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Results for F58E10.3

Gene ID Gene Name Reads Transcripts Annotation
F58E10.3 ddx-17 15107 F58E10.3a.1, F58E10.3a.2, F58E10.3a.3, F58E10.3a.4, F58E10.3a.5, F58E10.3b DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]

Genes with expression patterns similar to F58E10.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F58E10.3 ddx-17 15107 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
2. F28H1.3 aars-2 13537 7.79 0.980 0.972 0.985 0.972 0.982 0.967 0.948 0.984 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
3. K08F4.2 gtbp-1 25222 7.784 0.961 0.984 0.973 0.984 0.976 0.972 0.951 0.983 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
4. T28D9.2 rsp-5 6460 7.77 0.985 0.982 0.983 0.982 0.957 0.959 0.948 0.974 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
5. T23H2.1 npp-12 12425 7.768 0.972 0.968 0.983 0.968 0.977 0.980 0.949 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
6. ZK742.1 xpo-1 20741 7.766 0.966 0.965 0.982 0.965 0.976 0.979 0.960 0.973 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
7. K01G5.4 ran-1 32379 7.765 0.983 0.969 0.961 0.969 0.985 0.963 0.954 0.981 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
8. C33H5.12 rsp-6 23342 7.762 0.982 0.975 0.983 0.975 0.979 0.967 0.921 0.980 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
9. F58D5.1 hrp-2 17211 7.754 0.969 0.977 0.974 0.977 0.974 0.955 0.951 0.977 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
10. Y116A8C.42 snr-1 17062 7.753 0.949 0.982 0.968 0.982 0.960 0.963 0.968 0.981 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
11. ZK863.6 dpy-30 16177 7.752 0.973 0.976 0.972 0.976 0.966 0.954 0.962 0.973 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
12. F59A2.1 npp-9 34375 7.751 0.988 0.962 0.965 0.962 0.962 0.974 0.958 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
13. F32H2.1 snpc-4 7581 7.746 0.964 0.966 0.960 0.966 0.983 0.978 0.958 0.971 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
14. Y23H5B.6 Y23H5B.6 5886 7.744 0.954 0.990 0.969 0.990 0.965 0.956 0.949 0.971
15. T10B5.5 cct-7 24616 7.743 0.956 0.976 0.958 0.976 0.974 0.971 0.970 0.962 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
16. F56D2.6 ddx-15 12282 7.742 0.943 0.989 0.979 0.989 0.979 0.968 0.911 0.984 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
17. Y54E5A.4 npp-4 6288 7.74 0.972 0.970 0.982 0.970 0.979 0.932 0.947 0.988 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
18. Y71G12B.9 lin-65 7476 7.738 0.968 0.983 0.975 0.983 0.957 0.967 0.944 0.961 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
19. Y37D8A.9 mrg-1 14369 7.733 0.980 0.976 0.960 0.976 0.946 0.973 0.946 0.976 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
20. R07E5.14 rnp-4 11659 7.732 0.978 0.965 0.966 0.965 0.947 0.971 0.956 0.984 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
21. F32A5.7 lsm-4 3785 7.73 0.980 0.964 0.972 0.964 0.976 0.966 0.949 0.959 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
22. C26E6.4 rpb-2 7053 7.728 0.952 0.978 0.957 0.978 0.981 0.973 0.932 0.977 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
23. T28D9.10 snr-3 9995 7.727 0.954 0.978 0.935 0.978 0.964 0.972 0.955 0.991 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
24. Y53C12B.3 nos-3 20231 7.726 0.958 0.980 0.974 0.980 0.951 0.946 0.961 0.976 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
25. K08E7.1 eak-7 18960 7.725 0.971 0.960 0.975 0.960 0.967 0.960 0.963 0.969 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
26. Y37D8A.11 cec-7 8801 7.724 0.952 0.982 0.977 0.982 0.970 0.950 0.948 0.963 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
27. T19B4.2 npp-7 13073 7.724 0.966 0.967 0.970 0.967 0.971 0.952 0.956 0.975 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
28. F53F10.5 npp-11 3378 7.723 0.974 0.971 0.980 0.971 0.962 0.967 0.927 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
29. Y41D4B.19 npp-8 12992 7.72 0.973 0.976 0.988 0.976 0.931 0.970 0.963 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
30. W01G7.3 rpb-11 7826 7.72 0.954 0.978 0.975 0.978 0.964 0.949 0.947 0.975 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
31. F42A6.7 hrp-1 28201 7.719 0.980 0.965 0.984 0.965 0.964 0.949 0.945 0.967 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
32. K11D12.2 pqn-51 15951 7.717 0.971 0.979 0.983 0.979 0.964 0.948 0.936 0.957 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
33. Y37E3.15 npp-13 7250 7.716 0.981 0.962 0.971 0.962 0.959 0.944 0.947 0.990 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
34. Y17G7A.1 hmg-12 29989 7.711 0.980 0.981 0.976 0.981 0.963 0.948 0.914 0.968 HMG [Source:RefSeq peptide;Acc:NP_496544]
35. Y46G5A.4 snrp-200 13827 7.71 0.941 0.974 0.977 0.974 0.973 0.959 0.921 0.991 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
36. F23F1.1 nfyc-1 9983 7.71 0.981 0.964 0.979 0.964 0.956 0.957 0.926 0.983 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
37. T21B10.1 mrpl-50 14595 7.709 0.970 0.984 0.969 0.984 0.931 0.989 0.942 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
38. ZK1128.6 ttll-4 6059 7.709 0.952 0.989 0.976 0.989 0.941 0.968 0.930 0.964 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
39. T01E8.6 mrps-14 9328 7.707 0.947 0.982 0.955 0.982 0.953 0.968 0.956 0.964 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
40. C27H5.3 fust-1 6978 7.704 0.962 0.957 0.947 0.957 0.982 0.974 0.948 0.977 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
41. ZK1010.3 frg-1 3533 7.704 0.975 0.959 0.984 0.959 0.965 0.945 0.943 0.974 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
42. C06A1.5 rpb-6 7515 7.701 0.970 0.971 0.969 0.971 0.963 0.974 0.951 0.932 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
43. C48B4.11 C48B4.11 4384 7.699 0.967 0.979 0.966 0.979 0.979 0.933 0.932 0.964
44. C34E10.2 gop-2 5684 7.698 0.974 0.978 0.979 0.978 0.956 0.947 0.954 0.932 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
45. R12C12.2 ran-5 14517 7.697 0.983 0.953 0.972 0.953 0.962 0.952 0.952 0.970 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
46. Y14H12B.2 Y14H12B.2 6496 7.697 0.992 0.980 0.982 0.980 0.923 0.950 0.935 0.955
47. C08B11.5 sap-49 10553 7.695 0.982 0.975 0.965 0.975 0.968 0.955 0.920 0.955 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
48. Y38A8.3 ulp-2 7403 7.695 0.970 0.968 0.979 0.968 0.974 0.963 0.913 0.960 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
49. F21C3.4 rde-2 6286 7.692 0.939 0.978 0.979 0.978 0.946 0.976 0.943 0.953
50. T11G6.1 hars-1 7908 7.69 0.966 0.981 0.965 0.981 0.968 0.959 0.923 0.947 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
51. ZK1251.9 dcaf-1 10926 7.69 0.963 0.972 0.969 0.972 0.955 0.977 0.946 0.936 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
52. ZK1058.4 ccdc-47 8879 7.688 0.975 0.977 0.960 0.977 0.967 0.963 0.911 0.958 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
53. B0205.11 mrpl-9 9162 7.687 0.927 0.967 0.973 0.967 0.965 0.950 0.966 0.972 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
54. Y34D9A.1 mrpl-38 5291 7.687 0.975 0.970 0.970 0.970 0.962 0.957 0.914 0.969 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
55. F22D6.3 nars-1 18624 7.686 0.968 0.986 0.974 0.986 0.964 0.963 0.865 0.980 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
56. Y73B6BL.32 lsm-8 11002 7.686 0.941 0.978 0.975 0.978 0.964 0.943 0.952 0.955 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
57. K07A1.12 lin-53 15817 7.683 0.975 0.966 0.974 0.966 0.942 0.964 0.939 0.957 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
58. T08B2.9 fars-1 12650 7.683 0.957 0.984 0.967 0.984 0.958 0.944 0.929 0.960 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
59. T25G3.4 T25G3.4 9394 7.683 0.950 0.970 0.964 0.970 0.962 0.968 0.946 0.953 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
60. C34E10.5 prmt-5 12277 7.681 0.943 0.992 0.981 0.992 0.955 0.961 0.910 0.947 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
61. T16G1.11 eif-3.K 14014 7.681 0.964 0.967 0.966 0.967 0.971 0.951 0.921 0.974 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
62. C27B7.1 spr-2 14958 7.679 0.976 0.968 0.980 0.968 0.981 0.934 0.893 0.979 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
63. T12E12.2 cec-6 4758 7.679 0.919 0.985 0.979 0.985 0.971 0.945 0.945 0.950 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
64. Y71F9B.4 snr-7 13542 7.679 0.938 0.972 0.947 0.972 0.946 0.986 0.967 0.951 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
65. Y39G10AR.7 ekl-7 7072 7.677 0.955 0.955 0.968 0.955 0.972 0.950 0.935 0.987
66. F56F3.1 ifet-1 25772 7.677 0.941 0.977 0.971 0.977 0.944 0.953 0.945 0.969 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
67. W08E3.3 ola-1 20885 7.676 0.956 0.960 0.953 0.960 0.979 0.946 0.964 0.958 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
68. C02B10.5 C02B10.5 9171 7.676 0.977 0.939 0.971 0.939 0.959 0.970 0.932 0.989
69. F58B3.5 mars-1 6729 7.675 0.960 0.965 0.951 0.965 0.960 0.962 0.942 0.970 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
70. F01F1.8 cct-6 29460 7.673 0.971 0.981 0.970 0.981 0.940 0.972 0.929 0.929 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
71. K01G5.2 hpl-2 6781 7.673 0.962 0.973 0.975 0.973 0.957 0.963 0.902 0.968 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
72. C26E6.7 eri-9 8069 7.673 0.980 0.964 0.957 0.964 0.925 0.967 0.967 0.949 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
73. T06A10.4 lsy-13 7631 7.673 0.939 0.970 0.970 0.970 0.961 0.963 0.944 0.956
74. C26D10.1 ran-3 11111 7.672 0.952 0.982 0.971 0.982 0.933 0.967 0.954 0.931 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
75. W02B12.3 rsp-1 9235 7.671 0.979 0.959 0.985 0.959 0.982 0.962 0.868 0.977 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
76. F22B5.9 fars-3 7209 7.671 0.941 0.967 0.944 0.967 0.971 0.966 0.949 0.966 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
77. T21B10.7 cct-2 13999 7.67 0.976 0.966 0.969 0.966 0.952 0.985 0.933 0.923 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
78. F13G3.4 dylt-1 21345 7.667 0.950 0.982 0.982 0.982 0.962 0.924 0.913 0.972 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
79. F10E9.7 F10E9.7 1842 7.667 0.969 0.953 0.974 0.953 0.965 0.947 0.948 0.958
80. R74.8 R74.8 7722 7.667 0.971 0.974 0.977 0.974 0.923 0.966 0.940 0.942
81. F59E12.11 sam-4 8179 7.667 0.951 0.938 0.985 0.938 0.953 0.963 0.956 0.983
82. F09G2.9 attf-2 14771 7.666 0.974 0.977 0.975 0.977 0.938 0.967 0.921 0.937 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
83. Y111B2A.18 rsp-3 43731 7.665 0.982 0.957 0.968 0.957 0.963 0.942 0.919 0.977 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
84. B0035.3 B0035.3 4118 7.665 0.989 0.948 0.975 0.948 0.969 0.949 0.918 0.969
85. F36A2.1 cids-2 4551 7.665 0.972 0.974 0.965 0.974 0.957 0.933 0.932 0.958 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
86. K08F11.3 cif-1 10218 7.665 0.959 0.982 0.946 0.982 0.973 0.944 0.915 0.964 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
87. F28B3.8 imb-1 7515 7.663 0.951 0.974 0.961 0.974 0.962 0.937 0.947 0.957 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
88. H20J04.2 athp-2 5149 7.663 0.960 0.966 0.949 0.966 0.965 0.973 0.914 0.970 AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_494767]
89. T02G5.9 kars-1 9763 7.662 0.926 0.983 0.937 0.983 0.970 0.958 0.931 0.974 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
90. C25A1.4 C25A1.4 15507 7.662 0.965 0.980 0.969 0.980 0.959 0.935 0.960 0.914
91. W06H3.3 ctps-1 8363 7.661 0.932 0.964 0.967 0.964 0.943 0.973 0.956 0.962 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
92. T12G3.5 mrpl-51 5192 7.661 0.960 0.953 0.961 0.953 0.930 0.967 0.959 0.978 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
93. C25D7.8 otub-1 7941 7.66 0.970 0.965 0.983 0.965 0.969 0.917 0.923 0.968 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
94. R53.2 dtmk-1 6821 7.659 0.962 0.968 0.966 0.968 0.987 0.968 0.908 0.932 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
95. ZC410.2 mppb-1 3991 7.659 0.963 0.965 0.918 0.965 0.942 0.978 0.961 0.967 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
96. Y62E10A.11 mdt-9 5971 7.659 0.953 0.967 0.973 0.967 0.941 0.972 0.962 0.924 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
97. B0303.15 mrpl-11 9889 7.657 0.923 0.939 0.983 0.939 0.972 0.975 0.962 0.964 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
98. T19C3.8 fem-2 9225 7.657 0.968 0.959 0.976 0.959 0.960 0.953 0.951 0.931 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
99. Y55F3AM.12 dcap-1 8679 7.657 0.957 0.976 0.980 0.976 0.938 0.967 0.922 0.941 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
100. C26D10.2 hel-1 28697 7.657 0.946 0.977 0.963 0.977 0.969 0.939 0.901 0.985 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA