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Results for Y39G8C.1

Gene ID Gene Name Reads Transcripts Annotation
Y39G8C.1 xrn-1 7488 Y39G8C.1 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]

Genes with expression patterns similar to Y39G8C.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y39G8C.1 xrn-1 7488 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
2. Y40B1B.5 eif-3.J 15061 7.704 0.966 0.961 0.964 0.961 0.963 0.986 0.953 0.950 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
3. Y102A5A.1 cand-1 11808 7.685 0.943 0.955 0.974 0.955 0.973 0.985 0.954 0.946 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
4. Y67D8C.5 eel-1 30623 7.675 0.958 0.950 0.977 0.950 0.952 0.961 0.968 0.959 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
5. Y48A6B.13 spat-2 21773 7.663 0.957 0.964 0.948 0.964 0.975 0.976 0.948 0.931 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
6. T27F7.3 eif-1 28176 7.657 0.944 0.960 0.945 0.960 0.966 0.988 0.951 0.943 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
7. C18D11.4 rsp-8 18308 7.653 0.956 0.972 0.939 0.972 0.967 0.965 0.949 0.933 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
8. C50C3.6 prp-8 19582 7.646 0.962 0.952 0.972 0.952 0.953 0.957 0.951 0.947 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
9. T27E9.7 abcf-2 40273 7.635 0.977 0.937 0.976 0.937 0.960 0.979 0.959 0.910 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
10. T12D8.8 hip-1 18283 7.635 0.937 0.971 0.924 0.971 0.953 0.971 0.958 0.950 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
11. C39E9.14 dli-1 5650 7.629 0.962 0.946 0.970 0.946 0.953 0.986 0.947 0.919 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
12. K04G2.1 iftb-1 12590 7.628 0.942 0.962 0.946 0.962 0.964 0.980 0.951 0.921 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
13. Y116A8C.35 uaf-2 13808 7.624 0.961 0.957 0.951 0.957 0.950 0.970 0.940 0.938 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
14. F42A6.7 hrp-1 28201 7.621 0.961 0.957 0.956 0.957 0.950 0.950 0.943 0.947 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
15. C15H11.4 dhs-22 21674 7.62 0.953 0.967 0.940 0.967 0.937 0.986 0.938 0.932 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
16. F08F8.3 kap-1 31437 7.62 0.973 0.943 0.968 0.943 0.943 0.962 0.947 0.941 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
17. H06H21.3 eif-1.A 40990 7.616 0.957 0.954 0.950 0.954 0.959 0.990 0.960 0.892 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
18. K01C8.10 cct-4 15077 7.615 0.971 0.940 0.958 0.940 0.984 0.935 0.952 0.935 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
19. F36A4.7 ama-1 13620 7.614 0.928 0.961 0.961 0.961 0.942 0.971 0.954 0.936 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
20. Y54E10A.9 vbh-1 28746 7.612 0.962 0.948 0.974 0.948 0.946 0.958 0.958 0.918 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
21. F39B2.10 dnj-12 35162 7.611 0.957 0.961 0.976 0.961 0.932 0.965 0.956 0.903 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
22. Y39G10AR.9 Y39G10AR.9 3972 7.605 0.951 0.941 0.942 0.941 0.946 0.973 0.944 0.967
23. F45H11.3 hpo-35 8299 7.604 0.947 0.954 0.942 0.954 0.977 0.942 0.961 0.927
24. D2013.7 eif-3.F 21004 7.602 0.958 0.931 0.946 0.931 0.957 0.975 0.947 0.957 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
25. K04G7.10 rnp-7 11219 7.602 0.955 0.965 0.941 0.965 0.937 0.974 0.940 0.925 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
26. F26F4.10 rars-1 9971 7.597 0.962 0.931 0.956 0.931 0.950 0.981 0.942 0.944 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
27. T10F2.4 prp-19 11298 7.596 0.956 0.954 0.947 0.954 0.959 0.933 0.927 0.966 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
28. K08E3.8 mdt-29 4678 7.594 0.963 0.950 0.947 0.950 0.958 0.958 0.945 0.923 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
29. C34E10.5 prmt-5 12277 7.594 0.977 0.949 0.962 0.949 0.943 0.933 0.935 0.946 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
30. R144.7 larp-1 24669 7.593 0.945 0.959 0.953 0.959 0.968 0.945 0.916 0.948 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
31. Y48G8AL.6 smg-2 12561 7.592 0.977 0.931 0.935 0.931 0.971 0.971 0.950 0.926 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
32. K08F11.3 cif-1 10218 7.59 0.969 0.942 0.955 0.942 0.927 0.954 0.940 0.961 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
33. B0205.7 kin-3 29775 7.59 0.959 0.961 0.945 0.961 0.945 0.975 0.938 0.906 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
34. Y57A10A.18 pqn-87 31844 7.587 0.958 0.943 0.974 0.943 0.969 0.983 0.939 0.878 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
35. F41E6.4 smk-1 22394 7.585 0.968 0.940 0.945 0.940 0.959 0.956 0.931 0.946 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
36. T23D8.4 eif-3.C 15343 7.584 0.963 0.945 0.953 0.945 0.948 0.956 0.925 0.949 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
37. T20H4.3 pars-1 8167 7.583 0.952 0.933 0.938 0.933 0.942 0.988 0.946 0.951 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
38. Y111B2A.18 rsp-3 43731 7.582 0.953 0.952 0.921 0.952 0.950 0.949 0.963 0.942 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
39. T08B2.9 fars-1 12650 7.582 0.960 0.940 0.971 0.940 0.925 0.975 0.950 0.921 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
40. Y113G7B.23 swsn-1 13766 7.581 0.952 0.936 0.953 0.936 0.930 0.976 0.959 0.939 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
41. C28H8.4 C28H8.4 16252 7.579 0.937 0.950 0.956 0.950 0.973 0.977 0.912 0.924 Putative ER lumen protein-retaining receptor C28H8.4 [Source:UniProtKB/Swiss-Prot;Acc:Q09473]
42. F57B9.5 byn-1 58236 7.579 0.967 0.950 0.925 0.950 0.945 0.966 0.948 0.928 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
43. T10C6.4 srx-44 8454 7.574 0.943 0.968 0.934 0.968 0.956 0.941 0.927 0.937 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
44. C53D5.6 imb-3 28921 7.573 0.952 0.963 0.960 0.963 0.955 0.920 0.929 0.931 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
45. C56C10.8 icd-1 89788 7.571 0.948 0.950 0.912 0.950 0.954 0.954 0.941 0.962 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
46. B0025.2 csn-2 5205 7.569 0.934 0.952 0.932 0.952 0.959 0.959 0.947 0.934 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
47. Y65B4BR.5 icd-2 58321 7.568 0.947 0.938 0.957 0.938 0.952 0.950 0.949 0.937 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
48. F13G3.4 dylt-1 21345 7.567 0.941 0.940 0.964 0.940 0.931 0.978 0.929 0.944 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
49. H19N07.1 erfa-3 19869 7.566 0.960 0.953 0.962 0.953 0.949 0.977 0.918 0.894 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
50. B0511.10 eif-3.E 10041 7.563 0.938 0.960 0.905 0.960 0.937 0.984 0.952 0.927 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
51. F08D12.1 srpa-72 9890 7.563 0.952 0.960 0.947 0.960 0.953 0.956 0.930 0.905 Signal recognition particle subunit SRP72 [Source:UniProtKB/Swiss-Prot;Acc:P91240]
52. C48E7.3 lpd-2 10330 7.563 0.961 0.938 0.933 0.938 0.978 0.949 0.912 0.954 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
53. Y65B4A.3 vps-20 8612 7.56 0.950 0.950 0.962 0.950 0.954 0.952 0.937 0.905 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_490762]
54. F38H4.7 tag-30 4315 7.56 0.942 0.954 0.951 0.954 0.946 0.961 0.942 0.910
55. F22D6.3 nars-1 18624 7.559 0.943 0.955 0.929 0.955 0.951 0.946 0.955 0.925 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
56. EEED8.16 brap-2 3123 7.556 0.962 0.945 0.947 0.945 0.932 0.951 0.938 0.936 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
57. T19B4.2 npp-7 13073 7.555 0.953 0.957 0.959 0.957 0.951 0.909 0.932 0.937 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
58. K11D12.2 pqn-51 15951 7.555 0.960 0.938 0.950 0.938 0.959 0.978 0.903 0.929 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
59. Y47G6A.20 rnp-6 5542 7.554 0.950 0.931 0.936 0.931 0.968 0.957 0.946 0.935 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
60. K03B4.2 K03B4.2 21796 7.552 0.946 0.950 0.929 0.950 0.966 0.920 0.946 0.945
61. C47D12.6 tars-1 23488 7.551 0.949 0.935 0.941 0.935 0.954 0.976 0.925 0.936 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
62. T27F2.1 skp-1 3532 7.55 0.955 0.969 0.928 0.969 0.924 0.924 0.943 0.938 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
63. C09G12.9 tsg-101 9451 7.55 0.946 0.934 0.926 0.934 0.954 0.962 0.966 0.928 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
64. R13F6.10 cra-1 11610 7.549 0.966 0.958 0.946 0.958 0.953 0.922 0.922 0.924 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
65. Y73E7A.2 Y73E7A.2 1599 7.547 0.970 0.934 0.879 0.934 0.973 0.983 0.932 0.942
66. F39B2.2 uev-1 13597 7.547 0.929 0.938 0.938 0.938 0.939 0.960 0.956 0.949 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
67. B0261.4 mrpl-47 8210 7.546 0.935 0.962 0.952 0.962 0.903 0.943 0.930 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
68. Y111B2A.11 epc-1 8915 7.545 0.947 0.954 0.922 0.954 0.978 0.963 0.918 0.909 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
69. F39H11.5 pbs-7 13631 7.545 0.947 0.954 0.937 0.954 0.943 0.961 0.931 0.918 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
70. Y73B6BL.6 sqd-1 41708 7.545 0.956 0.933 0.956 0.933 0.955 0.977 0.939 0.896 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
71. T16G1.11 eif-3.K 14014 7.544 0.962 0.950 0.944 0.950 0.938 0.942 0.931 0.927 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
72. Y61A9LA.8 sut-2 11388 7.544 0.965 0.951 0.926 0.951 0.965 0.949 0.900 0.937 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
73. F26D10.3 hsp-1 98277 7.544 0.945 0.933 0.938 0.933 0.952 0.969 0.932 0.942 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
74. T01G9.6 kin-10 27360 7.543 0.956 0.951 0.945 0.951 0.959 0.974 0.911 0.896 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
75. T12D8.2 drr-2 16208 7.543 0.951 0.944 0.964 0.944 0.952 0.933 0.946 0.909 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
76. W04D2.5 mrps-11 5757 7.54 0.964 0.924 0.970 0.924 0.962 0.930 0.942 0.924 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
77. ZK616.6 perm-3 16186 7.54 0.940 0.941 0.944 0.941 0.924 0.965 0.959 0.926 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
78. T17E9.2 nmt-1 8017 7.54 0.941 0.956 0.970 0.956 0.931 0.939 0.914 0.933 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
79. F56A8.6 cpf-2 2730 7.538 0.948 0.940 0.929 0.940 0.957 0.945 0.935 0.944 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
80. T09A5.7 T09A5.7 5907 7.538 0.909 0.963 0.956 0.963 0.953 0.938 0.911 0.945
81. T25D3.2 mrpl-28 4649 7.538 0.960 0.956 0.961 0.956 0.934 0.893 0.960 0.918 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
82. T01E8.6 mrps-14 9328 7.537 0.945 0.969 0.956 0.969 0.936 0.918 0.916 0.928 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
83. K08D12.1 pbs-1 21677 7.537 0.964 0.962 0.913 0.962 0.931 0.960 0.917 0.928 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
84. Y47D3A.29 Y47D3A.29 9472 7.535 0.934 0.956 0.910 0.956 0.949 0.987 0.937 0.906 DNA polymerase [Source:RefSeq peptide;Acc:NP_001255109]
85. Y38A8.2 pbs-3 18117 7.535 0.946 0.957 0.937 0.957 0.955 0.974 0.921 0.888 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
86. T10F2.1 gars-1 7204 7.534 0.965 0.948 0.936 0.948 0.954 0.954 0.916 0.913 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
87. F45H11.2 ned-8 13247 7.534 0.928 0.949 0.902 0.949 0.950 0.963 0.952 0.941 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
88. F56D1.7 daz-1 23684 7.533 0.974 0.959 0.950 0.959 0.955 0.892 0.918 0.926 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
89. F58G11.1 letm-1 13414 7.533 0.934 0.963 0.945 0.963 0.936 0.971 0.894 0.927 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
90. F28B3.8 imb-1 7515 7.533 0.952 0.953 0.925 0.953 0.933 0.933 0.927 0.957 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
91. ZC410.7 lpl-1 5101 7.533 0.947 0.948 0.914 0.948 0.951 0.933 0.939 0.953 LiPoate Ligase [Source:RefSeq peptide;Acc:NP_501580]
92. C08B11.5 sap-49 10553 7.531 0.956 0.957 0.943 0.957 0.947 0.921 0.937 0.913 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
93. W03F9.5 ttb-1 8682 7.531 0.949 0.957 0.938 0.957 0.941 0.941 0.917 0.931 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
94. Y110A7A.14 pas-3 6831 7.531 0.956 0.948 0.903 0.948 0.948 0.962 0.940 0.926 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
95. Y46G5A.4 snrp-200 13827 7.529 0.961 0.945 0.970 0.945 0.943 0.914 0.928 0.923 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
96. Y57E12AM.1 Y57E12AM.1 10510 7.528 0.955 0.928 0.897 0.928 0.960 0.972 0.951 0.937 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
97. W09C5.7 W09C5.7 2359 7.528 0.956 0.925 0.929 0.925 0.964 0.956 0.965 0.908
98. F33D11.11 vpr-1 18001 7.528 0.920 0.938 0.928 0.938 0.957 0.977 0.947 0.923 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
99. M7.1 let-70 85699 7.527 0.930 0.945 0.942 0.945 0.935 0.965 0.942 0.923 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
100. R09B3.5 mag-1 7496 7.527 0.945 0.962 0.949 0.962 0.927 0.951 0.903 0.928 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA