C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F18A1.3

Gene ID Gene Name Reads Transcripts Annotation
F18A1.3 lir-1 2995 F18A1.3a, F18A1.3b, F18A1.3c, F18A1.3d, F18A1.3e, F18A1.3f, F18A1.3g, F18A1.3h, F18A1.3i, F18A1.3j, F18A1.3k, F18A1.3l, F18A1.3m, F18A1.3n LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]

Genes with expression patterns similar to F18A1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F18A1.3 lir-1 2995 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
2. T05H4.14 gad-1 7979 7.684 0.942 0.977 0.963 0.977 0.972 0.944 0.951 0.958 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
3. T19B4.2 npp-7 13073 7.675 0.929 0.963 0.945 0.963 0.979 0.963 0.961 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
4. T10C6.4 srx-44 8454 7.661 0.952 0.967 0.962 0.967 0.968 0.972 0.918 0.955 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
5. T04A8.10 sel-13 3109 7.658 0.949 0.971 0.958 0.971 0.970 0.962 0.941 0.936 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
6. T18H9.6 mdt-27 5418 7.656 0.946 0.983 0.954 0.983 0.959 0.965 0.930 0.936 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
7. ZK1127.4 ZK1127.4 3088 7.646 0.945 0.964 0.941 0.964 0.985 0.959 0.929 0.959 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
8. ZC395.8 ztf-8 5521 7.639 0.923 0.978 0.962 0.978 0.972 0.937 0.930 0.959 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
9. R12C12.2 ran-5 14517 7.636 0.944 0.950 0.953 0.950 0.960 0.958 0.960 0.961 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
10. F56F3.1 ifet-1 25772 7.635 0.896 0.970 0.934 0.970 0.979 0.963 0.950 0.973 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
11. F32H2.4 thoc-3 3861 7.629 0.957 0.955 0.944 0.955 0.984 0.969 0.905 0.960 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
12. B0035.3 B0035.3 4118 7.629 0.956 0.944 0.944 0.944 0.970 0.968 0.952 0.951
13. C27B7.1 spr-2 14958 7.628 0.933 0.964 0.965 0.964 0.971 0.969 0.906 0.956 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
14. Y54E2A.3 tac-1 6308 7.626 0.955 0.960 0.898 0.960 0.989 0.963 0.935 0.966 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
15. F25B3.1 ehbp-1 6409 7.625 0.951 0.958 0.947 0.958 0.964 0.955 0.937 0.955 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
16. C05C8.6 hpo-9 8263 7.625 0.955 0.975 0.953 0.975 0.965 0.959 0.926 0.917
17. C52E4.6 cyl-1 6405 7.623 0.919 0.970 0.964 0.970 0.972 0.958 0.917 0.953 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
18. C48E7.3 lpd-2 10330 7.617 0.928 0.980 0.937 0.980 0.972 0.927 0.949 0.944 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
19. K11D12.2 pqn-51 15951 7.617 0.948 0.965 0.937 0.965 0.986 0.938 0.934 0.944 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
20. F56D1.7 daz-1 23684 7.617 0.929 0.966 0.949 0.966 0.983 0.931 0.939 0.954 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
21. C36B1.8 gls-1 8617 7.617 0.920 0.971 0.960 0.971 0.972 0.943 0.910 0.970 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
22. Y54E5A.4 npp-4 6288 7.614 0.934 0.953 0.940 0.953 0.974 0.960 0.934 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
23. C02B10.2 snpn-1 5519 7.614 0.941 0.955 0.950 0.955 0.960 0.963 0.929 0.961 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
24. C02B10.5 C02B10.5 9171 7.613 0.960 0.939 0.955 0.939 0.953 0.946 0.954 0.967
25. F33H1.4 F33H1.4 2447 7.611 0.941 0.975 0.959 0.975 0.960 0.953 0.938 0.910
26. W01G7.3 rpb-11 7826 7.607 0.963 0.957 0.947 0.957 0.962 0.942 0.948 0.931 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
27. T25G3.3 T25G3.3 7285 7.607 0.947 0.966 0.910 0.966 0.965 0.945 0.965 0.943
28. ZK686.4 snu-23 9040 7.606 0.927 0.968 0.949 0.968 0.977 0.951 0.911 0.955 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
29. F52C9.7 mog-3 9880 7.606 0.938 0.961 0.952 0.961 0.966 0.940 0.945 0.943 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
30. C26E6.5 fsn-1 6615 7.605 0.969 0.958 0.959 0.958 0.976 0.949 0.904 0.932 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
31. C17E4.10 C17E4.10 7034 7.605 0.906 0.975 0.955 0.975 0.968 0.954 0.924 0.948
32. T12D8.3 acbp-5 6816 7.604 0.914 0.965 0.922 0.965 0.971 0.954 0.942 0.971 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
33. Y73F8A.34 tag-349 7966 7.602 0.965 0.952 0.947 0.952 0.975 0.948 0.911 0.952
34. Y38A8.3 ulp-2 7403 7.599 0.934 0.976 0.940 0.976 0.981 0.942 0.910 0.940 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
35. K12D12.2 npp-3 6914 7.598 0.917 0.967 0.951 0.967 0.963 0.937 0.924 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
36. R119.4 pqn-59 16065 7.598 0.894 0.966 0.965 0.966 0.972 0.940 0.924 0.971 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
37. C25D7.8 otub-1 7941 7.597 0.940 0.963 0.931 0.963 0.975 0.944 0.914 0.967 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
38. F23F1.1 nfyc-1 9983 7.596 0.929 0.964 0.940 0.964 0.965 0.910 0.963 0.961 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
39. Y110A7A.8 prp-31 4436 7.595 0.967 0.955 0.910 0.955 0.974 0.972 0.914 0.948 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
40. F18E2.3 scc-3 13464 7.592 0.949 0.967 0.967 0.967 0.954 0.935 0.893 0.960 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
41. R05D11.7 snrp-27 4159 7.591 0.921 0.974 0.952 0.974 0.971 0.910 0.907 0.982 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
42. Y43F4B.4 npp-18 4780 7.589 0.945 0.954 0.945 0.954 0.966 0.923 0.945 0.957 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
43. F46B6.3 smg-4 4959 7.587 0.924 0.975 0.922 0.975 0.969 0.948 0.900 0.974 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
44. T13F2.7 sna-2 4771 7.586 0.852 0.988 0.960 0.988 0.973 0.949 0.915 0.961 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
45. C24G6.1 syp-2 2843 7.585 0.944 0.963 0.918 0.963 0.981 0.936 0.938 0.942
46. F36A2.1 cids-2 4551 7.585 0.909 0.969 0.911 0.969 0.964 0.946 0.965 0.952 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
47. K08E3.8 mdt-29 4678 7.585 0.922 0.957 0.928 0.957 0.974 0.962 0.957 0.928 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
48. Y65B4BL.2 deps-1 18277 7.584 0.939 0.965 0.948 0.965 0.971 0.944 0.913 0.939
49. T21B10.4 T21B10.4 11648 7.584 0.967 0.949 0.936 0.949 0.981 0.970 0.904 0.928
50. ZK856.12 hpo-40 7855 7.583 0.932 0.977 0.957 0.977 0.975 0.935 0.949 0.881
51. F41H10.4 F41H10.4 3295 7.583 0.934 0.955 0.939 0.955 0.985 0.935 0.954 0.926
52. D1054.14 prp-38 6504 7.582 0.956 0.961 0.959 0.961 0.965 0.945 0.884 0.951 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
53. T04A8.14 emb-5 11746 7.582 0.929 0.959 0.965 0.959 0.973 0.959 0.898 0.940 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
54. C53A5.3 hda-1 18413 7.582 0.946 0.966 0.950 0.966 0.977 0.911 0.927 0.939 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
55. R02D3.5 fnta-1 5258 7.581 0.950 0.963 0.960 0.963 0.967 0.980 0.868 0.930 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
56. F28B3.7 him-1 18274 7.58 0.928 0.950 0.965 0.950 0.983 0.950 0.931 0.923 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
57. T06A10.4 lsy-13 7631 7.58 0.885 0.971 0.927 0.971 0.977 0.950 0.960 0.939
58. ZK177.8 ZK177.8 3403 7.579 0.954 0.948 0.959 0.948 0.966 0.951 0.955 0.898
59. Y56A3A.17 npp-16 5391 7.578 0.930 0.972 0.954 0.972 0.975 0.920 0.912 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
60. C28H8.9 dpff-1 8684 7.577 0.970 0.977 0.934 0.977 0.967 0.941 0.873 0.938 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
61. T21D12.3 pqbp-1.1 5755 7.577 0.920 0.949 0.943 0.949 0.972 0.955 0.956 0.933 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
62. K03B4.2 K03B4.2 21796 7.575 0.925 0.972 0.897 0.972 0.952 0.932 0.967 0.958
63. Y47G6A.20 rnp-6 5542 7.575 0.930 0.959 0.939 0.959 0.970 0.940 0.900 0.978 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
64. F32H2.1 snpc-4 7581 7.575 0.936 0.962 0.917 0.962 0.961 0.899 0.976 0.962 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
65. K02F3.11 rnp-5 6205 7.575 0.941 0.943 0.951 0.943 0.972 0.936 0.933 0.956 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
66. F22D6.3 nars-1 18624 7.573 0.930 0.969 0.913 0.969 0.977 0.929 0.919 0.967 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
67. T10F2.4 prp-19 11298 7.573 0.928 0.955 0.919 0.955 0.985 0.949 0.916 0.966 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
68. C37A2.2 pqn-20 10913 7.572 0.923 0.955 0.956 0.955 0.950 0.954 0.946 0.933 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
69. F32E10.6 cec-5 10643 7.571 0.923 0.950 0.949 0.950 0.981 0.938 0.929 0.951 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
70. K01G5.4 ran-1 32379 7.567 0.941 0.956 0.903 0.956 0.967 0.916 0.963 0.965 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
71. Y102A5A.1 cand-1 11808 7.565 0.915 0.962 0.934 0.962 0.965 0.937 0.935 0.955 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
72. C46A5.9 hcf-1 6295 7.565 0.937 0.980 0.935 0.980 0.953 0.923 0.944 0.913 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
73. ZK1320.12 taf-8 3558 7.564 0.948 0.961 0.945 0.961 0.959 0.898 0.957 0.935 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
74. T20G5.11 rde-4 3966 7.564 0.947 0.938 0.939 0.938 0.971 0.949 0.923 0.959 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
75. T20B12.2 tbp-1 9014 7.563 0.953 0.959 0.954 0.959 0.964 0.948 0.890 0.936 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
76. C08B11.3 swsn-7 11608 7.562 0.917 0.965 0.949 0.965 0.960 0.934 0.941 0.931 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
77. F25B3.6 rtfo-1 11965 7.561 0.900 0.964 0.935 0.964 0.973 0.961 0.968 0.896 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
78. Y113G7B.23 swsn-1 13766 7.56 0.945 0.949 0.950 0.949 0.945 0.945 0.905 0.972 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
79. F33D4.7 emc-6 6534 7.56 0.946 0.959 0.922 0.959 0.956 0.924 0.939 0.955 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
80. F57B10.11 bag-1 3395 7.559 0.930 0.953 0.932 0.953 0.979 0.942 0.927 0.943 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
81. C09G12.9 tsg-101 9451 7.558 0.950 0.977 0.946 0.977 0.960 0.901 0.900 0.947 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
82. T12E12.4 drp-1 7694 7.558 0.937 0.952 0.935 0.952 0.968 0.956 0.903 0.955 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
83. F55G1.8 plk-3 12036 7.558 0.950 0.958 0.938 0.958 0.972 0.952 0.930 0.900 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
84. K10C3.2 ensa-1 19836 7.557 0.933 0.955 0.939 0.955 0.956 0.938 0.921 0.960 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
85. C09G4.3 cks-1 17852 7.557 0.940 0.948 0.937 0.948 0.985 0.943 0.922 0.934 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
86. Y54G11A.11 Y54G11A.11 14933 7.556 0.937 0.967 0.945 0.967 0.949 0.921 0.921 0.949 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
87. E01A2.4 let-504 9788 7.556 0.895 0.960 0.919 0.960 0.986 0.943 0.932 0.961
88. B0495.6 moa-2 6366 7.555 0.941 0.948 0.948 0.948 0.979 0.949 0.876 0.966
89. Y53C10A.12 hsf-1 7899 7.555 0.935 0.972 0.935 0.972 0.934 0.933 0.950 0.924 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
90. Y105E8A.17 ekl-4 4732 7.554 0.931 0.963 0.945 0.963 0.965 0.926 0.920 0.941
91. Y46G5A.4 snrp-200 13827 7.552 0.895 0.952 0.945 0.952 0.975 0.916 0.947 0.970 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
92. T28D9.2 rsp-5 6460 7.552 0.948 0.948 0.943 0.948 0.943 0.895 0.963 0.964 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
93. F58E10.3 ddx-17 15107 7.552 0.939 0.959 0.932 0.959 0.954 0.887 0.949 0.973 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
94. W03F9.5 ttb-1 8682 7.551 0.963 0.958 0.966 0.958 0.950 0.921 0.888 0.947 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
95. C13G5.2 C13G5.2 3532 7.551 0.932 0.976 0.955 0.976 0.937 0.932 0.911 0.932
96. F31E3.3 rfc-4 3828 7.551 0.954 0.946 0.954 0.946 0.970 0.945 0.960 0.876 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
97. Y41D4B.19 npp-8 12992 7.551 0.923 0.957 0.945 0.957 0.949 0.929 0.956 0.935 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
98. C33H5.12 rsp-6 23342 7.551 0.928 0.972 0.921 0.972 0.970 0.879 0.941 0.968 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
99. Y32F6A.1 set-22 2474 7.549 0.945 0.974 0.934 0.974 0.954 0.904 0.920 0.944 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
100. F36D4.3 hum-2 16493 7.548 0.939 0.941 0.941 0.941 0.961 0.969 0.918 0.938 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]

There are 2435 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA