C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T11G6.1

Gene ID Gene Name Reads Transcripts Annotation
T11G6.1 hars-1 7908 T11G6.1a.1, T11G6.1a.2, T11G6.1b.1, T11G6.1b.2 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]

Genes with expression patterns similar to T11G6.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T11G6.1 hars-1 7908 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
2. F28H1.3 aars-2 13537 7.78 0.968 0.968 0.978 0.968 0.983 0.985 0.965 0.965 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
3. T08B2.9 fars-1 12650 7.772 0.973 0.977 0.980 0.977 0.951 0.978 0.965 0.971 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
4. F58D5.1 hrp-2 17211 7.754 0.967 0.980 0.965 0.980 0.985 0.961 0.970 0.946 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
5. K08F11.3 cif-1 10218 7.751 0.973 0.971 0.967 0.971 0.983 0.966 0.958 0.962 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
6. D2013.7 eif-3.F 21004 7.75 0.967 0.975 0.974 0.975 0.978 0.985 0.939 0.957 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
7. F22D6.3 nars-1 18624 7.746 0.977 0.986 0.962 0.986 0.985 0.979 0.922 0.949 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
8. Y40B1B.5 eif-3.J 15061 7.746 0.965 0.978 0.977 0.978 0.968 0.969 0.943 0.968 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
9. H21P03.1 mbf-1 25586 7.745 0.966 0.982 0.968 0.982 0.973 0.970 0.948 0.956 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
10. T05H4.6 erfa-1 12542 7.742 0.969 0.982 0.967 0.982 0.972 0.961 0.944 0.965 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
11. T16G1.11 eif-3.K 14014 7.741 0.975 0.970 0.983 0.970 0.974 0.979 0.966 0.924 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
12. W08E3.3 ola-1 20885 7.737 0.964 0.960 0.978 0.960 0.976 0.977 0.959 0.963 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
13. T10B5.5 cct-7 24616 7.736 0.957 0.984 0.968 0.984 0.968 0.971 0.945 0.959 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
14. H19N07.1 erfa-3 19869 7.735 0.959 0.985 0.981 0.985 0.974 0.974 0.914 0.963 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
15. F22B5.9 fars-3 7209 7.731 0.960 0.975 0.971 0.975 0.984 0.975 0.948 0.943 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
16. F17C11.9 eef-1G 37911 7.726 0.953 0.966 0.947 0.966 0.990 0.968 0.976 0.960 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
17. T17E9.2 nmt-1 8017 7.718 0.966 0.979 0.975 0.979 0.982 0.950 0.930 0.957 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
18. F56D2.6 ddx-15 12282 7.717 0.945 0.976 0.969 0.976 0.973 0.967 0.952 0.959 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
19. K08F4.2 gtbp-1 25222 7.716 0.986 0.980 0.977 0.980 0.941 0.967 0.919 0.966 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
20. F42A6.7 hrp-1 28201 7.714 0.967 0.946 0.973 0.946 0.986 0.970 0.978 0.948 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
21. B0261.4 mrpl-47 8210 7.708 0.956 0.957 0.963 0.957 0.979 0.992 0.973 0.931 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
22. C15H11.4 dhs-22 21674 7.702 0.966 0.966 0.965 0.966 0.967 0.965 0.940 0.967 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
23. F26F4.10 rars-1 9971 7.698 0.966 0.964 0.975 0.964 0.977 0.965 0.932 0.955 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
24. F25H5.4 eef-2 34846 7.695 0.960 0.956 0.931 0.956 0.977 0.977 0.971 0.967 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
25. T01E8.6 mrps-14 9328 7.691 0.974 0.968 0.972 0.968 0.971 0.957 0.941 0.940 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
26. T02G5.9 kars-1 9763 7.69 0.963 0.977 0.965 0.977 0.968 0.962 0.945 0.933 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
27. F58E10.3 ddx-17 15107 7.69 0.966 0.981 0.965 0.981 0.968 0.959 0.923 0.947 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
28. B0464.1 dars-1 12331 7.688 0.960 0.957 0.972 0.957 0.991 0.957 0.950 0.944 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
29. F08F8.3 kap-1 31437 7.686 0.982 0.960 0.961 0.960 0.954 0.947 0.960 0.962 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
30. ZK1058.4 ccdc-47 8879 7.685 0.967 0.961 0.974 0.961 0.964 0.969 0.954 0.935 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
31. B0205.11 mrpl-9 9162 7.685 0.970 0.974 0.975 0.974 0.966 0.946 0.946 0.934 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
32. F29C4.6 tut-1 5637 7.683 0.961 0.973 0.970 0.973 0.973 0.932 0.937 0.964 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
33. C09D4.5 rpl-19 56944 7.683 0.945 0.957 0.959 0.957 0.974 0.976 0.969 0.946 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
34. T23H2.1 npp-12 12425 7.683 0.954 0.962 0.965 0.962 0.975 0.967 0.964 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
35. C25D7.8 otub-1 7941 7.682 0.980 0.966 0.953 0.966 0.971 0.952 0.925 0.969 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
36. C26D10.2 hel-1 28697 7.682 0.956 0.970 0.975 0.970 0.979 0.956 0.944 0.932 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
37. K01G5.4 ran-1 32379 7.678 0.954 0.962 0.949 0.962 0.976 0.976 0.973 0.926 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
38. C33H5.12 rsp-6 23342 7.678 0.944 0.960 0.964 0.960 0.982 0.976 0.954 0.938 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
39. F58B3.5 mars-1 6729 7.677 0.973 0.976 0.964 0.976 0.945 0.965 0.950 0.928 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
40. C34E10.5 prmt-5 12277 7.677 0.952 0.982 0.971 0.982 0.971 0.955 0.940 0.924 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
41. R13F6.10 cra-1 11610 7.675 0.950 0.964 0.986 0.964 0.985 0.963 0.936 0.927 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
42. Y116A8C.42 snr-1 17062 7.675 0.972 0.980 0.961 0.980 0.940 0.962 0.944 0.936 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
43. F13G3.4 dylt-1 21345 7.674 0.950 0.973 0.977 0.973 0.970 0.966 0.915 0.950 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
44. T25G3.4 T25G3.4 9394 7.67 0.975 0.965 0.978 0.965 0.924 0.977 0.938 0.948 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
45. ZK742.1 xpo-1 20741 7.669 0.919 0.958 0.974 0.958 0.965 0.968 0.951 0.976 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
46. ZK616.6 perm-3 16186 7.668 0.969 0.968 0.970 0.968 0.976 0.962 0.926 0.929 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
47. T04A8.11 mrpl-16 5998 7.666 0.944 0.979 0.964 0.979 0.972 0.958 0.911 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
48. K04D7.2 mspn-1 48187 7.665 0.961 0.946 0.956 0.946 0.957 0.969 0.970 0.960 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
49. Y62E10A.11 mdt-9 5971 7.664 0.968 0.962 0.966 0.962 0.940 0.975 0.952 0.939 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
50. C18A3.5 tiar-1 25400 7.663 0.957 0.961 0.967 0.961 0.966 0.969 0.930 0.952 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
51. F32H2.1 snpc-4 7581 7.663 0.953 0.959 0.938 0.959 0.974 0.967 0.960 0.953 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
52. C08B11.5 sap-49 10553 7.662 0.983 0.951 0.970 0.951 0.979 0.961 0.943 0.924 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
53. T21B10.1 mrpl-50 14595 7.662 0.974 0.982 0.978 0.982 0.911 0.975 0.915 0.945 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
54. Y34D9A.1 mrpl-38 5291 7.662 0.969 0.959 0.954 0.959 0.979 0.972 0.940 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
55. K07A12.7 mrps-15 6325 7.662 0.938 0.975 0.935 0.975 0.974 0.973 0.953 0.939 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
56. ZK863.6 dpy-30 16177 7.661 0.956 0.963 0.973 0.963 0.950 0.962 0.934 0.960 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
57. F54A3.3 cct-3 25183 7.661 0.967 0.965 0.965 0.965 0.953 0.974 0.920 0.952 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
58. C26E6.4 rpb-2 7053 7.66 0.942 0.976 0.967 0.976 0.978 0.965 0.949 0.907 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
59. Y17G7A.1 hmg-12 29989 7.658 0.974 0.976 0.965 0.976 0.959 0.946 0.949 0.913 HMG [Source:RefSeq peptide;Acc:NP_496544]
60. T28D9.10 snr-3 9995 7.658 0.971 0.983 0.960 0.983 0.941 0.962 0.907 0.951 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
61. T19B4.2 npp-7 13073 7.657 0.963 0.951 0.960 0.951 0.979 0.925 0.958 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
62. C06A1.5 rpb-6 7515 7.657 0.964 0.969 0.969 0.969 0.946 0.959 0.959 0.922 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
63. C56C10.8 icd-1 89788 7.656 0.955 0.967 0.931 0.967 0.950 0.965 0.964 0.957 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
64. T05C12.7 cct-1 41264 7.653 0.982 0.975 0.972 0.975 0.929 0.972 0.921 0.927 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
65. F33D4.5 mrpl-1 5337 7.653 0.959 0.966 0.967 0.966 0.939 0.948 0.940 0.968 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
66. C50C3.6 prp-8 19582 7.652 0.970 0.985 0.960 0.985 0.962 0.941 0.903 0.946 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
67. C47D12.6 tars-1 23488 7.652 0.961 0.964 0.970 0.964 0.976 0.975 0.878 0.964 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
68. T10F2.4 prp-19 11298 7.649 0.965 0.965 0.962 0.965 0.984 0.925 0.932 0.951 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
69. Y111B2A.18 rsp-3 43731 7.648 0.969 0.940 0.964 0.940 0.973 0.981 0.937 0.944 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
70. Y37E3.9 phb-1 29211 7.647 0.941 0.953 0.937 0.953 0.968 0.980 0.950 0.965 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
71. T06A10.4 lsy-13 7631 7.646 0.976 0.958 0.978 0.958 0.991 0.945 0.940 0.900
72. Y65B4BR.5 icd-2 58321 7.646 0.960 0.972 0.976 0.972 0.946 0.966 0.929 0.925 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
73. K04D7.1 rack-1 48949 7.643 0.943 0.953 0.953 0.953 0.953 0.957 0.977 0.954 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
74. T24H7.1 phb-2 28775 7.642 0.966 0.957 0.915 0.957 0.979 0.965 0.945 0.958 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
75. C18D11.4 rsp-8 18308 7.639 0.962 0.958 0.964 0.958 0.971 0.937 0.923 0.966 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
76. C08F8.1 pfd-1 10199 7.638 0.949 0.968 0.952 0.968 0.929 0.975 0.958 0.939 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
77. K11D12.2 pqn-51 15951 7.638 0.963 0.961 0.961 0.961 0.968 0.975 0.916 0.933 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
78. T20H4.3 pars-1 8167 7.637 0.966 0.985 0.947 0.985 0.928 0.948 0.920 0.958 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
79. Y54E5A.4 npp-4 6288 7.637 0.972 0.958 0.960 0.958 0.969 0.938 0.931 0.951 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
80. R144.7 larp-1 24669 7.636 0.940 0.965 0.936 0.965 0.958 0.956 0.951 0.965 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
81. ZK652.1 snr-5 5993 7.635 0.939 0.975 0.972 0.975 0.984 0.965 0.895 0.930 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
82. C27B7.5 C27B7.5 6331 7.635 0.953 0.976 0.954 0.976 0.968 0.972 0.931 0.905
83. Y39A1C.3 cey-4 50694 7.632 0.967 0.953 0.948 0.953 0.955 0.973 0.937 0.946 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
84. T12D8.8 hip-1 18283 7.631 0.957 0.945 0.959 0.945 0.963 0.959 0.947 0.956 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
85. T27F7.3 eif-1 28176 7.631 0.956 0.960 0.972 0.960 0.954 0.941 0.932 0.956 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
86. B0464.7 baf-1 10161 7.629 0.964 0.950 0.921 0.950 0.976 0.973 0.972 0.923 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
87. F32A5.7 lsm-4 3785 7.629 0.959 0.937 0.954 0.937 0.973 0.973 0.953 0.943 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
88. C53D5.6 imb-3 28921 7.628 0.969 0.979 0.964 0.979 0.958 0.924 0.942 0.913 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
89. F54H12.6 eef-1B.1 37095 7.627 0.962 0.949 0.921 0.949 0.979 0.953 0.971 0.943 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
90. B0511.8 mrps-30 5050 7.627 0.940 0.957 0.967 0.957 0.977 0.969 0.964 0.896 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
91. B0035.3 B0035.3 4118 7.626 0.945 0.949 0.955 0.949 0.975 0.955 0.953 0.945
92. Y39G10AR.9 Y39G10AR.9 3972 7.623 0.961 0.942 0.952 0.942 0.975 0.971 0.921 0.959
93. T23D8.4 eif-3.C 15343 7.623 0.951 0.989 0.980 0.989 0.963 0.944 0.887 0.920 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
94. B0336.9 swp-1 52442 7.622 0.943 0.946 0.951 0.946 0.956 0.979 0.965 0.936 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
95. B0303.15 mrpl-11 9889 7.621 0.971 0.954 0.970 0.954 0.953 0.948 0.932 0.939 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
96. Y53C12B.3 nos-3 20231 7.621 0.962 0.977 0.956 0.977 0.933 0.934 0.947 0.935 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
97. Y73B6BL.6 sqd-1 41708 7.621 0.977 0.969 0.969 0.969 0.950 0.943 0.913 0.931 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
98. T03F6.5 lis-1 8818 7.62 0.957 0.962 0.946 0.962 0.970 0.939 0.920 0.964 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
99. Y38A8.3 ulp-2 7403 7.619 0.952 0.958 0.968 0.958 0.983 0.940 0.932 0.928 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
100. C39E9.14 dli-1 5650 7.617 0.941 0.955 0.972 0.955 0.973 0.939 0.909 0.973 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]

There are 2296 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA