C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F22B5.9

Gene ID Gene Name Reads Transcripts Annotation
F22B5.9 fars-3 7209 F22B5.9 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]

Genes with expression patterns similar to F22B5.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F22B5.9 fars-3 7209 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
2. T08B2.9 fars-1 12650 7.813 0.978 0.970 0.985 0.970 0.967 0.980 0.984 0.979 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
3. K08F11.3 cif-1 10218 7.806 0.979 0.977 0.974 0.977 0.992 0.972 0.980 0.955 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
4. T02G5.9 kars-1 9763 7.786 0.975 0.973 0.959 0.973 0.986 0.978 0.980 0.962 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
5. D2013.7 eif-3.F 21004 7.784 0.968 0.983 0.974 0.983 0.982 0.970 0.957 0.967 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
6. T01E8.6 mrps-14 9328 7.783 0.962 0.952 0.986 0.952 0.976 0.991 0.989 0.975 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
7. T05H4.6 erfa-1 12542 7.774 0.978 0.968 0.987 0.968 0.979 0.959 0.976 0.959 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
8. C18E9.6 tomm-40 13426 7.771 0.980 0.972 0.966 0.972 0.983 0.974 0.962 0.962 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
9. C34E10.5 prmt-5 12277 7.77 0.960 0.975 0.962 0.975 0.980 0.982 0.972 0.964 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
10. T24H7.1 phb-2 28775 7.754 0.964 0.951 0.954 0.951 0.990 0.980 0.980 0.984 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
11. T16G1.11 eif-3.K 14014 7.753 0.973 0.948 0.969 0.948 0.991 0.968 0.974 0.982 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
12. B0464.1 dars-1 12331 7.751 0.967 0.966 0.970 0.966 0.987 0.939 0.975 0.981 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
13. Y50D7A.9 taco-1 5949 7.749 0.972 0.970 0.974 0.970 0.973 0.965 0.955 0.970 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
14. F28H1.3 aars-2 13537 7.743 0.955 0.960 0.953 0.960 0.989 0.977 0.976 0.973 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
15. C26D10.2 hel-1 28697 7.742 0.967 0.967 0.974 0.967 0.980 0.942 0.968 0.977 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
16. T17E9.2 nmt-1 8017 7.74 0.970 0.958 0.986 0.958 0.981 0.969 0.955 0.963 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
17. ZK652.1 snr-5 5993 7.738 0.962 0.970 0.952 0.970 0.986 0.989 0.948 0.961 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
18. F58B3.5 mars-1 6729 7.736 0.982 0.967 0.969 0.967 0.964 0.987 0.962 0.938 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
19. W08E3.3 ola-1 20885 7.736 0.967 0.960 0.983 0.960 0.977 0.962 0.965 0.962 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
20. T11G6.1 hars-1 7908 7.731 0.960 0.975 0.971 0.975 0.984 0.975 0.948 0.943 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
21. K08F4.2 gtbp-1 25222 7.729 0.971 0.978 0.961 0.978 0.958 0.972 0.944 0.967 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
22. F55H2.6 clu-1 21404 7.72 0.936 0.980 0.956 0.980 0.969 0.972 0.957 0.970 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
23. Y18D10A.19 fkb-2 48128 7.717 0.952 0.969 0.965 0.969 0.982 0.930 0.973 0.977 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
24. F57B9.5 byn-1 58236 7.716 0.981 0.970 0.976 0.970 0.965 0.937 0.944 0.973 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
25. F58D5.1 hrp-2 17211 7.716 0.959 0.962 0.959 0.962 0.980 0.957 0.964 0.973 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
26. F42A10.1 abcf-3 5557 7.716 0.944 0.966 0.979 0.966 0.980 0.963 0.954 0.964 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
27. Y116A8C.42 snr-1 17062 7.71 0.977 0.957 0.955 0.957 0.958 0.962 0.973 0.971 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
28. F22D6.3 nars-1 18624 7.708 0.957 0.951 0.939 0.951 0.993 0.983 0.950 0.984 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
29. C05D11.10 mrps-17 4613 7.706 0.948 0.942 0.963 0.942 0.987 0.985 0.984 0.955 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
30. F13G3.4 dylt-1 21345 7.705 0.961 0.965 0.966 0.965 0.979 0.952 0.954 0.963 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
31. T06A10.4 lsy-13 7631 7.704 0.981 0.930 0.960 0.930 0.987 0.973 0.972 0.971
32. K07A12.7 mrps-15 6325 7.701 0.956 0.963 0.926 0.963 0.985 0.965 0.982 0.961 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
33. Y65B4BR.5 icd-2 58321 7.701 0.955 0.969 0.971 0.969 0.963 0.949 0.957 0.968 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
34. F25H5.4 eef-2 34846 7.699 0.967 0.958 0.939 0.958 0.991 0.952 0.976 0.958 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
35. F26F4.10 rars-1 9971 7.699 0.954 0.952 0.961 0.952 0.988 0.970 0.977 0.945 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
36. T28D9.10 snr-3 9995 7.698 0.975 0.953 0.976 0.953 0.960 0.983 0.945 0.953 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
37. Y34D9A.1 mrpl-38 5291 7.698 0.942 0.955 0.950 0.955 0.990 0.975 0.958 0.973 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
38. H19N07.1 erfa-3 19869 7.698 0.983 0.966 0.967 0.966 0.983 0.960 0.908 0.965 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
39. Y40B1B.5 eif-3.J 15061 7.697 0.978 0.958 0.974 0.958 0.974 0.963 0.941 0.951 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
40. F59A2.3 cri-3 15077 7.696 0.961 0.950 0.960 0.950 0.959 0.989 0.952 0.975 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
41. T21C9.12 scpl-4 14723 7.695 0.951 0.954 0.971 0.954 0.988 0.980 0.952 0.945 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
42. F56D12.5 vig-1 42594 7.695 0.959 0.964 0.954 0.964 0.980 0.948 0.964 0.962 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
43. Y37E3.9 phb-1 29211 7.694 0.962 0.957 0.955 0.957 0.966 0.959 0.971 0.967 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
44. K04D7.2 mspn-1 48187 7.69 0.956 0.959 0.967 0.959 0.973 0.952 0.978 0.946 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
45. F54B3.3 atad-3 9583 7.688 0.960 0.932 0.966 0.932 0.973 0.984 0.974 0.967 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
46. C26E6.4 rpb-2 7053 7.687 0.923 0.959 0.970 0.959 0.983 0.981 0.967 0.945 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
47. B0261.4 mrpl-47 8210 7.686 0.953 0.941 0.961 0.941 0.988 0.972 0.974 0.956 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
48. Y49A3A.5 cyn-1 6411 7.685 0.953 0.945 0.962 0.945 0.981 0.962 0.968 0.969 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
49. F29C4.6 tut-1 5637 7.681 0.964 0.954 0.970 0.954 0.978 0.970 0.951 0.940 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
50. F42A6.7 hrp-1 28201 7.678 0.969 0.931 0.954 0.931 0.986 0.956 0.978 0.973 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
51. T12E12.2 cec-6 4758 7.678 0.939 0.964 0.955 0.964 0.973 0.962 0.968 0.953 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
52. T07D4.4 ddx-19 7234 7.678 0.959 0.967 0.984 0.967 0.914 0.986 0.965 0.936 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
53. H21P03.1 mbf-1 25586 7.676 0.981 0.953 0.975 0.953 0.962 0.939 0.945 0.968 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
54. C06A1.5 rpb-6 7515 7.674 0.960 0.966 0.944 0.966 0.955 0.976 0.980 0.927 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
55. F17C11.9 eef-1G 37911 7.672 0.952 0.965 0.961 0.965 0.987 0.933 0.967 0.942 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
56. F58E10.3 ddx-17 15107 7.671 0.941 0.967 0.944 0.967 0.971 0.966 0.949 0.966 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
57. C34E10.11 mrps-26 4649 7.67 0.936 0.961 0.982 0.961 0.929 0.977 0.970 0.954 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
58. Y23H5B.6 Y23H5B.6 5886 7.67 0.956 0.968 0.906 0.968 0.956 0.974 0.972 0.970
59. R13F6.10 cra-1 11610 7.67 0.955 0.953 0.968 0.953 0.987 0.964 0.930 0.960 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
60. B0511.8 mrps-30 5050 7.669 0.938 0.955 0.968 0.955 0.982 0.971 0.979 0.921 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
61. T10B5.5 cct-7 24616 7.667 0.942 0.967 0.962 0.967 0.965 0.949 0.955 0.960 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
62. Y46G5A.4 snrp-200 13827 7.667 0.911 0.955 0.954 0.955 0.985 0.964 0.967 0.976 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
63. C14A4.14 mrps-22 7966 7.666 0.956 0.964 0.952 0.964 0.963 0.961 0.947 0.959 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
64. W04D2.5 mrps-11 5757 7.666 0.988 0.911 0.980 0.911 0.970 0.966 0.970 0.970 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
65. F56B3.12 skr-18 6534 7.661 0.983 0.961 0.943 0.961 0.960 0.941 0.965 0.947 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
66. C47D12.6 tars-1 23488 7.66 0.963 0.955 0.958 0.955 0.981 0.972 0.910 0.966 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
67. Y18D10A.25 fkb-8 8968 7.66 0.958 0.958 0.966 0.958 0.962 0.933 0.979 0.946 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
68. B0205.11 mrpl-9 9162 7.657 0.956 0.954 0.966 0.954 0.978 0.949 0.968 0.932 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
69. F56F3.1 ifet-1 25772 7.657 0.959 0.941 0.957 0.941 0.961 0.964 0.967 0.967 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
70. T21B10.1 mrpl-50 14595 7.656 0.949 0.972 0.973 0.972 0.939 0.983 0.964 0.904 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
71. ZK616.6 perm-3 16186 7.656 0.961 0.936 0.949 0.936 0.987 0.972 0.958 0.957 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
72. Y73B6BL.32 lsm-8 11002 7.655 0.969 0.971 0.958 0.971 0.957 0.939 0.946 0.944 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
73. T23B12.3 mrps-2 5434 7.655 0.946 0.970 0.923 0.970 0.978 0.965 0.955 0.948 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
74. F56D2.6 ddx-15 12282 7.654 0.912 0.960 0.952 0.960 0.983 0.968 0.955 0.964 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
75. R144.7 larp-1 24669 7.654 0.944 0.961 0.952 0.961 0.970 0.952 0.944 0.970 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
76. W06H3.3 ctps-1 8363 7.654 0.967 0.938 0.962 0.938 0.958 0.973 0.974 0.944 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
77. F54A3.3 cct-3 25183 7.653 0.978 0.970 0.982 0.970 0.947 0.959 0.934 0.913 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
78. C33H5.12 rsp-6 23342 7.653 0.933 0.954 0.928 0.954 0.974 0.967 0.958 0.985 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
79. C53D5.6 imb-3 28921 7.653 0.969 0.959 0.965 0.959 0.974 0.917 0.964 0.946 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
80. T12D8.2 drr-2 16208 7.652 0.943 0.969 0.967 0.969 0.954 0.946 0.944 0.960 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
81. T20H4.3 pars-1 8167 7.65 0.958 0.974 0.940 0.974 0.936 0.940 0.949 0.979 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
82. C56C10.8 icd-1 89788 7.65 0.940 0.952 0.946 0.952 0.964 0.950 0.983 0.963 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
83. C09D4.5 rpl-19 56944 7.648 0.939 0.955 0.957 0.955 0.978 0.949 0.975 0.940 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
84. R13A5.12 lpd-7 10476 7.648 0.964 0.943 0.932 0.943 0.977 0.983 0.976 0.930 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
85. Y39E4B.1 abce-1 4178 7.647 0.966 0.933 0.965 0.933 0.982 0.961 0.947 0.960 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]
86. T03D8.2 mrps-12 8253 7.645 0.932 0.951 0.945 0.951 0.961 0.973 0.975 0.957 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
87. ZK1058.4 ccdc-47 8879 7.645 0.950 0.950 0.949 0.950 0.972 0.976 0.943 0.955 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
88. C14A4.1 dohh-1 4890 7.644 0.932 0.959 0.953 0.959 0.972 0.974 0.953 0.942 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
89. C41D11.2 eif-3.H 7520 7.644 0.967 0.960 0.952 0.960 0.946 0.973 0.957 0.929 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
90. Y53C12B.3 nos-3 20231 7.644 0.961 0.954 0.960 0.954 0.953 0.944 0.963 0.955 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
91. Y54E5A.4 npp-4 6288 7.644 0.971 0.926 0.931 0.926 0.984 0.966 0.969 0.971 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
92. Y17G7A.1 hmg-12 29989 7.644 0.965 0.943 0.941 0.943 0.981 0.958 0.974 0.939 HMG [Source:RefSeq peptide;Acc:NP_496544]
93. Y57G11C.34 mrps-7 3450 7.643 0.937 0.929 0.959 0.929 0.981 0.980 0.967 0.961 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
94. C08B11.5 sap-49 10553 7.642 0.961 0.921 0.958 0.921 0.990 0.976 0.974 0.941 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
95. ZC434.5 ears-1 4725 7.641 0.905 0.953 0.938 0.953 0.979 0.970 0.977 0.966 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
96. F10G7.1 tag-151 9031 7.641 0.921 0.983 0.982 0.983 0.955 0.966 0.958 0.893 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
97. H20J04.5 pfd-2 8082 7.639 0.967 0.942 0.938 0.942 0.973 0.952 0.972 0.953 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
98. T28D9.2 rsp-5 6460 7.638 0.948 0.956 0.925 0.956 0.938 0.973 0.975 0.967 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
99. Y54E5A.6 Y54E5A.6 770 7.636 0.946 0.933 0.965 0.933 0.973 0.980 0.964 0.942
100. F53A3.3 rps-22 81093 7.635 0.930 0.954 0.939 0.954 0.974 0.949 0.984 0.951 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]

There are 2119 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA