C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T01B7.3

Gene ID Gene Name Reads Transcripts Annotation
T01B7.3 rab-21 2347 T01B7.3 RAB family [Source:RefSeq peptide;Acc:NP_495854]

Genes with expression patterns similar to T01B7.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T01B7.3 rab-21 2347 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB family [Source:RefSeq peptide;Acc:NP_495854]
2. D2030.8 D2030.8 2645 7.63 0.930 0.963 0.966 0.963 0.932 0.964 0.944 0.968
3. T19B4.2 npp-7 13073 7.608 0.933 0.940 0.957 0.940 0.966 0.947 0.967 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
4. F56F3.1 ifet-1 25772 7.608 0.931 0.966 0.958 0.966 0.931 0.941 0.957 0.958 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
5. C37A2.2 pqn-20 10913 7.602 0.957 0.960 0.927 0.960 0.980 0.964 0.945 0.909 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
6. K11D12.2 pqn-51 15951 7.601 0.953 0.952 0.953 0.952 0.949 0.966 0.935 0.941 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
7. F58E10.3 ddx-17 15107 7.596 0.934 0.954 0.949 0.954 0.965 0.965 0.952 0.923 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
8. T01E8.6 mrps-14 9328 7.594 0.934 0.932 0.953 0.932 0.966 0.950 0.974 0.953 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
9. C25D7.8 otub-1 7941 7.591 0.950 0.953 0.940 0.953 0.961 0.949 0.956 0.929 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
10. T11G6.1 hars-1 7908 7.584 0.930 0.943 0.959 0.943 0.969 0.965 0.955 0.920 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
11. Y62E10A.11 mdt-9 5971 7.579 0.925 0.933 0.949 0.933 0.965 0.958 0.980 0.936 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
12. C55A6.2 ttll-5 5158 7.562 0.949 0.945 0.944 0.945 0.963 0.966 0.956 0.894 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
13. T12G3.5 mrpl-51 5192 7.561 0.951 0.946 0.924 0.946 0.934 0.953 0.950 0.957 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
14. B0205.11 mrpl-9 9162 7.56 0.931 0.923 0.974 0.923 0.958 0.968 0.960 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
15. Y54E5A.4 npp-4 6288 7.558 0.953 0.936 0.951 0.936 0.957 0.943 0.967 0.915 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
16. W02F12.6 sna-1 7338 7.558 0.956 0.946 0.910 0.946 0.948 0.959 0.965 0.928 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
17. F56D2.6 ddx-15 12282 7.555 0.874 0.945 0.961 0.945 0.968 0.970 0.951 0.941 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
18. C02B10.5 C02B10.5 9171 7.555 0.931 0.940 0.945 0.940 0.952 0.969 0.959 0.919
19. Y38A8.3 ulp-2 7403 7.554 0.928 0.958 0.957 0.958 0.965 0.954 0.964 0.870 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
20. B0035.11 leo-1 2968 7.548 0.926 0.959 0.912 0.959 0.971 0.942 0.934 0.945 RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
21. R06A4.4 imb-2 10302 7.548 0.936 0.962 0.952 0.962 0.914 0.958 0.925 0.939 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
22. K01G5.4 ran-1 32379 7.545 0.928 0.934 0.920 0.934 0.957 0.980 0.971 0.921 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
23. F52C9.7 mog-3 9880 7.545 0.917 0.948 0.946 0.948 0.938 0.957 0.976 0.915 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
24. F13G3.4 dylt-1 21345 7.542 0.929 0.935 0.947 0.935 0.954 0.960 0.932 0.950 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
25. C15H11.4 dhs-22 21674 7.542 0.968 0.941 0.947 0.941 0.933 0.945 0.936 0.931 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
26. F53F10.5 npp-11 3378 7.539 0.933 0.954 0.914 0.954 0.948 0.948 0.949 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
27. R07E5.14 rnp-4 11659 7.537 0.947 0.933 0.942 0.933 0.953 0.969 0.936 0.924 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
28. F33D4.5 mrpl-1 5337 7.536 0.905 0.940 0.941 0.940 0.933 0.971 0.965 0.941 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
29. ZK1058.4 ccdc-47 8879 7.535 0.920 0.932 0.945 0.932 0.954 0.975 0.947 0.930 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
30. K08E7.1 eak-7 18960 7.534 0.955 0.922 0.933 0.922 0.953 0.954 0.954 0.941 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
31. F38A5.1 odr-8 5283 7.534 0.931 0.943 0.941 0.943 0.963 0.933 0.958 0.922 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
32. ZK616.6 perm-3 16186 7.533 0.945 0.959 0.948 0.959 0.934 0.958 0.923 0.907 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
33. T23H2.1 npp-12 12425 7.531 0.921 0.916 0.945 0.916 0.973 0.974 0.972 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
34. F32A5.7 lsm-4 3785 7.529 0.929 0.935 0.936 0.935 0.966 0.962 0.966 0.900 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
35. Y53C12B.3 nos-3 20231 7.529 0.886 0.941 0.956 0.941 0.945 0.961 0.959 0.940 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. F22D6.3 nars-1 18624 7.529 0.910 0.961 0.943 0.961 0.946 0.978 0.912 0.918 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
37. ZC410.2 mppb-1 3991 7.529 0.970 0.922 0.898 0.922 0.950 0.970 0.947 0.950 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
38. T28D9.10 snr-3 9995 7.528 0.927 0.946 0.928 0.946 0.950 0.963 0.945 0.923 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
39. Y116A8C.42 snr-1 17062 7.526 0.906 0.944 0.935 0.944 0.955 0.951 0.968 0.923 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
40. F32H2.1 snpc-4 7581 7.525 0.905 0.937 0.901 0.937 0.968 0.971 0.962 0.944 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
41. Y55F3AM.12 dcap-1 8679 7.525 0.936 0.962 0.948 0.962 0.931 0.977 0.888 0.921 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
42. C34E10.5 prmt-5 12277 7.524 0.895 0.934 0.949 0.934 0.952 0.965 0.965 0.930 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
43. F42A6.7 hrp-1 28201 7.522 0.910 0.908 0.962 0.908 0.969 0.956 0.970 0.939 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
44. R53.2 dtmk-1 6821 7.521 0.913 0.943 0.957 0.943 0.967 0.951 0.934 0.913 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
45. C08B11.5 sap-49 10553 7.521 0.924 0.923 0.943 0.923 0.946 0.947 0.962 0.953 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
46. C06A1.5 rpb-6 7515 7.52 0.924 0.915 0.926 0.915 0.966 0.945 0.976 0.953 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
47. D2013.2 wdfy-2 7286 7.52 0.963 0.941 0.944 0.941 0.941 0.969 0.886 0.935 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
48. Y37D8A.9 mrg-1 14369 7.519 0.917 0.949 0.928 0.949 0.934 0.963 0.953 0.926 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
49. Y41D4B.13 ced-2 10100 7.519 0.912 0.953 0.947 0.953 0.938 0.949 0.935 0.932 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
50. F28H1.3 aars-2 13537 7.519 0.918 0.906 0.956 0.906 0.969 0.979 0.969 0.916 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
51. Y23H5B.6 Y23H5B.6 5886 7.518 0.912 0.941 0.949 0.941 0.940 0.945 0.952 0.938
52. W01G7.3 rpb-11 7826 7.518 0.954 0.944 0.924 0.944 0.970 0.944 0.976 0.862 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
53. Y59A8B.12 Y59A8B.12 2566 7.516 0.888 0.962 0.909 0.962 0.957 0.981 0.948 0.909
54. C27B7.1 spr-2 14958 7.515 0.930 0.948 0.947 0.948 0.964 0.933 0.958 0.887 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
55. ZK863.6 dpy-30 16177 7.515 0.913 0.931 0.953 0.931 0.967 0.959 0.937 0.924 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
56. T08B2.9 fars-1 12650 7.513 0.923 0.934 0.952 0.934 0.932 0.959 0.959 0.920 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
57. C32D5.5 set-4 7146 7.512 0.957 0.958 0.935 0.958 0.954 0.928 0.958 0.864 Histone-lysine N-methyltransferase Suv4-20 [Source:UniProtKB/Swiss-Prot;Acc:Q09265]
58. R12C12.2 ran-5 14517 7.511 0.939 0.921 0.941 0.921 0.966 0.965 0.971 0.887 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
59. T10B5.5 cct-7 24616 7.511 0.880 0.919 0.938 0.919 0.972 0.987 0.956 0.940 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
60. W06E11.4 sbds-1 6701 7.51 0.902 0.933 0.957 0.933 0.938 0.955 0.952 0.940 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
61. Y97E10AR.5 rpb-9 3598 7.509 0.947 0.925 0.924 0.925 0.958 0.970 0.948 0.912 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
62. B0035.3 B0035.3 4118 7.507 0.930 0.928 0.960 0.928 0.971 0.955 0.939 0.896
63. ZK742.1 xpo-1 20741 7.507 0.907 0.905 0.958 0.905 0.957 0.958 0.970 0.947 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
64. B0464.7 baf-1 10161 7.507 0.919 0.920 0.909 0.920 0.980 0.971 0.968 0.920 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
65. T05H4.14 gad-1 7979 7.506 0.895 0.970 0.918 0.970 0.960 0.940 0.928 0.925 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
66. Y53C10A.12 hsf-1 7899 7.505 0.915 0.952 0.907 0.952 0.915 0.968 0.946 0.950 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
67. T17E9.2 nmt-1 8017 7.504 0.916 0.938 0.947 0.938 0.933 0.935 0.950 0.947 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
68. F49D11.1 prp-17 5338 7.504 0.867 0.961 0.908 0.961 0.926 0.973 0.950 0.958 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
69. Y56A3A.20 ccf-1 18463 7.503 0.973 0.954 0.967 0.954 0.933 0.952 0.905 0.865 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
70. K08D10.4 rnp-2 2338 7.502 0.956 0.937 0.947 0.937 0.943 0.945 0.958 0.879 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500504]
71. C08F8.1 pfd-1 10199 7.502 0.941 0.924 0.893 0.924 0.942 0.973 0.970 0.935 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
72. Y17G7A.1 hmg-12 29989 7.501 0.930 0.945 0.955 0.945 0.944 0.936 0.962 0.884 HMG [Source:RefSeq peptide;Acc:NP_496544]
73. Y73B6BL.32 lsm-8 11002 7.501 0.938 0.921 0.933 0.921 0.951 0.931 0.957 0.949 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
74. Y41D4B.19 npp-8 12992 7.501 0.896 0.933 0.965 0.933 0.931 0.966 0.960 0.917 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
75. T22C1.3 T22C1.3 2305 7.5 0.937 0.942 0.951 0.942 0.943 0.937 0.927 0.921
76. K08F4.2 gtbp-1 25222 7.5 0.911 0.919 0.951 0.919 0.952 0.972 0.934 0.942 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
77. F53A2.4 nud-1 7818 7.5 0.928 0.957 0.950 0.957 0.923 0.935 0.938 0.912 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
78. C25A1.4 C25A1.4 15507 7.499 0.962 0.939 0.939 0.939 0.943 0.914 0.974 0.889
79. Y54E2A.2 smg-9 4494 7.498 0.900 0.957 0.945 0.957 0.955 0.959 0.899 0.926
80. F10E9.7 F10E9.7 1842 7.498 0.922 0.936 0.928 0.936 0.937 0.951 0.963 0.925
81. B0303.15 mrpl-11 9889 7.498 0.930 0.920 0.937 0.920 0.957 0.941 0.965 0.928 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
82. C26E6.4 rpb-2 7053 7.498 0.882 0.925 0.941 0.925 0.965 0.977 0.969 0.914 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
83. F59E12.11 sam-4 8179 7.497 0.908 0.918 0.947 0.918 0.943 0.971 0.969 0.923
84. Y56A3A.29 ung-1 1900 7.495 0.875 0.950 0.943 0.950 0.955 0.934 0.966 0.922 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
85. T16G1.11 eif-3.K 14014 7.494 0.920 0.921 0.946 0.921 0.945 0.969 0.967 0.905 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
86. C01F6.8 icln-1 6586 7.493 0.916 0.945 0.957 0.945 0.943 0.972 0.938 0.877 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
87. T02G5.9 kars-1 9763 7.492 0.927 0.932 0.915 0.932 0.958 0.964 0.956 0.908 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
88. C43E11.10 cdc-6 5331 7.492 0.958 0.956 0.911 0.956 0.941 0.972 0.903 0.895 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
89. C34E10.2 gop-2 5684 7.49 0.905 0.931 0.952 0.931 0.941 0.934 0.943 0.953 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
90. T19C3.8 fem-2 9225 7.488 0.926 0.946 0.965 0.946 0.965 0.953 0.943 0.844 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
91. ZK686.4 snu-23 9040 7.487 0.917 0.951 0.919 0.951 0.967 0.965 0.917 0.900 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
92. Y43F4B.4 npp-18 4780 7.487 0.939 0.926 0.911 0.926 0.933 0.950 0.963 0.939 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
93. Y37E3.3 rpb-10 4051 7.487 0.938 0.916 0.915 0.916 0.970 0.952 0.946 0.934 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
94. F58D5.1 hrp-2 17211 7.487 0.903 0.921 0.936 0.921 0.975 0.973 0.978 0.880 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
95. T03F6.5 lis-1 8818 7.487 0.931 0.923 0.945 0.923 0.956 0.935 0.928 0.946 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
96. K11H3.6 mrpl-36 7328 7.487 0.958 0.922 0.938 0.922 0.945 0.963 0.965 0.874 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
97. C33H5.12 rsp-6 23342 7.487 0.895 0.940 0.936 0.940 0.973 0.943 0.941 0.919 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
98. T05C12.7 cct-1 41264 7.486 0.928 0.947 0.945 0.947 0.933 0.952 0.929 0.905 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
99. T05H4.6 erfa-1 12542 7.485 0.931 0.931 0.961 0.931 0.928 0.945 0.950 0.908 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
100. T01C3.8 mut-15 4359 7.484 0.930 0.947 0.939 0.947 0.945 0.963 0.945 0.868 MUTator [Source:RefSeq peptide;Acc:NP_001256638]

There are 1659 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA