C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for W04D2.5

Gene ID Gene Name Reads Transcripts Annotation
W04D2.5 mrps-11 5757 W04D2.5 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]

Genes with expression patterns similar to W04D2.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W04D2.5 mrps-11 5757 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
2. T08B2.9 fars-1 12650 7.748 0.984 0.961 0.982 0.961 0.962 0.958 0.978 0.962 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
3. T06A10.4 lsy-13 7631 7.727 0.985 0.965 0.977 0.965 0.983 0.950 0.943 0.959
4. T05H4.6 erfa-1 12542 7.727 0.988 0.949 0.989 0.949 0.968 0.950 0.979 0.955 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
5. D2013.7 eif-3.F 21004 7.709 0.984 0.949 0.972 0.949 0.982 0.959 0.954 0.960 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
6. T16G1.11 eif-3.K 14014 7.705 0.983 0.958 0.974 0.958 0.971 0.927 0.965 0.969 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
7. K11D12.2 pqn-51 15951 7.705 0.974 0.959 0.959 0.959 0.986 0.962 0.962 0.944 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
8. H21P03.1 mbf-1 25586 7.693 0.983 0.967 0.969 0.967 0.968 0.942 0.929 0.968 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
9. T01E8.6 mrps-14 9328 7.69 0.975 0.952 0.983 0.952 0.978 0.960 0.967 0.923 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
10. B0303.15 mrpl-11 9889 7.688 0.981 0.963 0.970 0.963 0.962 0.968 0.945 0.936 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
11. Y40B1B.5 eif-3.J 15061 7.677 0.980 0.960 0.979 0.960 0.967 0.946 0.941 0.944 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
12. F22D6.3 nars-1 18624 7.674 0.970 0.958 0.957 0.958 0.979 0.943 0.954 0.955 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
13. ZK616.6 perm-3 16186 7.671 0.973 0.953 0.966 0.953 0.966 0.949 0.950 0.961 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
14. T17E9.2 nmt-1 8017 7.668 0.983 0.962 0.979 0.962 0.961 0.942 0.954 0.925 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
15. H19N07.1 erfa-3 19869 7.666 0.983 0.960 0.981 0.960 0.969 0.934 0.934 0.945 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
16. F22B5.9 fars-3 7209 7.666 0.988 0.911 0.980 0.911 0.970 0.966 0.970 0.970 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
17. C34E10.5 prmt-5 12277 7.663 0.971 0.944 0.976 0.944 0.982 0.937 0.960 0.949 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
18. T09A5.7 T09A5.7 5907 7.657 0.958 0.947 0.958 0.947 0.974 0.950 0.981 0.942
19. Y102A5A.1 cand-1 11808 7.657 0.979 0.950 0.979 0.950 0.968 0.936 0.948 0.947 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
20. C15H11.4 dhs-22 21674 7.657 0.966 0.956 0.963 0.956 0.967 0.956 0.947 0.946 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
21. F33D4.7 emc-6 6534 7.655 0.965 0.938 0.972 0.938 0.968 0.974 0.944 0.956 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
22. C02B10.5 C02B10.5 9171 7.653 0.955 0.945 0.952 0.945 0.970 0.963 0.978 0.945
23. F13G3.4 dylt-1 21345 7.649 0.966 0.944 0.974 0.944 0.976 0.948 0.956 0.941 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
24. F26F4.10 rars-1 9971 7.649 0.962 0.941 0.979 0.941 0.969 0.940 0.984 0.933 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
25. R151.9 pfd-5 6951 7.649 0.980 0.961 0.955 0.961 0.952 0.954 0.923 0.963 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
26. F28H1.3 aars-2 13537 7.648 0.962 0.956 0.970 0.956 0.961 0.955 0.955 0.933 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
27. T12G3.5 mrpl-51 5192 7.643 0.976 0.963 0.952 0.963 0.988 0.968 0.900 0.933 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
28. Y39G10AR.9 Y39G10AR.9 3972 7.641 0.979 0.936 0.968 0.936 0.971 0.951 0.954 0.946
29. F08F8.3 kap-1 31437 7.639 0.989 0.960 0.974 0.960 0.961 0.918 0.946 0.931 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
30. T02G5.9 kars-1 9763 7.637 0.983 0.951 0.961 0.951 0.981 0.922 0.952 0.936 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
31. F38A5.2 F38A5.2 9024 7.637 0.967 0.930 0.945 0.930 0.986 0.945 0.966 0.968
32. T24H7.1 phb-2 28775 7.632 0.968 0.953 0.921 0.953 0.968 0.952 0.944 0.973 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
33. R05D11.3 ran-4 15494 7.63 0.973 0.956 0.968 0.956 0.957 0.928 0.939 0.953 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
34. C18E9.6 tomm-40 13426 7.63 0.979 0.934 0.970 0.934 0.970 0.951 0.950 0.942 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
35. K03B4.2 K03B4.2 21796 7.628 0.978 0.947 0.966 0.947 0.960 0.929 0.953 0.948
36. Y38A8.3 ulp-2 7403 7.627 0.951 0.964 0.970 0.964 0.981 0.933 0.927 0.937 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
37. Y54E5A.4 npp-4 6288 7.625 0.981 0.951 0.951 0.951 0.967 0.932 0.946 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
38. Y73B6BL.6 sqd-1 41708 7.622 0.980 0.940 0.986 0.940 0.956 0.941 0.942 0.937 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
39. F10G8.3 rae-1 7542 7.622 0.985 0.949 0.968 0.949 0.970 0.910 0.939 0.952 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
40. Y111B2A.18 rsp-3 43731 7.621 0.964 0.956 0.943 0.956 0.967 0.907 0.965 0.963 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
41. B0205.11 mrpl-9 9162 7.618 0.972 0.968 0.979 0.968 0.964 0.941 0.931 0.895 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
42. F57B9.5 byn-1 58236 7.618 0.983 0.955 0.957 0.955 0.943 0.910 0.950 0.965 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
43. Y34D9A.1 mrpl-38 5291 7.616 0.952 0.948 0.969 0.948 0.963 0.927 0.955 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
44. B0285.1 cdk-12 5900 7.616 0.960 0.957 0.970 0.957 0.965 0.933 0.923 0.951 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
45. C52E4.6 cyl-1 6405 7.615 0.970 0.950 0.934 0.950 0.984 0.924 0.953 0.950 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
46. T19B4.2 npp-7 13073 7.615 0.971 0.948 0.972 0.948 0.974 0.937 0.945 0.920 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
47. Y56A3A.20 ccf-1 18463 7.614 0.962 0.943 0.964 0.943 0.957 0.938 0.959 0.948 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
48. B0464.1 dars-1 12331 7.611 0.972 0.932 0.971 0.932 0.971 0.885 0.980 0.968 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
49. B0205.7 kin-3 29775 7.611 0.985 0.957 0.974 0.957 0.913 0.912 0.946 0.967 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
50. B0261.4 mrpl-47 8210 7.61 0.958 0.945 0.963 0.945 0.966 0.941 0.953 0.939 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
51. F56F3.1 ifet-1 25772 7.609 0.976 0.939 0.971 0.939 0.970 0.944 0.943 0.927 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
52. C47D12.6 tars-1 23488 7.608 0.964 0.950 0.965 0.950 0.974 0.935 0.928 0.942 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
53. F32H2.4 thoc-3 3861 7.606 0.923 0.969 0.942 0.969 0.987 0.942 0.948 0.926 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
54. T19A6.3 nepr-1 6606 7.606 0.965 0.957 0.965 0.957 0.946 0.937 0.941 0.938 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
55. Y54E5B.3 let-49 2437 7.605 0.966 0.955 0.945 0.955 0.963 0.924 0.952 0.945 Mediator of RNA polymerase II transcription subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q17]
56. C28C12.9 acdh-13 4102 7.604 0.952 0.972 0.944 0.972 0.963 0.931 0.952 0.918 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_501452]
57. T27F7.3 eif-1 28176 7.604 0.978 0.941 0.971 0.941 0.958 0.895 0.961 0.959 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
58. B0511.10 eif-3.E 10041 7.604 0.982 0.954 0.940 0.954 0.941 0.934 0.973 0.926 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
59. K08D10.3 rnp-3 3872 7.602 0.972 0.932 0.965 0.932 0.957 0.939 0.946 0.959 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500505]
60. F42A6.7 hrp-1 28201 7.601 0.973 0.927 0.970 0.927 0.983 0.903 0.963 0.955 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
61. T04A8.14 emb-5 11746 7.6 0.920 0.968 0.952 0.968 0.959 0.951 0.938 0.944 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
62. C26E6.4 rpb-2 7053 7.6 0.939 0.962 0.970 0.962 0.950 0.935 0.955 0.927 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
63. T03F6.5 lis-1 8818 7.599 0.970 0.955 0.960 0.955 0.965 0.966 0.918 0.910 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
64. ZK1058.4 ccdc-47 8879 7.599 0.957 0.949 0.957 0.949 0.968 0.964 0.929 0.926 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
65. Y66H1A.3 mrpl-55 4581 7.599 0.960 0.936 0.941 0.936 0.969 0.959 0.956 0.942 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499930]
66. K04G7.10 rnp-7 11219 7.598 0.977 0.938 0.965 0.938 0.941 0.947 0.948 0.944 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
67. Y71F9B.16 dnj-30 4262 7.596 0.980 0.952 0.946 0.952 0.946 0.924 0.949 0.947 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
68. F23F1.1 nfyc-1 9983 7.596 0.955 0.963 0.944 0.963 0.955 0.918 0.963 0.935 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
69. B0511.8 mrps-30 5050 7.595 0.936 0.964 0.968 0.964 0.971 0.932 0.949 0.911 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
70. W02B12.3 rsp-1 9235 7.595 0.977 0.955 0.954 0.955 0.936 0.906 0.960 0.952 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
71. T10F2.4 prp-19 11298 7.595 0.979 0.966 0.963 0.966 0.975 0.875 0.952 0.919 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
72. F23B12.6 fntb-1 4392 7.595 0.967 0.956 0.940 0.956 0.974 0.956 0.890 0.956 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
73. F58B3.5 mars-1 6729 7.594 0.982 0.930 0.970 0.930 0.972 0.945 0.924 0.941 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
74. F29C4.6 tut-1 5637 7.593 0.972 0.954 0.973 0.954 0.969 0.940 0.941 0.890 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
75. Y65B4BR.5 icd-2 58321 7.593 0.966 0.941 0.967 0.941 0.953 0.899 0.964 0.962 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
76. T14B4.3 T14B4.3 2875 7.592 0.964 0.952 0.974 0.952 0.969 0.929 0.958 0.894
77. C08F8.1 pfd-1 10199 7.591 0.979 0.945 0.942 0.945 0.947 0.960 0.934 0.939 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
78. Y54E10A.9 vbh-1 28746 7.591 0.983 0.966 0.979 0.966 0.934 0.857 0.949 0.957 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
79. T21B10.1 mrpl-50 14595 7.59 0.969 0.952 0.973 0.952 0.953 0.949 0.943 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
80. F39B2.10 dnj-12 35162 7.589 0.983 0.962 0.979 0.962 0.909 0.902 0.934 0.958 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
81. T11G6.1 hars-1 7908 7.589 0.977 0.947 0.979 0.947 0.962 0.947 0.923 0.907 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
82. F58D5.1 hrp-2 17211 7.589 0.970 0.945 0.968 0.945 0.964 0.901 0.940 0.956 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
83. C50C3.6 prp-8 19582 7.587 0.961 0.958 0.968 0.958 0.960 0.914 0.928 0.940 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
84. Y62E10A.11 mdt-9 5971 7.586 0.984 0.971 0.960 0.971 0.955 0.936 0.927 0.882 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
85. ZK652.1 snr-5 5993 7.585 0.973 0.931 0.967 0.931 0.969 0.960 0.916 0.938 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
86. D1022.1 ubc-6 9722 7.583 0.954 0.942 0.932 0.942 0.974 0.943 0.972 0.924 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
87. K08F11.3 cif-1 10218 7.582 0.983 0.918 0.973 0.918 0.963 0.921 0.973 0.933 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
88. R07B7.3 pqn-53 10459 7.58 0.973 0.950 0.976 0.950 0.957 0.941 0.897 0.936 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
89. D2023.6 D2023.6 5595 7.579 0.955 0.955 0.953 0.955 0.955 0.939 0.936 0.931
90. R07E5.14 rnp-4 11659 7.579 0.968 0.943 0.962 0.943 0.957 0.957 0.909 0.940 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
91. Y47G6A.20 rnp-6 5542 7.578 0.957 0.962 0.947 0.962 0.955 0.936 0.925 0.934 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
92. F59E12.11 sam-4 8179 7.578 0.967 0.959 0.964 0.959 0.943 0.931 0.948 0.907
93. K04G2.1 iftb-1 12590 7.577 0.967 0.959 0.959 0.959 0.947 0.890 0.951 0.945 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
94. K07A12.7 mrps-15 6325 7.577 0.967 0.947 0.934 0.947 0.988 0.913 0.961 0.920 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
95. B0464.7 baf-1 10161 7.576 0.974 0.948 0.927 0.948 0.956 0.935 0.952 0.936 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
96. K02F3.11 rnp-5 6205 7.576 0.924 0.965 0.941 0.965 0.977 0.943 0.926 0.935 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
97. ZK742.1 xpo-1 20741 7.576 0.908 0.962 0.967 0.962 0.972 0.947 0.930 0.928 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
98. M106.4 gmps-1 12232 7.576 0.956 0.960 0.966 0.960 0.976 0.917 0.901 0.940 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
99. C08B11.5 sap-49 10553 7.576 0.970 0.940 0.972 0.940 0.974 0.941 0.962 0.877 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
100. C09D4.5 rpl-19 56944 7.575 0.949 0.932 0.950 0.932 0.975 0.916 0.968 0.953 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]

There are 2240 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA