C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54A3.3

Gene ID Gene Name Reads Transcripts Annotation
F54A3.3 cct-3 25183 F54A3.3 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]

Genes with expression patterns similar to F54A3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54A3.3 cct-3 25183 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
2. C07G2.3 cct-5 44703 7.831 0.982 0.981 0.981 0.981 0.964 0.990 0.979 0.973 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
3. T10B5.5 cct-7 24616 7.802 0.963 0.982 0.970 0.982 0.991 0.984 0.967 0.963 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
4. T05C12.7 cct-1 41264 7.792 0.969 0.972 0.963 0.972 0.988 0.984 0.981 0.963 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
5. F01F1.8 cct-6 29460 7.788 0.969 0.988 0.970 0.988 0.969 0.967 0.973 0.964 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
6. W08E3.3 ola-1 20885 7.763 0.974 0.971 0.979 0.971 0.981 0.981 0.951 0.955 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
7. C52E4.3 snr-4 19308 7.762 0.984 0.977 0.963 0.977 0.985 0.987 0.933 0.956 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
8. Y55F3AR.3 cct-8 17979 7.751 0.982 0.958 0.976 0.958 0.949 0.974 0.979 0.975 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
9. T21B10.7 cct-2 13999 7.75 0.971 0.985 0.958 0.985 0.963 0.973 0.963 0.952 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
10. H21P03.1 mbf-1 25586 7.748 0.989 0.966 0.984 0.966 0.983 0.976 0.933 0.951 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
11. T21B10.1 mrpl-50 14595 7.744 0.962 0.987 0.982 0.987 0.945 0.976 0.962 0.943 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
12. T06G6.9 pfd-3 10945 7.742 0.989 0.959 0.959 0.959 0.965 0.968 0.970 0.973 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
13. M88.5 zbp-1 11851 7.728 0.976 0.970 0.966 0.970 0.987 0.947 0.944 0.968 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
14. Y62E10A.1 rla-2 59665 7.726 0.967 0.968 0.966 0.968 0.976 0.977 0.938 0.966 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
15. K08F4.2 gtbp-1 25222 7.726 0.974 0.980 0.971 0.980 0.956 0.960 0.972 0.933 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
16. Y54G2A.31 ubc-13 22367 7.721 0.986 0.985 0.965 0.985 0.962 0.979 0.935 0.924 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
17. Y37E3.9 phb-1 29211 7.705 0.976 0.964 0.956 0.964 0.962 0.979 0.947 0.957 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
18. Y39A1C.3 cey-4 50694 7.701 0.977 0.962 0.963 0.962 0.958 0.990 0.924 0.965 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
19. F17C11.9 eef-1G 37911 7.697 0.982 0.963 0.971 0.963 0.976 0.960 0.904 0.978 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
20. T03F6.5 lis-1 8818 7.696 0.961 0.968 0.932 0.968 0.965 0.969 0.957 0.976 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
21. D2013.7 eif-3.F 21004 7.694 0.970 0.980 0.972 0.980 0.950 0.979 0.903 0.960 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
22. C08F8.1 pfd-1 10199 7.693 0.962 0.954 0.947 0.954 0.965 0.977 0.967 0.967 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
23. T24H7.1 phb-2 28775 7.692 0.982 0.972 0.949 0.972 0.965 0.955 0.963 0.934 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
24. F08F8.3 kap-1 31437 7.69 0.967 0.963 0.967 0.963 0.960 0.972 0.933 0.965 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
25. F25H5.4 eef-2 34846 7.685 0.978 0.949 0.954 0.949 0.963 0.968 0.945 0.979 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
26. R74.1 lars-1 8467 7.679 0.951 0.955 0.971 0.955 0.978 0.971 0.942 0.956 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
27. T08B2.9 fars-1 12650 7.678 0.971 0.974 0.974 0.974 0.935 0.974 0.921 0.955 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
28. ZK863.6 dpy-30 16177 7.677 0.930 0.966 0.962 0.966 0.972 0.976 0.969 0.936 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
29. C09D4.5 rpl-19 56944 7.675 0.977 0.949 0.968 0.949 0.964 0.975 0.921 0.972 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
30. K04D7.2 mspn-1 48187 7.668 0.987 0.949 0.970 0.949 0.949 0.967 0.919 0.978 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
31. H20J04.5 pfd-2 8082 7.667 0.978 0.958 0.955 0.958 0.958 0.973 0.942 0.945 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
32. F53G2.7 mnat-1 10966 7.664 0.951 0.968 0.968 0.968 0.980 0.986 0.921 0.922 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
33. R07B7.3 pqn-53 10459 7.664 0.964 0.942 0.971 0.942 0.965 0.969 0.939 0.972 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
34. B0336.9 swp-1 52442 7.663 0.970 0.947 0.962 0.947 0.973 0.978 0.917 0.969 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
35. F28H1.3 aars-2 13537 7.661 0.949 0.982 0.949 0.982 0.962 0.975 0.946 0.916 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
36. T11G6.1 hars-1 7908 7.661 0.967 0.965 0.965 0.965 0.953 0.974 0.920 0.952 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
37. K08F11.3 cif-1 10218 7.657 0.982 0.978 0.975 0.978 0.942 0.953 0.883 0.966 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
38. F46B6.7 ztf-7 25674 7.655 0.977 0.968 0.955 0.968 0.967 0.959 0.941 0.920 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_505526]
39. K04D7.1 rack-1 48949 7.655 0.977 0.946 0.976 0.946 0.957 0.956 0.921 0.976 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
40. B0261.4 mrpl-47 8210 7.653 0.981 0.952 0.960 0.952 0.960 0.976 0.942 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
41. F22B5.9 fars-3 7209 7.653 0.978 0.970 0.982 0.970 0.947 0.959 0.934 0.913 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
42. F53A3.3 rps-22 81093 7.651 0.973 0.947 0.950 0.947 0.971 0.968 0.940 0.955 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
43. C32E8.2 rpl-13 70096 7.651 0.968 0.953 0.954 0.953 0.969 0.963 0.914 0.977 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
44. ZK637.3 lnkn-1 16095 7.649 0.947 0.955 0.963 0.955 0.974 0.973 0.930 0.952 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
45. B0464.1 dars-1 12331 7.647 0.978 0.978 0.979 0.978 0.958 0.952 0.907 0.917 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
46. F58B3.5 mars-1 6729 7.647 0.971 0.976 0.966 0.976 0.957 0.957 0.959 0.885 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
47. D1007.12 rpl-24.1 73724 7.646 0.966 0.946 0.943 0.946 0.977 0.975 0.923 0.970 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
48. F25H2.11 tct-1 41796 7.643 0.970 0.942 0.940 0.942 0.968 0.966 0.933 0.982 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
49. Y22D7AL.5 hsp-60 42542 7.642 0.948 0.952 0.956 0.952 0.975 0.955 0.943 0.961 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
50. C56C10.8 icd-1 89788 7.639 0.974 0.952 0.966 0.952 0.950 0.956 0.945 0.944 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
51. T26A5.9 dlc-1 59038 7.639 0.940 0.958 0.944 0.958 0.974 0.964 0.939 0.962 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
52. F26D10.3 hsp-1 98277 7.635 0.971 0.969 0.961 0.969 0.947 0.964 0.890 0.964 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
53. Y75B12B.2 cyn-7 98281 7.635 0.979 0.981 0.959 0.981 0.950 0.867 0.964 0.954 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
54. W06H3.3 ctps-1 8363 7.633 0.974 0.961 0.960 0.961 0.964 0.944 0.959 0.910 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
55. T28D9.10 snr-3 9995 7.632 0.971 0.958 0.982 0.958 0.948 0.941 0.965 0.909 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
56. F13G3.4 dylt-1 21345 7.631 0.957 0.963 0.951 0.963 0.980 0.974 0.903 0.940 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
57. F42A6.7 hrp-1 28201 7.63 0.956 0.959 0.951 0.959 0.968 0.957 0.928 0.952 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
58. T01E8.6 mrps-14 9328 7.628 0.969 0.969 0.976 0.969 0.954 0.947 0.923 0.921 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
59. Y71F9B.4 snr-7 13542 7.626 0.975 0.967 0.952 0.967 0.939 0.966 0.947 0.913 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
60. F55H2.6 clu-1 21404 7.626 0.962 0.969 0.958 0.969 0.976 0.958 0.944 0.890 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
61. F58D5.1 hrp-2 17211 7.625 0.967 0.973 0.961 0.973 0.967 0.955 0.924 0.905 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
62. C27H5.3 fust-1 6978 7.622 0.975 0.976 0.976 0.976 0.945 0.942 0.923 0.909 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
63. JC8.3 rpl-12 52728 7.62 0.973 0.945 0.941 0.945 0.973 0.949 0.922 0.972 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
64. C34E10.5 prmt-5 12277 7.62 0.963 0.978 0.972 0.978 0.971 0.951 0.883 0.924 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
65. D2096.8 nap-1 59459 7.619 0.970 0.957 0.982 0.957 0.945 0.940 0.957 0.911 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
66. Y116A8C.42 snr-1 17062 7.616 0.988 0.966 0.962 0.966 0.959 0.921 0.960 0.894 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
67. Y40B1B.5 eif-3.J 15061 7.616 0.979 0.968 0.974 0.968 0.952 0.969 0.850 0.956 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
68. F26F4.10 rars-1 9971 7.615 0.952 0.962 0.965 0.962 0.940 0.964 0.918 0.952 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
69. Y73B6BL.32 lsm-8 11002 7.614 0.963 0.970 0.954 0.970 0.969 0.920 0.948 0.920 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
70. ZC410.2 mppb-1 3991 7.612 0.941 0.960 0.935 0.960 0.948 0.959 0.964 0.945 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
71. Y57G11C.16 rps-18 76576 7.612 0.966 0.943 0.924 0.943 0.978 0.953 0.936 0.969 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
72. F54H12.6 eef-1B.1 37095 7.611 0.978 0.926 0.936 0.926 0.966 0.969 0.939 0.971 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
73. R144.7 larp-1 24669 7.609 0.976 0.981 0.966 0.981 0.964 0.947 0.868 0.926 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
74. F56D12.5 vig-1 42594 7.609 0.985 0.981 0.976 0.981 0.976 0.923 0.893 0.894 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
75. R11D1.8 rpl-28 62242 7.607 0.977 0.931 0.949 0.931 0.951 0.973 0.927 0.968 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
76. T24F1.1 raga-1 16171 7.604 0.921 0.944 0.926 0.944 0.980 0.972 0.980 0.937 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
77. B0205.11 mrpl-9 9162 7.604 0.965 0.957 0.948 0.957 0.971 0.947 0.949 0.910 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
78. Y73B6BL.6 sqd-1 41708 7.604 0.985 0.971 0.965 0.971 0.962 0.978 0.837 0.935 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
79. T06A10.1 mel-46 4407 7.603 0.939 0.969 0.969 0.969 0.933 0.966 0.944 0.914 MEL-46; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED26]
80. T05F1.3 rps-19 88407 7.6 0.967 0.931 0.935 0.931 0.961 0.976 0.930 0.969 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
81. K11D12.2 pqn-51 15951 7.6 0.953 0.943 0.935 0.943 0.975 0.977 0.937 0.937 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
82. Y53C12B.3 nos-3 20231 7.599 0.968 0.967 0.952 0.967 0.969 0.927 0.944 0.905 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
83. R07E5.14 rnp-4 11659 7.599 0.939 0.953 0.942 0.953 0.960 0.967 0.969 0.916 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
84. B0412.4 rps-29 35461 7.599 0.977 0.931 0.911 0.931 0.957 0.973 0.936 0.983 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
85. C34E10.11 mrps-26 4649 7.598 0.952 0.957 0.975 0.957 0.918 0.949 0.944 0.946 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
86. K04G7.10 rnp-7 11219 7.597 0.984 0.968 0.970 0.968 0.949 0.957 0.858 0.943 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
87. F53G12.10 rpl-7 78552 7.595 0.952 0.936 0.943 0.936 0.953 0.975 0.930 0.970 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
88. Y62E10A.11 mdt-9 5971 7.595 0.977 0.953 0.938 0.953 0.965 0.954 0.952 0.903 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
89. T27F7.3 eif-1 28176 7.594 0.980 0.961 0.976 0.961 0.933 0.951 0.880 0.952 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
90. T16G1.11 eif-3.K 14014 7.593 0.977 0.970 0.962 0.970 0.953 0.958 0.886 0.917 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
91. T19B4.2 npp-7 13073 7.593 0.949 0.950 0.947 0.950 0.972 0.926 0.957 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
92. D2023.5 mpst-1 10328 7.593 0.970 0.966 0.968 0.966 0.954 0.912 0.964 0.893 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
93. Y18D10A.19 fkb-2 48128 7.591 0.981 0.969 0.965 0.969 0.952 0.933 0.904 0.918 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
94. T05H4.6 erfa-1 12542 7.59 0.963 0.956 0.982 0.956 0.949 0.948 0.897 0.939 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
95. C15H11.4 dhs-22 21674 7.585 0.933 0.954 0.936 0.954 0.954 0.974 0.911 0.969 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
96. Y39G10AR.20 tbca-1 4155 7.585 0.947 0.941 0.941 0.941 0.963 0.967 0.951 0.934 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
97. ZK1058.4 ccdc-47 8879 7.585 0.934 0.964 0.948 0.964 0.981 0.977 0.897 0.920 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
98. F58E10.3 ddx-17 15107 7.585 0.929 0.969 0.936 0.969 0.951 0.958 0.956 0.917 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
99. ZK742.1 xpo-1 20741 7.584 0.886 0.963 0.942 0.963 0.978 0.953 0.956 0.943 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
100. R151.9 pfd-5 6951 7.583 0.976 0.903 0.933 0.903 0.973 0.983 0.953 0.959 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]

There are 1569 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA