 0.965 0.973 0.973 0.973 0.912 0.981 0.930 0.979 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
45. F43G9.9 cpn-1 14505 7.685 0.980 0.965 0.974 0.965 0.924 0.970 0.951 0.956 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
46. Y71G12B.9 lin-65 7476 7.682 0.963 0.968 0.960 0.968 0.975 0.991 0.924 0.933 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
47. W02D9.1 pri-2 6048 7.682 0.971 0.972 0.952 0.972 0.978 0.978 0.950 0.909 DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
48. F28B3.7 him-1 18274 7.681 0.950 0.969 0.974 0.969 0.981 0.969 0.929 0.940 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
49. F10E9.8 sas-4 3703 7.679 0.948 0.961 0.942 0.961 0.964 0.983 0.946 0.974 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
50. Y43F4B.4 npp-18 4780 7.678 0.959 0.972 0.980 0.972 0.972 0.926 0.947 0.950 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
51. Y74C9A.4 rcor-1 4686 7.675 0.974 0.947 0.964 0.947 0.950 0.948 0.959 0.986 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
52. Y37D8A.9 mrg-1 14369 7.673 0.982 0.968 0.978 0.968 0.958 0.975 0.905 0.939 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
53. Y39G10AR.7 ekl-7 7072 7.673 0.933 0.958 0.964 0.958 0.975 0.984 0.925 0.976
54. C18G1.5 hil-4 21692 7.673 0.977 0.954 0.954 0.954 0.975 0.981 0.960 0.918 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
55. F32H2.4 thoc-3 3861 7.672 0.947 0.962 0.969 0.962 0.972 0.954 0.939 0.967 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
56. F38B7.5 duo-1 3087 7.671 0.929 0.956 0.956 0.956 0.960 0.988 0.952 0.974 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
57. F31E3.3 rfc-4 3828 7.671 0.957 0.962 0.953 0.962 0.957 0.973 0.953 0.954 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
58. Y17G7B.5 mcm-2 6246 7.668 0.961 0.953 0.971 0.953 0.952 0.983 0.942 0.953 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
59. Y116A8C.42 snr-1 17062 7.667 0.943 0.957 0.967 0.957 0.954 0.982 0.924 0.983 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
60. R119.4 pqn-59 16065 7.666 0.950 0.964 0.982 0.964 0.941 0.964 0.933 0.968 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
61. ZK328.2 eftu-2 7040 7.665 0.928 0.963 0.940 0.963 0.962 0.986 0.982 0.941 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
62. F37E3.1 ncbp-1 5649 7.665 0.979 0.953 0.976 0.953 0.946 0.973 0.936 0.949 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
63. T16G1.11 eif-3.K 14014 7.664 0.965 0.957 0.938 0.957 0.979 0.961 0.963 0.944 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
64. C48B4.11 C48B4.11 4384 7.664 0.953 0.969 0.952 0.969 0.970 0.977 0.954 0.920
65. T04A8.14 emb-5 11746 7.661 0.969 0.966 0.980 0.966 0.961 0.941 0.923 0.955 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
66. F30F8.3 gras-1 5902 7.661 0.949 0.961 0.944 0.961 0.952 0.959 0.963 0.972 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
67. Y41D4B.19 npp-8 12992 7.66 0.979 0.960 0.979 0.960 0.957 0.958 0.944 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
68. F22D6.3 nars-1 18624 7.658 0.967 0.967 0.939 0.967 0.977 0.971 0.914 0.956 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
69. Y37A1B.1 lst-3 10739 7.658 0.907 0.980 0.961 0.980 0.957 0.964 0.963 0.946 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
70. H20J04.2 athp-2 5149 7.657 0.954 0.968 0.963 0.968 0.945 0.961 0.944 0.954 AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_494767]
71. F46B6.3 smg-4 4959 7.656 0.964 0.964 0.950 0.964 0.952 0.962 0.942 0.958 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
72. W02F12.6 sna-1 7338 7.655 0.975 0.967 0.942 0.967 0.982 0.977 0.940 0.905 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
73. K02F3.11 rnp-5 6205 7.655 0.978 0.939 0.963 0.939 0.962 0.979 0.928 0.967 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
74. C36B1.8 gls-1 8617 7.655 0.965 0.976 0.972 0.976 0.951 0.943 0.931 0.941 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
75. Y56A3A.29 ung-1 1900 7.654 0.952 0.950 0.946 0.950 0.966 0.974 0.964 0.952 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
76. B0464.9 B0464.9 2997 7.654 0.964 0.961 0.921 0.961 0.953 0.980 0.951 0.963 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
77. Y54E2A.3 tac-1 6308 7.654 0.966 0.963 0.941 0.963 0.985 0.960 0.917 0.959 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
78. T10F2.4 prp-19 11298 7.653 0.972 0.959 0.962 0.959 0.973 0.962 0.942 0.924 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
79. W03G1.6 pig-1 5015 7.653 0.957 0.937 0.959 0.937 0.968 0.992 0.932 0.971 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
80. ZK1251.9 dcaf-1 10926 7.652 0.969 0.962 0.970 0.962 0.968 0.949 0.933 0.939 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
81. ZK381.1 him-3 4913 7.652 0.957 0.950 0.964 0.950 0.962 0.975 0.921 0.973 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
82. Y37E3.15 npp-13 7250 7.651 0.979 0.947 0.957 0.947 0.958 0.974 0.953 0.936 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
83. T09A5.8 cec-3 5813 7.651 0.951 0.964 0.925 0.964 0.974 0.974 0.952 0.947 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
84. F08B4.5 pole-2 8234 7.65 0.954 0.966 0.971 0.966 0.975 0.950 0.913 0.955 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
85. C26E6.4 rpb-2 7053 7.65 0.941 0.965 0.949 0.965 0.968 0.980 0.951 0.931 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
86. B0464.2 ctr-9 7610 7.65 0.901 0.957 0.964 0.957 0.957 0.990 0.967 0.957 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
87. Y37D8A.11 cec-7 8801 7.649 0.947 0.962 0.974 0.962 0.977 0.970 0.910 0.947 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
88. T13F2.7 sna-2 4771 7.648 0.904 0.980 0.966 0.980 0.965 0.969 0.920 0.964 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
89. K12D12.2 npp-3 6914 7.645 0.932 0.962 0.965 0.962 0.959 0.988 0.927 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
90. K02F2.4 ulp-5 3433 7.644 0.923 0.942 0.965 0.942 0.937 0.982 0.971 0.982 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
91. Y113G7B.5 fog-2 2753 7.644 0.964 0.977 0.966 0.977 0.954 0.934 0.919 0.953 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
92. F28H1.3 aars-2 13537 7.644 0.977 0.947 0.963 0.947 0.968 0.947 0.936 0.959 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
93. Y18D10A.16 Y18D10A.16 2881 7.644 0.962 0.943 0.972 0.943 0.936 0.971 0.952 0.965
94. C13G5.2 C13G5.2 3532 7.644 0.957 0.969 0.961 0.969 0.909 0.976 0.957 0.946
95. D2030.6 prg-1 26751 7.643 0.915 0.927 0.990 0.927 0.977 0.986 0.950 0.971 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
96. C24G6.1 syp-2 2843 7.642 0.946 0.954 0.948 0.954 0.982 0.962 0.946 0.950
97. C17E4.10 C17E4.10 7034 7.642 0.975 0.957 0.977 0.957 0.942 0.975 0.955 0.904
98. K06A5.7 cdc-25.1 14961 7.641 0.938 0.944 0.954 0.944 0.975 0.972 0.980 0.934 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
99. C39E9.13 rfc-3 9443 7.641 0.975 0.972 0.962 0.972 0.964 0.963 0.927 0.906 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
100. T25G3.3 T25G3.3 7285 7.64 0.979 0.970 0.936 0.970 0.950 0.952 0.918 0.965

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA