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Results for F56D2.6

Gene ID Gene Name Reads Transcripts Annotation
F56D2.6 ddx-15 12282 F56D2.6a, F56D2.6b Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]

Genes with expression patterns similar to F56D2.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56D2.6 ddx-15 12282 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
2. Y46G5A.4 snrp-200 13827 7.845 0.956 0.979 0.988 0.979 0.980 0.994 0.991 0.978 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
3. C26E6.4 rpb-2 7053 7.841 0.965 0.982 0.970 0.982 0.993 0.990 0.984 0.975 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
4. T23H2.1 npp-12 12425 7.818 0.968 0.979 0.986 0.979 0.994 0.989 0.960 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
5. F32H2.1 snpc-4 7581 7.811 0.973 0.971 0.960 0.971 0.996 0.992 0.969 0.979 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
6. Y53C12B.3 nos-3 20231 7.808 0.967 0.983 0.982 0.983 0.979 0.975 0.948 0.991 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
7. C34E10.5 prmt-5 12277 7.8 0.958 0.985 0.982 0.985 0.984 0.979 0.973 0.954 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
8. ZK328.2 eftu-2 7040 7.799 0.972 0.976 0.950 0.976 0.974 0.973 0.989 0.989 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
9. F58D5.1 hrp-2 17211 7.798 0.965 0.979 0.968 0.979 0.979 0.989 0.972 0.967 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
10. R13F6.10 cra-1 11610 7.793 0.969 0.966 0.964 0.966 0.988 0.993 0.972 0.975 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
11. Y17G7A.1 hmg-12 29989 7.786 0.956 0.976 0.977 0.976 0.990 0.986 0.968 0.957 HMG [Source:RefSeq peptide;Acc:NP_496544]
12. Y38A8.3 ulp-2 7403 7.781 0.965 0.982 0.979 0.982 0.988 0.975 0.973 0.937 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
13. B0464.2 ctr-9 7610 7.776 0.956 0.970 0.952 0.970 0.985 0.990 0.973 0.980 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
14. Y37E3.15 npp-13 7250 7.769 0.960 0.968 0.959 0.968 0.981 0.984 0.966 0.983 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
15. F28H1.3 aars-2 13537 7.768 0.943 0.977 0.980 0.977 0.989 0.973 0.949 0.980 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
16. F33D4.5 mrpl-1 5337 7.767 0.959 0.969 0.978 0.969 0.960 0.974 0.971 0.987 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
17. C43E11.1 acin-1 7781 7.765 0.963 0.981 0.980 0.981 0.969 0.968 0.951 0.972 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
18. Y23H5B.6 Y23H5B.6 5886 7.764 0.955 0.984 0.974 0.984 0.983 0.974 0.929 0.981
19. F42A6.7 hrp-1 28201 7.764 0.937 0.966 0.985 0.966 0.976 0.983 0.975 0.976 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
20. Y71G12B.9 lin-65 7476 7.763 0.958 0.985 0.973 0.985 0.969 0.989 0.933 0.971 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
21. Y18D10A.1 attf-6 6942 7.76 0.955 0.966 0.977 0.966 0.975 0.969 0.972 0.980 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
22. T16G1.11 eif-3.K 14014 7.759 0.944 0.975 0.955 0.975 0.984 0.980 0.983 0.963 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
23. Y54E5A.4 npp-4 6288 7.758 0.925 0.981 0.983 0.981 0.994 0.961 0.946 0.987 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
24. C26D10.2 hel-1 28697 7.757 0.939 0.978 0.965 0.978 0.966 0.977 0.971 0.983 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
25. C53D5.6 imb-3 28921 7.757 0.964 0.983 0.968 0.983 0.954 0.955 0.979 0.971 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
26. F23F1.1 nfyc-1 9983 7.755 0.954 0.969 0.970 0.969 0.962 0.982 0.977 0.972 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
27. F32E10.6 cec-5 10643 7.755 0.942 0.961 0.980 0.961 0.986 0.982 0.981 0.962 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
28. Y116A8C.42 snr-1 17062 7.754 0.947 0.980 0.976 0.980 0.979 0.991 0.924 0.977 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
29. F22D6.3 nars-1 18624 7.754 0.949 0.983 0.950 0.983 0.976 0.984 0.957 0.972 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
30. W02B12.3 rsp-1 9235 7.753 0.949 0.957 0.983 0.957 0.975 0.992 0.978 0.962 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
31. K08F11.3 cif-1 10218 7.753 0.951 0.970 0.949 0.970 0.972 0.979 0.979 0.983 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
32. K01G5.4 ran-1 32379 7.753 0.946 0.968 0.962 0.968 0.982 0.996 0.952 0.979 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
33. Y37A1B.1 lst-3 10739 7.752 0.968 0.974 0.967 0.974 0.972 0.947 0.977 0.973 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
34. T05E8.3 let-355 8169 7.749 0.951 0.977 0.976 0.977 0.986 0.951 0.961 0.970
35. Y39G10AR.7 ekl-7 7072 7.749 0.961 0.970 0.984 0.970 0.983 0.975 0.928 0.978
36. F18C5.2 wrn-1 3792 7.745 0.940 0.978 0.973 0.978 0.979 0.971 0.981 0.945 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
37. C33H5.12 rsp-6 23342 7.745 0.929 0.972 0.977 0.972 0.969 0.980 0.978 0.968 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
38. Y37D8A.11 cec-7 8801 7.744 0.969 0.985 0.983 0.985 0.978 0.974 0.924 0.946 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
39. C14A4.4 crn-3 6558 7.744 0.974 0.974 0.940 0.974 0.951 0.986 0.969 0.976 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
40. C08B11.5 sap-49 10553 7.743 0.926 0.975 0.974 0.975 0.976 0.971 0.967 0.979 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
41. F58E10.3 ddx-17 15107 7.742 0.943 0.989 0.979 0.989 0.979 0.968 0.911 0.984 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
42. C48B4.11 C48B4.11 4384 7.741 0.941 0.973 0.962 0.973 0.989 0.977 0.958 0.968
43. D2030.6 prg-1 26751 7.74 0.977 0.963 0.986 0.963 0.973 0.972 0.955 0.951 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
44. Y34D9A.1 mrpl-38 5291 7.739 0.947 0.976 0.964 0.976 0.959 0.982 0.983 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
45. K02F2.3 teg-4 3873 7.739 0.914 0.981 0.970 0.981 0.974 0.980 0.969 0.970 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
46. T22D1.10 ruvb-2 6505 7.736 0.955 0.986 0.967 0.986 0.971 0.965 0.946 0.960 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
47. C04H5.6 mog-4 4517 7.735 0.938 0.970 0.954 0.970 0.982 0.970 0.980 0.971 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
48. T10F2.4 prp-19 11298 7.734 0.916 0.983 0.968 0.983 0.979 0.955 0.959 0.991 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
49. F29C4.6 tut-1 5637 7.734 0.932 0.976 0.963 0.976 0.981 0.955 0.980 0.971 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
50. T28D9.2 rsp-5 6460 7.734 0.946 0.972 0.977 0.972 0.960 0.960 0.966 0.981 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
51. F56D1.7 daz-1 23684 7.733 0.966 0.977 0.983 0.977 0.964 0.943 0.949 0.974 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
52. ZK742.1 xpo-1 20741 7.731 0.908 0.980 0.985 0.980 0.985 0.969 0.939 0.985 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
53. F36A2.1 cids-2 4551 7.731 0.921 0.986 0.954 0.986 0.980 0.970 0.980 0.954 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
54. Y65B4BL.2 deps-1 18277 7.727 0.931 0.975 0.972 0.975 0.980 0.968 0.974 0.952
55. R144.7 larp-1 24669 7.725 0.947 0.960 0.949 0.960 0.970 0.982 0.978 0.979 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
56. T23B5.1 prmt-3 10677 7.725 0.935 0.956 0.983 0.956 0.985 0.978 0.975 0.957 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
57. B0035.3 B0035.3 4118 7.719 0.939 0.952 0.988 0.952 0.989 0.961 0.984 0.954
58. R12C12.2 ran-5 14517 7.718 0.941 0.967 0.974 0.967 0.986 0.965 0.964 0.954 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
59. T11G6.1 hars-1 7908 7.717 0.945 0.976 0.969 0.976 0.973 0.967 0.952 0.959 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
60. F37E3.1 ncbp-1 5649 7.715 0.952 0.978 0.974 0.978 0.960 0.972 0.961 0.940 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
61. C02B10.5 C02B10.5 9171 7.713 0.921 0.948 0.977 0.948 0.992 0.974 0.975 0.978
62. F26F4.10 rars-1 9971 7.713 0.963 0.976 0.965 0.976 0.967 0.958 0.957 0.951 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
63. F28B3.8 imb-1 7515 7.712 0.959 0.976 0.952 0.976 0.951 0.953 0.970 0.975 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
64. T19B4.2 npp-7 13073 7.712 0.925 0.967 0.978 0.967 0.990 0.957 0.949 0.979 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
65. T10B5.5 cct-7 24616 7.712 0.956 0.969 0.977 0.969 0.986 0.967 0.924 0.964 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
66. ZK1128.6 ttll-4 6059 7.711 0.926 0.991 0.975 0.991 0.956 0.971 0.924 0.977 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
67. H19N07.1 erfa-3 19869 7.71 0.932 0.989 0.967 0.989 0.980 0.963 0.961 0.929 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
68. F56D12.5 vig-1 42594 7.708 0.920 0.959 0.929 0.959 0.988 0.992 0.974 0.987 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
69. T26A5.5 jhdm-1 12698 7.708 0.967 0.972 0.979 0.972 0.983 0.976 0.950 0.909 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
70. T12E12.2 cec-6 4758 7.708 0.941 0.983 0.985 0.983 0.966 0.976 0.925 0.949 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
71. T25G3.4 T25G3.4 9394 7.707 0.963 0.980 0.975 0.980 0.959 0.971 0.915 0.964 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
72. Y37D8A.9 mrg-1 14369 7.707 0.923 0.981 0.971 0.981 0.961 0.988 0.917 0.985 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
73. B0511.8 mrps-30 5050 7.705 0.939 0.958 0.973 0.958 0.985 0.979 0.959 0.954 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
74. K11D12.2 pqn-51 15951 7.704 0.927 0.985 0.986 0.985 0.978 0.955 0.929 0.959 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
75. K08F4.2 gtbp-1 25222 7.704 0.949 0.983 0.970 0.983 0.967 0.980 0.876 0.996 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
76. R05D3.11 met-2 3364 7.703 0.967 0.972 0.962 0.972 0.961 0.978 0.961 0.930 Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
77. T01E8.6 mrps-14 9328 7.702 0.933 0.980 0.957 0.980 0.968 0.959 0.952 0.973 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
78. C50C3.6 prp-8 19582 7.701 0.973 0.980 0.968 0.980 0.959 0.934 0.938 0.969 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
79. K02F2.4 ulp-5 3433 7.701 0.931 0.969 0.976 0.969 0.975 0.980 0.952 0.949 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
80. T04A8.11 mrpl-16 5998 7.699 0.923 0.954 0.979 0.954 0.982 0.983 0.959 0.965 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
81. Y41D4B.19 npp-8 12992 7.698 0.944 0.983 0.987 0.983 0.952 0.960 0.937 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
82. Y54E5A.6 Y54E5A.6 770 7.697 0.932 0.962 0.982 0.962 0.979 0.982 0.930 0.968
83. F28C6.6 suf-1 3642 7.697 0.938 0.965 0.948 0.965 0.990 0.977 0.974 0.940 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
84. F59A2.1 npp-9 34375 7.696 0.964 0.971 0.965 0.971 0.973 0.969 0.905 0.978 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
85. T08B2.9 fars-1 12650 7.696 0.939 0.986 0.974 0.986 0.944 0.953 0.965 0.949 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
86. E01A2.4 let-504 9788 7.695 0.966 0.971 0.937 0.971 0.979 0.946 0.962 0.963
87. C27B7.1 spr-2 14958 7.691 0.895 0.973 0.973 0.973 0.988 0.950 0.970 0.969 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
88. C06A1.5 rpb-6 7515 7.691 0.953 0.964 0.953 0.964 0.968 0.972 0.951 0.966 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
89. C18A3.5 tiar-1 25400 7.69 0.950 0.982 0.982 0.982 0.958 0.949 0.974 0.913 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
90. F36A4.7 ama-1 13620 7.69 0.964 0.971 0.977 0.971 0.963 0.960 0.960 0.924 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
91. Y56A3A.17 npp-16 5391 7.687 0.934 0.958 0.977 0.958 0.967 0.986 0.964 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
92. ZK1058.4 ccdc-47 8879 7.686 0.925 0.973 0.959 0.973 0.976 0.961 0.956 0.963 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
93. T05C3.5 dnj-19 20420 7.685 0.976 0.979 0.973 0.979 0.970 0.950 0.952 0.906 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_504452]
94. F28B3.7 him-1 18274 7.683 0.961 0.983 0.971 0.983 0.952 0.966 0.956 0.911 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
95. F52C9.7 mog-3 9880 7.683 0.932 0.950 0.974 0.950 0.972 0.972 0.983 0.950 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
96. C52E4.6 cyl-1 6405 7.682 0.953 0.977 0.944 0.977 0.954 0.963 0.962 0.952 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
97. C28H8.9 dpff-1 8684 7.682 0.949 0.973 0.972 0.973 0.966 0.964 0.938 0.947 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
98. F49D11.1 prp-17 5338 7.679 0.942 0.976 0.965 0.976 0.944 0.976 0.939 0.961 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
99. C06E7.1 sams-3 26921 7.679 0.971 0.967 0.973 0.967 0.948 0.965 0.972 0.916 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
100. T17E9.2 nmt-1 8017 7.679 0.895 0.987 0.966 0.987 0.957 0.959 0.954 0.974 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA