C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F21C3.4

Gene ID Gene Name Reads Transcripts Annotation
F21C3.4 rde-2 6286 F21C3.4a, F21C3.4b

Genes with expression patterns similar to F21C3.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F21C3.4 rde-2 6286 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. K08F4.2 gtbp-1 25222 7.758 0.959 0.965 0.974 0.965 0.975 0.991 0.963 0.966 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
3. Y116A8C.42 snr-1 17062 7.757 0.976 0.976 0.974 0.976 0.957 0.976 0.967 0.955 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. B0035.12 sart-3 7188 7.748 0.967 0.972 0.976 0.972 0.981 0.984 0.978 0.918 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
5. Y53C12B.3 nos-3 20231 7.741 0.966 0.980 0.962 0.980 0.959 0.965 0.965 0.964 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
6. K07A1.12 lin-53 15817 7.739 0.902 0.985 0.964 0.985 0.981 0.976 0.968 0.978 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
7. F01F1.8 cct-6 29460 7.733 0.938 0.965 0.967 0.965 0.975 0.986 0.965 0.972 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
8. ZK1128.6 ttll-4 6059 7.731 0.932 0.984 0.962 0.984 0.979 0.987 0.930 0.973 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
9. F59A2.1 npp-9 34375 7.73 0.949 0.973 0.965 0.973 0.971 0.984 0.967 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
10. F09G2.9 attf-2 14771 7.728 0.936 0.986 0.978 0.986 0.958 0.975 0.946 0.963 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
11. F53F4.12 F53F4.12 2683 7.723 0.976 0.972 0.950 0.972 0.963 0.990 0.960 0.940
12. Y23H5B.6 Y23H5B.6 5886 7.72 0.953 0.969 0.974 0.969 0.958 0.986 0.948 0.963
13. Y14H12B.2 Y14H12B.2 6496 7.717 0.944 0.972 0.980 0.972 0.964 0.975 0.950 0.960
14. Y54E5A.6 Y54E5A.6 770 7.717 0.971 0.952 0.963 0.952 0.973 0.987 0.947 0.972
15. F14B4.3 rpoa-2 7549 7.71 0.921 0.969 0.962 0.969 0.986 0.986 0.975 0.942 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
16. T28D9.10 snr-3 9995 7.71 0.966 0.973 0.945 0.973 0.962 0.994 0.955 0.942 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
17. R07E5.14 rnp-4 11659 7.709 0.926 0.976 0.963 0.976 0.962 0.977 0.963 0.966 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
18. K01G5.4 ran-1 32379 7.709 0.928 0.984 0.967 0.984 0.942 0.975 0.971 0.958 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
19. K01G5.2 hpl-2 6781 7.709 0.933 0.976 0.966 0.976 0.978 0.976 0.960 0.944 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
20. W06E11.4 sbds-1 6701 7.708 0.951 0.968 0.969 0.968 0.961 0.987 0.936 0.968 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
21. Y71F9B.4 snr-7 13542 7.707 0.974 0.952 0.943 0.952 0.980 0.988 0.942 0.976 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
22. C49H3.10 xpo-3 9101 7.705 0.939 0.970 0.972 0.970 0.972 0.982 0.948 0.952 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
23. Y40B1B.8 Y40B1B.8 4877 7.705 0.968 0.957 0.958 0.957 0.970 0.986 0.955 0.954
24. T21B10.1 mrpl-50 14595 7.704 0.963 0.966 0.970 0.966 0.959 0.989 0.943 0.948 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
25. C05C8.5 C05C8.5 2655 7.703 0.948 0.970 0.950 0.970 0.969 0.980 0.965 0.951
26. C34E10.2 gop-2 5684 7.701 0.954 0.981 0.970 0.981 0.963 0.981 0.934 0.937 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
27. F43G9.5 cfim-1 9169 7.701 0.924 0.982 0.962 0.982 0.972 0.966 0.949 0.964 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
28. C08F8.1 pfd-1 10199 7.7 0.938 0.966 0.947 0.966 0.979 0.966 0.966 0.972 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
29. Y37D8A.11 cec-7 8801 7.699 0.945 0.987 0.980 0.987 0.974 0.980 0.969 0.877 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
30. Y71G12B.9 lin-65 7476 7.697 0.922 0.978 0.980 0.978 0.982 0.976 0.943 0.938 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
31. C06A1.5 rpb-6 7515 7.696 0.954 0.942 0.977 0.942 0.968 0.982 0.961 0.970 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
32. Y62E10A.11 mdt-9 5971 7.695 0.967 0.982 0.960 0.982 0.936 0.979 0.933 0.956 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
33. F32H2.1 snpc-4 7581 7.694 0.958 0.975 0.960 0.975 0.941 0.983 0.951 0.951 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
34. F58E10.3 ddx-17 15107 7.692 0.939 0.978 0.979 0.978 0.946 0.976 0.943 0.953 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
35. Y55F3AM.12 dcap-1 8679 7.692 0.925 0.991 0.970 0.991 0.973 0.971 0.957 0.914 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
36. T25G3.4 T25G3.4 9394 7.689 0.958 0.969 0.965 0.969 0.981 0.977 0.971 0.899 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
37. R06A4.4 imb-2 10302 7.684 0.920 0.971 0.956 0.971 0.964 0.962 0.957 0.983 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
38. C07H6.5 cgh-1 60576 7.684 0.933 0.954 0.969 0.954 0.965 0.970 0.977 0.962 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
39. Y37D8A.9 mrg-1 14369 7.683 0.915 0.979 0.943 0.979 0.973 0.987 0.952 0.955 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
40. C01F6.8 icln-1 6586 7.682 0.949 0.974 0.964 0.974 0.949 0.981 0.960 0.931 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
41. D2023.5 mpst-1 10328 7.681 0.949 0.959 0.957 0.959 0.967 0.969 0.962 0.959 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
42. F23F1.1 nfyc-1 9983 7.681 0.936 0.975 0.968 0.975 0.986 0.981 0.946 0.914 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
43. K01G5.8 K01G5.8 4694 7.678 0.946 0.962 0.962 0.962 0.964 0.984 0.962 0.936
44. C48B6.3 C48B6.3 6610 7.676 0.948 0.972 0.966 0.972 0.956 0.958 0.959 0.945
45. B0261.4 mrpl-47 8210 7.676 0.953 0.960 0.954 0.960 0.934 0.971 0.960 0.984 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
46. T28D9.2 rsp-5 6460 7.675 0.947 0.962 0.974 0.962 0.969 0.980 0.951 0.930 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
47. F41G3.14 exos-8 2300 7.673 0.957 0.956 0.942 0.956 0.975 0.977 0.962 0.948 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
48. Y41D4B.19 npp-8 12992 7.672 0.908 0.978 0.983 0.978 0.977 0.970 0.968 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
49. C26B2.6 elpc-4 3600 7.672 0.943 0.979 0.941 0.979 0.970 0.968 0.935 0.957 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
50. M01E11.5 cey-3 20931 7.667 0.949 0.979 0.975 0.979 0.957 0.960 0.955 0.913 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
51. T21B10.7 cct-2 13999 7.666 0.953 0.947 0.962 0.947 0.979 0.984 0.926 0.968 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
52. F53A2.4 nud-1 7818 7.663 0.951 0.962 0.984 0.962 0.966 0.983 0.934 0.921 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
53. Y39G10AR.7 ekl-7 7072 7.662 0.945 0.978 0.963 0.978 0.944 0.971 0.954 0.929
54. K04C2.3 K04C2.3 23540 7.66 0.934 0.955 0.947 0.955 0.982 0.981 0.951 0.955
55. Y47D3A.26 smc-3 6256 7.657 0.902 0.974 0.974 0.974 0.980 0.972 0.941 0.940 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
56. C18E9.3 szy-20 6819 7.657 0.958 0.973 0.983 0.973 0.971 0.966 0.938 0.895 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
57. C04G2.6 dis-3 5048 7.656 0.926 0.968 0.958 0.968 0.964 0.990 0.969 0.913 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
58. B0513.2 B0513.2 3641 7.656 0.955 0.951 0.954 0.951 0.957 0.981 0.962 0.945
59. F42A6.7 hrp-1 28201 7.654 0.933 0.977 0.972 0.977 0.937 0.959 0.940 0.959 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
60. Y62E10A.12 lsm-3 4322 7.654 0.926 0.941 0.967 0.941 0.974 0.988 0.941 0.976 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
61. H27M09.2 rpb-5 4744 7.652 0.942 0.962 0.947 0.962 0.965 0.969 0.953 0.952 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
62. T01E8.6 mrps-14 9328 7.65 0.962 0.969 0.947 0.969 0.940 0.978 0.920 0.965 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
63. C48B4.11 C48B4.11 4384 7.65 0.973 0.980 0.964 0.980 0.937 0.953 0.943 0.920
64. Y55F3AR.3 cct-8 17979 7.649 0.959 0.924 0.962 0.924 0.971 0.988 0.953 0.968 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
65. F56F3.1 ifet-1 25772 7.649 0.920 0.977 0.972 0.977 0.964 0.952 0.924 0.963 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
66. F33D4.5 mrpl-1 5337 7.648 0.955 0.975 0.970 0.975 0.980 0.949 0.875 0.969 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
67. C26E6.4 rpb-2 7053 7.648 0.951 0.975 0.954 0.975 0.946 0.979 0.920 0.948 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
68. W08E3.1 snr-2 14849 7.648 0.934 0.957 0.975 0.957 0.939 0.971 0.941 0.974 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
69. K01G5.1 rnf-113 4336 7.647 0.936 0.969 0.953 0.969 0.970 0.971 0.937 0.942 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
70. T19B4.2 npp-7 13073 7.647 0.931 0.982 0.956 0.982 0.940 0.947 0.966 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
71. ZK1251.9 dcaf-1 10926 7.646 0.900 0.984 0.955 0.984 0.974 0.960 0.958 0.931 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
72. B0205.9 B0205.9 3651 7.646 0.961 0.981 0.946 0.981 0.926 0.944 0.972 0.935
73. T05C12.7 cct-1 41264 7.646 0.928 0.979 0.973 0.979 0.954 0.924 0.952 0.957 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
74. Y40G12A.1 ubh-3 4142 7.646 0.938 0.964 0.958 0.964 0.943 0.973 0.951 0.955 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
75. T23G11.3 gld-1 41748 7.645 0.951 0.977 0.974 0.977 0.946 0.956 0.952 0.912 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
76. F32A5.7 lsm-4 3785 7.645 0.933 0.969 0.964 0.969 0.961 0.979 0.939 0.931 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
77. C30G12.7 puf-8 5785 7.645 0.928 0.983 0.974 0.983 0.948 0.965 0.958 0.906 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
78. ZK863.6 dpy-30 16177 7.644 0.906 0.981 0.975 0.981 0.955 0.932 0.949 0.965 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
79. F09F7.3 rpc-2 9751 7.643 0.937 0.939 0.953 0.939 0.981 0.984 0.976 0.934 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
80. C23G10.8 C23G10.8 4642 7.642 0.934 0.981 0.967 0.981 0.945 0.939 0.971 0.924
81. T10B5.5 cct-7 24616 7.641 0.955 0.959 0.949 0.959 0.954 0.950 0.936 0.979 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
82. T08B2.9 fars-1 12650 7.641 0.964 0.966 0.951 0.966 0.951 0.956 0.937 0.950 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
83. T23H2.1 npp-12 12425 7.641 0.930 0.978 0.977 0.978 0.936 0.983 0.919 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
84. C34D4.12 cyn-12 7363 7.641 0.924 0.966 0.965 0.966 0.980 0.979 0.933 0.928 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
85. W06H3.3 ctps-1 8363 7.638 0.953 0.951 0.949 0.951 0.958 0.980 0.929 0.967 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
86. F56D2.6 ddx-15 12282 7.637 0.928 0.976 0.970 0.976 0.941 0.978 0.905 0.963 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
87. R09B3.5 mag-1 7496 7.637 0.946 0.940 0.972 0.940 0.965 0.973 0.945 0.956 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
88. T07A9.10 T07A9.10 2400 7.636 0.919 0.960 0.944 0.960 0.955 0.975 0.970 0.953
89. Y111B2A.17 elpc-2 3504 7.635 0.937 0.967 0.952 0.967 0.957 0.966 0.967 0.922 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
90. C26D10.1 ran-3 11111 7.634 0.903 0.973 0.974 0.973 0.927 0.984 0.952 0.948 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
91. C14A4.14 mrps-22 7966 7.634 0.937 0.970 0.949 0.970 0.915 0.975 0.952 0.966 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
92. T03D8.2 mrps-12 8253 7.633 0.949 0.936 0.934 0.936 0.981 0.971 0.966 0.960 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
93. Y92H12BR.8 mrpl-15 6344 7.632 0.958 0.945 0.921 0.945 0.982 0.976 0.943 0.962 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
94. C08B11.5 sap-49 10553 7.632 0.941 0.982 0.970 0.982 0.949 0.964 0.914 0.930 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
95. T05H4.11 T05H4.11 12835 7.631 0.910 0.968 0.974 0.968 0.970 0.963 0.931 0.947
96. R09B3.1 exo-3 4401 7.631 0.969 0.967 0.977 0.967 0.938 0.957 0.950 0.906 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
97. ZK856.10 rpc-25 3282 7.63 0.937 0.962 0.949 0.962 0.924 0.964 0.952 0.980 RNA Polymerase, Class III (C) [Source:RefSeq peptide;Acc:NP_505625]
98. Y37E3.3 rpb-10 4051 7.629 0.966 0.947 0.933 0.947 0.958 0.972 0.946 0.960 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
99. Y73B6BL.32 lsm-8 11002 7.628 0.948 0.970 0.980 0.970 0.964 0.929 0.919 0.948 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
100. Y43F4B.3 set-25 8036 7.628 0.904 0.979 0.941 0.979 0.988 0.984 0.918 0.935 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]

There are 3133 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA