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Results for R06A4.9

Gene ID Gene Name Reads Transcripts Annotation
R06A4.9 pfs-2 4733 R06A4.9a, R06A4.9b Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]

Genes with expression patterns similar to R06A4.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R06A4.9 pfs-2 4733 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
2. C27B7.1 spr-2 14958 7.699 0.944 0.976 0.970 0.976 0.976 0.963 0.947 0.947 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
3. C02B10.5 C02B10.5 9171 7.699 0.949 0.959 0.978 0.959 0.995 0.967 0.932 0.960
4. W02B12.3 rsp-1 9235 7.693 0.971 0.965 0.972 0.965 0.958 0.969 0.945 0.948 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
5. T19B4.2 npp-7 13073 7.685 0.974 0.980 0.965 0.980 0.982 0.965 0.878 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
6. T04A8.14 emb-5 11746 7.681 0.931 0.982 0.971 0.982 0.968 0.956 0.962 0.929 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
7. R12C12.2 ran-5 14517 7.681 0.952 0.989 0.979 0.989 0.975 0.974 0.879 0.944 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
8. Y56A3A.20 ccf-1 18463 7.678 0.927 0.971 0.973 0.971 0.952 0.967 0.954 0.963 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
9. Y54E5A.4 npp-4 6288 7.677 0.956 0.973 0.972 0.973 0.981 0.955 0.912 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
10. Y17G7A.1 hmg-12 29989 7.675 0.968 0.964 0.966 0.964 0.983 0.959 0.924 0.947 HMG [Source:RefSeq peptide;Acc:NP_496544]
11. C28H8.9 dpff-1 8684 7.67 0.956 0.962 0.972 0.962 0.978 0.956 0.940 0.944 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
12. F56D2.6 ddx-15 12282 7.669 0.926 0.960 0.972 0.960 0.987 0.974 0.936 0.954 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
13. H19N07.1 erfa-3 19869 7.666 0.979 0.949 0.955 0.949 0.979 0.970 0.938 0.947 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
14. T23H2.1 npp-12 12425 7.664 0.963 0.961 0.969 0.961 0.985 0.980 0.902 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
15. C08B11.5 sap-49 10553 7.663 0.967 0.973 0.954 0.973 0.970 0.963 0.939 0.924 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
16. F59E12.11 sam-4 8179 7.663 0.960 0.984 0.968 0.984 0.935 0.976 0.896 0.960
17. K11D12.2 pqn-51 15951 7.658 0.954 0.981 0.979 0.981 0.976 0.956 0.903 0.928 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
18. F42A6.7 hrp-1 28201 7.656 0.976 0.961 0.971 0.961 0.972 0.958 0.930 0.927 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
19. F22D6.3 nars-1 18624 7.656 0.964 0.961 0.920 0.961 0.977 0.981 0.930 0.962 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
20. F33D4.5 mrpl-1 5337 7.655 0.939 0.972 0.949 0.972 0.950 0.979 0.937 0.957 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
21. T17E9.2 nmt-1 8017 7.654 0.948 0.957 0.956 0.957 0.962 0.964 0.960 0.950 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
22. T10F2.4 prp-19 11298 7.651 0.958 0.954 0.954 0.954 0.972 0.946 0.959 0.954 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
23. ZK742.1 xpo-1 20741 7.65 0.925 0.967 0.982 0.967 0.973 0.985 0.892 0.959 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
24. F28H1.3 aars-2 13537 7.65 0.957 0.954 0.954 0.954 0.971 0.986 0.907 0.967 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
25. B0035.3 B0035.3 4118 7.649 0.936 0.953 0.981 0.953 0.982 0.977 0.899 0.968
26. F23F1.1 nfyc-1 9983 7.645 0.957 0.974 0.975 0.974 0.949 0.956 0.911 0.949 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
27. F43G9.9 cpn-1 14505 7.644 0.927 0.969 0.973 0.969 0.951 0.965 0.924 0.966 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
28. F52C9.7 mog-3 9880 7.643 0.934 0.968 0.960 0.968 0.966 0.955 0.935 0.957 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
29. F08F8.3 kap-1 31437 7.643 0.967 0.977 0.968 0.977 0.955 0.956 0.904 0.939 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
30. C26E6.4 rpb-2 7053 7.64 0.946 0.956 0.966 0.956 0.975 0.978 0.927 0.936 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
31. ZK1058.4 ccdc-47 8879 7.639 0.956 0.954 0.942 0.954 0.974 0.982 0.935 0.942 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
32. R05D11.3 ran-4 15494 7.638 0.956 0.960 0.959 0.960 0.966 0.960 0.935 0.942 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
33. ZK507.6 cya-1 6807 7.635 0.910 0.984 0.971 0.984 0.960 0.964 0.944 0.918 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
34. Y38A8.3 ulp-2 7403 7.633 0.947 0.956 0.966 0.956 0.987 0.962 0.928 0.931 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
35. C52E4.6 cyl-1 6405 7.633 0.966 0.968 0.936 0.968 0.968 0.960 0.936 0.931 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
36. T16G1.11 eif-3.K 14014 7.631 0.964 0.943 0.937 0.943 0.989 0.980 0.943 0.932 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
37. C18A3.5 tiar-1 25400 7.63 0.966 0.964 0.970 0.964 0.944 0.967 0.929 0.926 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
38. F36A2.1 cids-2 4551 7.628 0.946 0.961 0.941 0.961 0.984 0.963 0.916 0.956 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
39. Y65B4BL.2 deps-1 18277 7.627 0.917 0.964 0.976 0.964 0.975 0.950 0.949 0.932
40. Y46G5A.4 snrp-200 13827 7.627 0.898 0.963 0.971 0.963 0.975 0.966 0.938 0.953 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
41. Y54E2A.3 tac-1 6308 7.625 0.917 0.963 0.966 0.963 0.971 0.960 0.923 0.962 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
42. Y102A5A.1 cand-1 11808 7.624 0.940 0.975 0.965 0.975 0.960 0.955 0.936 0.918 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
43. C25D7.8 otub-1 7941 7.623 0.960 0.969 0.948 0.969 0.970 0.944 0.900 0.963 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
44. ZK616.6 perm-3 16186 7.623 0.959 0.962 0.945 0.962 0.972 0.966 0.912 0.945 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
45. Y113G7B.23 swsn-1 13766 7.622 0.967 0.970 0.956 0.970 0.932 0.958 0.932 0.937 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
46. C36B1.3 rpb-3 4442 7.622 0.948 0.963 0.964 0.963 0.972 0.944 0.937 0.931 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
47. Y34D9A.1 mrpl-38 5291 7.622 0.940 0.958 0.953 0.958 0.965 0.971 0.937 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
48. F13G3.4 dylt-1 21345 7.621 0.952 0.951 0.960 0.951 0.973 0.959 0.928 0.947 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
49. R05D3.11 met-2 3364 7.619 0.950 0.977 0.963 0.977 0.953 0.953 0.910 0.936 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
50. K10C3.2 ensa-1 19836 7.615 0.943 0.971 0.972 0.971 0.946 0.932 0.918 0.962 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
51. C26D10.2 hel-1 28697 7.615 0.969 0.939 0.945 0.939 0.962 0.969 0.946 0.946 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
52. C50C3.6 prp-8 19582 7.614 0.968 0.942 0.947 0.942 0.965 0.941 0.950 0.959 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
53. Y43F4B.4 npp-18 4780 7.613 0.939 0.984 0.957 0.984 0.938 0.976 0.904 0.931 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
54. F32H2.1 snpc-4 7581 7.612 0.945 0.961 0.944 0.961 0.976 0.971 0.893 0.961 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
55. F32H2.4 thoc-3 3861 7.611 0.908 0.979 0.964 0.979 0.967 0.960 0.912 0.942 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
56. C18D11.4 rsp-8 18308 7.611 0.958 0.947 0.955 0.947 0.951 0.937 0.953 0.963 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
57. Y111B2A.18 rsp-3 43731 7.611 0.964 0.954 0.956 0.954 0.955 0.955 0.932 0.941 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
58. C05C8.6 hpo-9 8263 7.61 0.955 0.965 0.957 0.965 0.973 0.945 0.925 0.925
59. C08B6.7 wdr-20 7575 7.61 0.887 0.981 0.960 0.981 0.943 0.973 0.923 0.962 WD repeat-containing protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:D9N129]
60. F37E3.1 ncbp-1 5649 7.608 0.937 0.949 0.970 0.949 0.976 0.945 0.935 0.947 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
61. B0464.9 B0464.9 2997 7.606 0.928 0.977 0.935 0.977 0.949 0.967 0.953 0.920 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
62. Y37E3.15 npp-13 7250 7.605 0.962 0.956 0.928 0.956 0.971 0.969 0.909 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
63. C47D12.6 tars-1 23488 7.604 0.943 0.948 0.953 0.948 0.975 0.950 0.949 0.938 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
64. C33H5.12 rsp-6 23342 7.603 0.956 0.943 0.964 0.943 0.958 0.973 0.917 0.949 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
65. Y54H5A.3 tag-262 4269 7.6 0.945 0.972 0.954 0.972 0.956 0.971 0.915 0.915
66. F02E9.9 dpt-1 5401 7.6 0.941 0.955 0.937 0.955 0.949 0.936 0.972 0.955 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
67. F53F10.5 npp-11 3378 7.6 0.935 0.965 0.974 0.965 0.953 0.963 0.899 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
68. F46B6.3 smg-4 4959 7.599 0.964 0.951 0.945 0.951 0.944 0.955 0.917 0.972 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
69. C34E10.5 prmt-5 12277 7.599 0.948 0.944 0.958 0.944 0.983 0.961 0.946 0.915 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
70. Y67H2A.6 csn-6 3098 7.597 0.910 0.979 0.955 0.979 0.944 0.930 0.945 0.955 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
71. F49D11.1 prp-17 5338 7.594 0.942 0.946 0.965 0.946 0.944 0.976 0.927 0.948 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
72. K01G5.4 ran-1 32379 7.593 0.952 0.965 0.949 0.965 0.968 0.974 0.878 0.942 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
73. F32A5.7 lsm-4 3785 7.592 0.961 0.969 0.962 0.969 0.967 0.963 0.885 0.916 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
74. C36B1.5 prp-4 2714 7.591 0.912 0.975 0.976 0.975 0.961 0.918 0.924 0.950 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
75. Y39G10AR.9 Y39G10AR.9 3972 7.59 0.973 0.973 0.898 0.973 0.972 0.961 0.913 0.927
76. C10C5.6 daf-15 8724 7.589 0.887 0.975 0.962 0.975 0.971 0.967 0.926 0.926 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
77. F54C8.5 rheb-1 6358 7.589 0.919 0.952 0.975 0.952 0.932 0.960 0.922 0.977 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
78. T05H10.2 apn-1 5628 7.588 0.917 0.981 0.966 0.981 0.943 0.950 0.955 0.895 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
79. D1081.8 cdc-5L 8553 7.586 0.907 0.967 0.977 0.967 0.978 0.948 0.909 0.933 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
80. T24D1.4 tag-179 3757 7.585 0.931 0.970 0.950 0.970 0.959 0.951 0.932 0.922
81. D1022.1 ubc-6 9722 7.584 0.921 0.974 0.972 0.974 0.961 0.930 0.953 0.899 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
82. ZK686.4 snu-23 9040 7.583 0.944 0.966 0.965 0.966 0.972 0.957 0.867 0.946 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
83. H17B01.4 emc-1 9037 7.581 0.881 0.968 0.972 0.968 0.974 0.976 0.886 0.956 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
84. Y62E10A.11 mdt-9 5971 7.581 0.967 0.959 0.966 0.959 0.953 0.964 0.880 0.933 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
85. F58B6.3 par-2 3914 7.58 0.969 0.980 0.974 0.980 0.920 0.899 0.929 0.929
86. T27F2.1 skp-1 3532 7.58 0.918 0.959 0.959 0.959 0.972 0.959 0.903 0.951 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
87. T05H4.6 erfa-1 12542 7.58 0.944 0.942 0.926 0.942 0.977 0.962 0.946 0.941 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
88. C15H11.4 dhs-22 21674 7.58 0.952 0.959 0.958 0.959 0.962 0.940 0.909 0.941 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
89. Y39G10AR.7 ekl-7 7072 7.579 0.955 0.951 0.988 0.951 0.977 0.947 0.857 0.953
90. T04A8.10 sel-13 3109 7.579 0.912 0.958 0.969 0.958 0.976 0.951 0.945 0.910 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
91. F28B3.7 him-1 18274 7.579 0.925 0.957 0.970 0.957 0.949 0.958 0.935 0.928 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
92. F41H10.4 F41H10.4 3295 7.578 0.918 0.979 0.960 0.979 0.975 0.969 0.859 0.939
93. F25B5.2 nop-1 4127 7.578 0.932 0.961 0.968 0.961 0.971 0.926 0.941 0.918 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
94. T10B11.3 ztf-4 5161 7.577 0.930 0.972 0.979 0.972 0.975 0.963 0.853 0.933 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
95. Y54E10A.9 vbh-1 28746 7.576 0.954 0.967 0.949 0.967 0.933 0.923 0.951 0.932 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
96. C17E4.10 C17E4.10 7034 7.576 0.918 0.961 0.962 0.961 0.964 0.937 0.941 0.932
97. F10G8.3 rae-1 7542 7.576 0.962 0.951 0.951 0.951 0.965 0.933 0.957 0.906 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
98. T08B2.9 fars-1 12650 7.575 0.955 0.951 0.949 0.951 0.935 0.961 0.923 0.950 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
99. Y116A8C.35 uaf-2 13808 7.574 0.952 0.953 0.974 0.953 0.952 0.924 0.953 0.913 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
100. ZK858.1 gld-4 14162 7.573 0.929 0.969 0.960 0.969 0.958 0.926 0.939 0.923 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA