C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for M88.7

Gene ID Gene Name Reads Transcripts Annotation
M88.7 cisd-3.1 5713 M88.7 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]

Genes with expression patterns similar to M88.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M88.7 cisd-3.1 5713 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
2. Y71F9B.4 snr-7 13542 7.683 0.938 0.966 0.944 0.966 0.973 0.973 0.966 0.957 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
3. Y116A8C.42 snr-1 17062 7.655 0.935 0.967 0.962 0.967 0.953 0.950 0.960 0.961 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. T08B2.9 fars-1 12650 7.652 0.947 0.955 0.965 0.955 0.955 0.959 0.945 0.971 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
5. C08F8.1 pfd-1 10199 7.64 0.934 0.957 0.941 0.957 0.979 0.966 0.940 0.966 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
6. K08F4.2 gtbp-1 25222 7.636 0.914 0.947 0.974 0.947 0.973 0.973 0.951 0.957 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
7. T01E8.6 mrps-14 9328 7.633 0.963 0.951 0.957 0.951 0.938 0.958 0.958 0.957 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
8. T21B10.7 cct-2 13999 7.633 0.909 0.955 0.964 0.955 0.977 0.976 0.955 0.942 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
9. T10B5.5 cct-7 24616 7.63 0.903 0.954 0.956 0.954 0.949 0.962 0.967 0.985 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
10. T21B10.1 mrpl-50 14595 7.629 0.931 0.954 0.953 0.954 0.961 0.981 0.961 0.934 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
11. C49H3.10 xpo-3 9101 7.623 0.933 0.970 0.962 0.970 0.956 0.959 0.956 0.917 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
12. F21C3.4 rde-2 6286 7.619 0.939 0.939 0.940 0.939 0.976 0.978 0.936 0.972
13. F32H2.1 snpc-4 7581 7.619 0.944 0.963 0.947 0.963 0.933 0.970 0.970 0.929 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
14. F01F1.8 cct-6 29460 7.613 0.906 0.947 0.974 0.947 0.968 0.967 0.939 0.965 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
15. C26B2.6 elpc-4 3600 7.613 0.964 0.946 0.920 0.946 0.970 0.933 0.980 0.954 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
16. W06E11.4 sbds-1 6701 7.612 0.922 0.958 0.939 0.958 0.954 0.961 0.968 0.952 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
17. T28D9.2 rsp-5 6460 7.606 0.919 0.964 0.965 0.964 0.967 0.948 0.947 0.932 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
18. K01G5.1 rnf-113 4336 7.604 0.933 0.932 0.954 0.932 0.966 0.959 0.970 0.958 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
19. Y53C12B.3 nos-3 20231 7.602 0.926 0.962 0.952 0.962 0.953 0.942 0.961 0.944 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
20. R144.7 larp-1 24669 7.598 0.905 0.964 0.957 0.964 0.962 0.957 0.935 0.954 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
21. Y23H5B.6 Y23H5B.6 5886 7.597 0.940 0.962 0.935 0.962 0.945 0.960 0.949 0.944
22. Y54E5A.6 Y54E5A.6 770 7.597 0.928 0.922 0.962 0.922 0.975 0.968 0.966 0.954
23. B0261.4 mrpl-47 8210 7.595 0.929 0.954 0.927 0.954 0.935 0.977 0.954 0.965 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
24. R09B3.5 mag-1 7496 7.595 0.927 0.934 0.971 0.934 0.962 0.965 0.962 0.940 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
25. Y55F3AR.3 cct-8 17979 7.594 0.903 0.916 0.974 0.916 0.964 0.977 0.963 0.981 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
26. T28D9.10 snr-3 9995 7.592 0.926 0.966 0.934 0.966 0.960 0.965 0.946 0.929 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
27. F10G7.1 tag-151 9031 7.592 0.926 0.960 0.959 0.960 0.981 0.952 0.957 0.897 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
28. D2023.5 mpst-1 10328 7.591 0.929 0.971 0.954 0.971 0.955 0.943 0.936 0.932 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
29. C01F6.8 icln-1 6586 7.59 0.953 0.955 0.963 0.955 0.942 0.958 0.929 0.935 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
30. C06A1.5 rpb-6 7515 7.588 0.941 0.950 0.936 0.950 0.963 0.961 0.948 0.939 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
31. Y47D3A.26 smc-3 6256 7.587 0.917 0.952 0.952 0.952 0.977 0.942 0.955 0.940 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
32. C07G2.3 cct-5 44703 7.584 0.931 0.943 0.957 0.943 0.970 0.961 0.943 0.936 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
33. T16G1.11 eif-3.K 14014 7.583 0.927 0.961 0.962 0.961 0.934 0.952 0.932 0.954 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
34. C25D7.8 otub-1 7941 7.582 0.946 0.953 0.942 0.953 0.954 0.938 0.929 0.967 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
35. F58E10.3 ddx-17 15107 7.58 0.924 0.950 0.954 0.950 0.939 0.974 0.943 0.946 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
36. F22B5.9 fars-3 7209 7.579 0.906 0.950 0.946 0.950 0.934 0.972 0.954 0.967 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
37. ZK863.6 dpy-30 16177 7.578 0.878 0.960 0.948 0.960 0.949 0.941 0.960 0.982 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
38. C14A4.5 crn-5 1759 7.575 0.970 0.929 0.964 0.929 0.954 0.920 0.950 0.959 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
39. C34E10.11 mrps-26 4649 7.575 0.904 0.939 0.948 0.939 0.974 0.956 0.954 0.961 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
40. T04A8.11 mrpl-16 5998 7.573 0.942 0.972 0.958 0.972 0.918 0.947 0.920 0.944 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
41. F56F3.1 ifet-1 25772 7.573 0.919 0.957 0.946 0.957 0.955 0.943 0.945 0.951 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
42. R07E5.14 rnp-4 11659 7.572 0.914 0.936 0.953 0.936 0.957 0.956 0.963 0.957 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
43. Y46G5A.4 snrp-200 13827 7.57 0.923 0.956 0.957 0.956 0.971 0.958 0.913 0.936 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
44. W08E3.1 snr-2 14849 7.568 0.912 0.961 0.969 0.961 0.924 0.933 0.959 0.949 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
45. K11H3.6 mrpl-36 7328 7.566 0.934 0.926 0.953 0.926 0.976 0.970 0.973 0.908 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
46. K01G5.4 ran-1 32379 7.566 0.918 0.952 0.938 0.952 0.942 0.964 0.943 0.957 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
47. F09F7.3 rpc-2 9751 7.564 0.895 0.957 0.953 0.957 0.974 0.955 0.944 0.929 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
48. F54A3.3 cct-3 25183 7.564 0.918 0.957 0.942 0.957 0.932 0.971 0.941 0.946 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
49. T03D8.2 mrps-12 8253 7.564 0.919 0.948 0.911 0.948 0.978 0.960 0.951 0.949 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
50. F42A6.7 hrp-1 28201 7.563 0.905 0.948 0.966 0.948 0.933 0.963 0.948 0.952 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
51. F28H1.3 aars-2 13537 7.562 0.897 0.944 0.959 0.944 0.944 0.963 0.954 0.957 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
52. F53A2.4 nud-1 7818 7.561 0.935 0.944 0.956 0.944 0.960 0.950 0.947 0.925 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
53. W08E3.3 ola-1 20885 7.56 0.918 0.939 0.946 0.939 0.945 0.948 0.942 0.983 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
54. Y73B6BL.32 lsm-8 11002 7.558 0.937 0.963 0.947 0.963 0.969 0.916 0.924 0.939 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
55. Y62E10A.11 mdt-9 5971 7.558 0.940 0.937 0.941 0.937 0.929 0.959 0.959 0.956 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
56. Y65B4BR.5 icd-2 58321 7.557 0.927 0.964 0.955 0.964 0.957 0.950 0.915 0.925 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
57. ZC434.5 ears-1 4725 7.556 0.888 0.967 0.929 0.967 0.964 0.968 0.943 0.930 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
58. C27B7.5 C27B7.5 6331 7.553 0.916 0.947 0.969 0.947 0.927 0.961 0.939 0.947
59. B0205.11 mrpl-9 9162 7.553 0.958 0.937 0.943 0.937 0.949 0.924 0.958 0.947 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
60. F33D4.5 mrpl-1 5337 7.553 0.962 0.930 0.956 0.930 0.982 0.941 0.891 0.961 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
61. F58B3.5 mars-1 6729 7.552 0.926 0.950 0.948 0.950 0.964 0.967 0.934 0.913 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
62. Y92H12BR.8 mrpl-15 6344 7.552 0.939 0.944 0.949 0.944 0.976 0.958 0.896 0.946 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
63. C07H6.5 cgh-1 60576 7.551 0.928 0.957 0.909 0.957 0.957 0.939 0.947 0.957 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
64. M88.5 zbp-1 11851 7.55 0.908 0.964 0.939 0.964 0.947 0.931 0.930 0.967 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
65. Y71G12B.9 lin-65 7476 7.55 0.899 0.962 0.943 0.962 0.969 0.956 0.925 0.934 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
66. D2013.7 eif-3.F 21004 7.548 0.923 0.951 0.965 0.951 0.927 0.954 0.926 0.951 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
67. F23F1.1 nfyc-1 9983 7.548 0.913 0.954 0.936 0.954 0.979 0.957 0.933 0.922 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
68. C25A1.10 dao-5 18351 7.546 0.862 0.960 0.936 0.960 0.975 0.956 0.952 0.945 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
69. K08F11.3 cif-1 10218 7.544 0.927 0.948 0.947 0.948 0.936 0.955 0.926 0.957 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
70. F42A10.1 abcf-3 5557 7.544 0.939 0.939 0.971 0.939 0.964 0.949 0.886 0.957 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
71. K11D12.2 pqn-51 15951 7.544 0.923 0.923 0.963 0.923 0.953 0.965 0.950 0.944 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
72. B0336.9 swp-1 52442 7.543 0.934 0.946 0.917 0.946 0.975 0.954 0.940 0.931 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
73. T11G6.1 hars-1 7908 7.542 0.928 0.961 0.958 0.961 0.901 0.969 0.914 0.950 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
74. K01G5.2 hpl-2 6781 7.541 0.914 0.966 0.954 0.966 0.969 0.954 0.881 0.937 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
75. F56D2.6 ddx-15 12282 7.541 0.931 0.944 0.962 0.944 0.935 0.965 0.912 0.948 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
76. C34E10.5 prmt-5 12277 7.54 0.913 0.955 0.962 0.955 0.935 0.969 0.903 0.948 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
77. F10E7.6 F10E7.6 2788 7.54 0.920 0.934 0.938 0.934 0.955 0.956 0.944 0.959
78. C34E10.2 gop-2 5684 7.538 0.922 0.937 0.970 0.937 0.950 0.944 0.971 0.907 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
79. W06H3.3 ctps-1 8363 7.537 0.916 0.923 0.957 0.923 0.948 0.959 0.971 0.940 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
80. B0035.12 sart-3 7188 7.536 0.929 0.959 0.934 0.959 0.970 0.968 0.908 0.909 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
81. C26E6.4 rpb-2 7053 7.536 0.909 0.963 0.941 0.963 0.935 0.969 0.933 0.923 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
82. T02G5.9 kars-1 9763 7.535 0.910 0.946 0.946 0.946 0.963 0.952 0.955 0.917 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
83. C27H6.2 ruvb-1 6291 7.532 0.917 0.981 0.928 0.981 0.956 0.935 0.928 0.906 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
84. T05C12.7 cct-1 41264 7.532 0.918 0.954 0.955 0.954 0.957 0.936 0.925 0.933 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
85. Y54E10BR.6 rpb-7 2942 7.531 0.895 0.948 0.906 0.948 0.971 0.947 0.945 0.971 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_491093]
86. F58D5.1 hrp-2 17211 7.531 0.933 0.945 0.978 0.945 0.912 0.953 0.933 0.932 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
87. Y37D8A.11 cec-7 8801 7.53 0.940 0.948 0.968 0.948 0.970 0.943 0.934 0.879 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
88. H21P03.1 mbf-1 25586 7.529 0.914 0.958 0.948 0.958 0.911 0.933 0.937 0.970 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
89. T23H2.1 npp-12 12425 7.528 0.932 0.927 0.942 0.927 0.937 0.966 0.941 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
90. F08F8.3 kap-1 31437 7.528 0.946 0.954 0.947 0.954 0.926 0.928 0.927 0.946 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
91. F55H2.6 clu-1 21404 7.528 0.892 0.952 0.939 0.952 0.953 0.971 0.930 0.939 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
92. D2096.8 nap-1 59459 7.527 0.915 0.944 0.919 0.944 0.973 0.956 0.920 0.956 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
93. F10G7.3 unc-85 5206 7.525 0.927 0.934 0.958 0.934 0.960 0.925 0.958 0.929 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
94. Y54E5A.4 npp-4 6288 7.525 0.940 0.932 0.952 0.932 0.955 0.938 0.930 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
95. B0303.15 mrpl-11 9889 7.525 0.903 0.925 0.963 0.925 0.952 0.960 0.973 0.924 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
96. F59A2.1 npp-9 34375 7.524 0.923 0.934 0.920 0.934 0.967 0.956 0.941 0.949 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
97. Y41D4B.19 npp-8 12992 7.524 0.883 0.962 0.948 0.962 0.958 0.955 0.956 0.900 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
98. T06A10.1 mel-46 4407 7.522 0.877 0.945 0.949 0.945 0.965 0.952 0.928 0.961 MEL-46; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED26]
99. F09G2.9 attf-2 14771 7.522 0.927 0.924 0.939 0.924 0.957 0.963 0.935 0.953 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
100. C52E4.3 snr-4 19308 7.52 0.927 0.955 0.964 0.955 0.950 0.960 0.870 0.939 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]

There are 1434 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA