C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for K08E4.1

Gene ID Gene Name Reads Transcripts Annotation
K08E4.1 spt-5 2066 K08E4.1 Transcription elongation factor SPT5 [Source:UniProtKB/Swiss-Prot;Acc:Q21338]

Genes with expression patterns similar to K08E4.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. K08E4.1 spt-5 2066 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Transcription elongation factor SPT5 [Source:UniProtKB/Swiss-Prot;Acc:Q21338]
2. C15H11.4 dhs-22 21674 7.617 0.941 0.956 0.943 0.956 0.982 0.960 0.932 0.947 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
3. F22D6.3 nars-1 18624 7.601 0.931 0.965 0.915 0.965 0.990 0.980 0.901 0.954 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
4. T11G6.1 hars-1 7908 7.594 0.936 0.945 0.943 0.945 0.969 0.980 0.903 0.973 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
5. T08B2.9 fars-1 12650 7.591 0.910 0.929 0.953 0.929 0.980 0.974 0.943 0.973 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
6. F28H1.3 aars-2 13537 7.589 0.939 0.919 0.962 0.919 0.979 0.976 0.916 0.979 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
7. ZK616.6 perm-3 16186 7.588 0.952 0.952 0.905 0.952 0.983 0.968 0.939 0.937 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
8. T16G1.11 eif-3.K 14014 7.586 0.935 0.953 0.952 0.953 0.982 0.969 0.916 0.926 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
9. D2013.7 eif-3.F 21004 7.579 0.923 0.917 0.960 0.917 0.983 0.977 0.947 0.955 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
10. K01G5.4 ran-1 32379 7.575 0.947 0.953 0.882 0.953 0.990 0.980 0.932 0.938 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
11. ZK1098.7 mrps-23 2365 7.567 0.919 0.944 0.936 0.944 0.983 0.969 0.906 0.966 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]
12. F58D5.1 hrp-2 17211 7.565 0.931 0.932 0.957 0.932 0.975 0.977 0.905 0.956 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
13. F23F1.1 nfyc-1 9983 7.563 0.945 0.959 0.907 0.959 0.950 0.961 0.942 0.940 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
14. C02B10.5 C02B10.5 9171 7.563 0.939 0.945 0.918 0.945 0.958 0.978 0.933 0.947
15. C25D7.8 otub-1 7941 7.561 0.959 0.968 0.919 0.968 0.975 0.955 0.847 0.970 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
16. T19B4.2 npp-7 13073 7.554 0.947 0.941 0.922 0.941 0.965 0.943 0.941 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
17. H19N07.1 erfa-3 19869 7.548 0.925 0.946 0.937 0.946 0.983 0.975 0.861 0.975 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
18. Y39G10AR.9 Y39G10AR.9 3972 7.545 0.922 0.950 0.912 0.950 0.968 0.968 0.933 0.942
19. Y111B2A.18 rsp-3 43731 7.543 0.951 0.924 0.900 0.924 0.986 0.966 0.942 0.950 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
20. B0303.15 mrpl-11 9889 7.542 0.918 0.959 0.958 0.959 0.963 0.945 0.923 0.917 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
21. F13G3.4 dylt-1 21345 7.541 0.928 0.932 0.967 0.932 0.973 0.964 0.903 0.942 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
22. F45H11.2 ned-8 13247 7.536 0.943 0.957 0.875 0.957 0.972 0.942 0.924 0.966 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
23. W02B12.3 rsp-1 9235 7.534 0.945 0.941 0.919 0.941 0.983 0.956 0.893 0.956 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
24. F26F4.10 rars-1 9971 7.533 0.917 0.923 0.932 0.923 0.988 0.980 0.926 0.944 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
25. T17E9.2 nmt-1 8017 7.528 0.923 0.948 0.950 0.948 0.980 0.950 0.870 0.959 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
26. Y40B1B.5 eif-3.J 15061 7.528 0.939 0.928 0.924 0.928 0.975 0.979 0.907 0.948 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
27. F59E12.11 sam-4 8179 7.525 0.932 0.952 0.930 0.952 0.943 0.966 0.899 0.951
28. C33H5.12 rsp-6 23342 7.524 0.938 0.927 0.935 0.927 0.975 0.960 0.913 0.949 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
29. F42A6.7 hrp-1 28201 7.524 0.948 0.905 0.939 0.905 0.981 0.977 0.928 0.941 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
30. K08F4.2 gtbp-1 25222 7.523 0.936 0.908 0.950 0.908 0.959 0.974 0.930 0.958 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
31. F33D4.7 emc-6 6534 7.522 0.911 0.933 0.929 0.933 0.959 0.959 0.932 0.966 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
32. Y56A3A.20 ccf-1 18463 7.52 0.905 0.947 0.932 0.947 0.969 0.966 0.898 0.956 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
33. ZK1058.4 ccdc-47 8879 7.52 0.956 0.931 0.952 0.931 0.970 0.970 0.871 0.939 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
34. T05H4.6 erfa-1 12542 7.516 0.909 0.930 0.932 0.930 0.965 0.953 0.932 0.965 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
35. ZK863.6 dpy-30 16177 7.514 0.931 0.941 0.927 0.941 0.947 0.951 0.911 0.965 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
36. W04D2.5 mrps-11 5757 7.512 0.924 0.949 0.932 0.949 0.959 0.947 0.933 0.919 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
37. F08F8.3 kap-1 31437 7.51 0.930 0.942 0.903 0.942 0.972 0.945 0.931 0.945 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
38. R13F6.10 cra-1 11610 7.508 0.914 0.936 0.946 0.936 0.977 0.972 0.890 0.937 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
39. F10E7.6 F10E7.6 2788 7.506 0.923 0.975 0.913 0.975 0.952 0.944 0.913 0.911
40. H21P03.1 mbf-1 25586 7.506 0.910 0.956 0.914 0.956 0.963 0.954 0.891 0.962 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
41. T21B10.1 mrpl-50 14595 7.504 0.935 0.923 0.938 0.923 0.943 0.977 0.950 0.915 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
42. F32H2.1 snpc-4 7581 7.504 0.936 0.939 0.899 0.939 0.963 0.972 0.927 0.929 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
43. K04G2.1 iftb-1 12590 7.503 0.934 0.935 0.931 0.935 0.958 0.946 0.917 0.947 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
44. F58E10.3 ddx-17 15107 7.502 0.932 0.924 0.942 0.924 0.964 0.961 0.907 0.948 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
45. T28D9.10 snr-3 9995 7.502 0.939 0.960 0.908 0.960 0.950 0.960 0.887 0.938 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
46. T06A10.4 lsy-13 7631 7.499 0.925 0.933 0.921 0.933 0.972 0.943 0.939 0.933
47. W02F12.6 sna-1 7338 7.498 0.923 0.966 0.896 0.966 0.977 0.967 0.871 0.932 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
48. Y54E2A.3 tac-1 6308 7.496 0.919 0.946 0.879 0.946 0.985 0.942 0.904 0.975 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
49. T01E8.6 mrps-14 9328 7.495 0.920 0.937 0.929 0.937 0.961 0.959 0.914 0.938 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
50. ZK742.1 xpo-1 20741 7.495 0.934 0.925 0.925 0.925 0.975 0.960 0.879 0.972 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
51. K11D12.2 pqn-51 15951 7.494 0.923 0.937 0.935 0.937 0.969 0.982 0.885 0.926 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
52. C08B11.5 sap-49 10553 7.493 0.954 0.913 0.942 0.913 0.987 0.958 0.902 0.924 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
53. C56C10.8 icd-1 89788 7.493 0.933 0.929 0.871 0.929 0.971 0.970 0.949 0.941 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
54. F01F1.8 cct-6 29460 7.492 0.943 0.919 0.956 0.919 0.940 0.968 0.930 0.917 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
55. C39E9.14 dli-1 5650 7.491 0.891 0.945 0.935 0.945 0.971 0.943 0.892 0.969 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
56. C47D12.6 tars-1 23488 7.49 0.933 0.928 0.934 0.928 0.973 0.981 0.844 0.969 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
57. Y34D9A.1 mrpl-38 5291 7.49 0.938 0.914 0.925 0.914 0.986 0.968 0.886 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
58. ZK1010.3 frg-1 3533 7.489 0.945 0.945 0.927 0.945 0.957 0.937 0.894 0.939 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
59. Y17G7A.1 hmg-12 29989 7.489 0.944 0.955 0.903 0.955 0.952 0.933 0.915 0.932 HMG [Source:RefSeq peptide;Acc:NP_496544]
60. Y113G7B.23 swsn-1 13766 7.488 0.950 0.948 0.917 0.948 0.948 0.957 0.862 0.958 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
61. T12D8.8 hip-1 18283 7.488 0.953 0.916 0.909 0.916 0.977 0.959 0.912 0.946 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
62. Y59A8B.12 Y59A8B.12 2566 7.488 0.936 0.938 0.925 0.938 0.911 0.964 0.910 0.966
63. Y97E10AR.5 rpb-9 3598 7.487 0.936 0.905 0.947 0.905 0.971 0.980 0.924 0.919 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
64. T26A5.7 set-1 6948 7.484 0.903 0.928 0.906 0.928 0.967 0.958 0.931 0.963 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
65. T10B5.5 cct-7 24616 7.482 0.914 0.935 0.925 0.935 0.954 0.973 0.895 0.951 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
66. T04A8.14 emb-5 11746 7.481 0.929 0.955 0.917 0.955 0.980 0.963 0.852 0.930 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
67. B0035.3 B0035.3 4118 7.48 0.926 0.943 0.908 0.943 0.963 0.956 0.896 0.945
68. F36A2.1 cids-2 4551 7.48 0.935 0.938 0.885 0.938 0.963 0.940 0.938 0.943 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
69. T02G5.9 kars-1 9763 7.48 0.899 0.928 0.914 0.928 0.973 0.966 0.948 0.924 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
70. R07E5.14 rnp-4 11659 7.478 0.943 0.939 0.913 0.939 0.924 0.968 0.927 0.925 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
71. Y54E5A.4 npp-4 6288 7.478 0.928 0.930 0.933 0.930 0.975 0.952 0.885 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
72. DY3.1 tin-13 5225 7.478 0.919 0.927 0.881 0.927 0.980 0.979 0.940 0.925 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
73. ZC434.5 ears-1 4725 7.476 0.905 0.934 0.897 0.934 0.972 0.972 0.940 0.922 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
74. F22B5.9 fars-3 7209 7.476 0.920 0.882 0.926 0.882 0.987 0.973 0.947 0.959 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
75. C18D11.4 rsp-8 18308 7.475 0.945 0.913 0.933 0.913 0.966 0.933 0.907 0.965 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
76. K08F11.3 cif-1 10218 7.474 0.949 0.899 0.909 0.899 0.990 0.974 0.919 0.935 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
77. Y54G11A.11 Y54G11A.11 14933 7.474 0.907 0.943 0.927 0.943 0.949 0.911 0.922 0.972 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
78. C26E6.4 rpb-2 7053 7.473 0.910 0.945 0.911 0.945 0.969 0.975 0.915 0.903 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
79. B0464.1 dars-1 12331 7.473 0.910 0.895 0.924 0.895 0.979 0.968 0.940 0.962 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
80. T05H4.14 gad-1 7979 7.473 0.930 0.951 0.878 0.951 0.977 0.938 0.898 0.950 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
81. B0261.4 mrpl-47 8210 7.472 0.898 0.927 0.903 0.927 0.981 0.981 0.937 0.918 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
82. T27F7.3 eif-1 28176 7.472 0.923 0.914 0.923 0.914 0.970 0.955 0.922 0.951 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
83. C53D5.6 imb-3 28921 7.471 0.910 0.944 0.923 0.944 0.979 0.935 0.917 0.919 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
84. T23H2.1 npp-12 12425 7.471 0.932 0.933 0.914 0.933 0.958 0.966 0.897 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
85. Y38A8.3 ulp-2 7403 7.469 0.912 0.953 0.924 0.953 0.977 0.951 0.840 0.959 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
86. T05C12.7 cct-1 41264 7.468 0.936 0.936 0.937 0.936 0.945 0.960 0.926 0.892 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
87. M88.7 cisd-3.1 5713 7.468 0.876 0.922 0.949 0.922 0.940 0.973 0.932 0.954 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
88. Y55F3AM.12 dcap-1 8679 7.468 0.960 0.946 0.913 0.946 0.899 0.964 0.915 0.925 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
89. F21C3.4 rde-2 6286 7.467 0.898 0.944 0.920 0.944 0.926 0.971 0.932 0.932
90. B0511.10 eif-3.E 10041 7.466 0.929 0.935 0.920 0.935 0.951 0.955 0.932 0.909 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
91. Y46G5A.4 snrp-200 13827 7.466 0.879 0.926 0.921 0.926 0.982 0.970 0.906 0.956 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
92. Y116A8C.35 uaf-2 13808 7.466 0.943 0.928 0.913 0.928 0.976 0.969 0.888 0.921 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
93. R05D11.3 ran-4 15494 7.466 0.955 0.929 0.918 0.929 0.969 0.948 0.860 0.958 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
94. T10F2.4 prp-19 11298 7.463 0.940 0.937 0.919 0.937 0.982 0.932 0.883 0.933 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
95. K07A1.12 lin-53 15817 7.462 0.930 0.951 0.910 0.951 0.932 0.940 0.929 0.919 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
96. Y54E10A.9 vbh-1 28746 7.461 0.928 0.941 0.920 0.941 0.958 0.945 0.867 0.961 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
97. F39B2.2 uev-1 13597 7.461 0.938 0.958 0.934 0.958 0.949 0.876 0.892 0.956 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
98. Y53C12B.3 nos-3 20231 7.46 0.906 0.950 0.928 0.950 0.935 0.954 0.908 0.929 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
99. C26D10.2 hel-1 28697 7.46 0.931 0.905 0.926 0.905 0.981 0.941 0.926 0.945 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
100. R151.9 pfd-5 6951 7.46 0.922 0.948 0.888 0.948 0.948 0.963 0.898 0.945 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]

There are 1334 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA