C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y55F3AM.12

Gene ID Gene Name Reads Transcripts Annotation
Y55F3AM.12 dcap-1 8679 Y55F3AM.12 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]

Genes with expression patterns similar to Y55F3AM.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y55F3AM.12 dcap-1 8679 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
2. Y37D8A.9 mrg-1 14369 7.773 0.957 0.985 0.979 0.985 0.987 0.986 0.966 0.928 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
3. Y41D4B.19 npp-8 12992 7.758 0.943 0.981 0.984 0.981 0.981 0.979 0.955 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
4. R07E5.14 rnp-4 11659 7.752 0.973 0.980 0.977 0.980 0.985 0.974 0.969 0.914 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
5. K08F4.2 gtbp-1 25222 7.743 0.959 0.969 0.952 0.969 0.976 0.977 0.977 0.964 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
6. F43G9.5 cfim-1 9169 7.731 0.973 0.983 0.989 0.983 0.984 0.953 0.968 0.898 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
7. R06A4.4 imb-2 10302 7.73 0.965 0.973 0.991 0.973 0.979 0.968 0.948 0.933 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
8. F26B1.3 ima-2 18826 7.728 0.956 0.973 0.986 0.973 0.975 0.973 0.971 0.921 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
9. T25G3.4 T25G3.4 9394 7.727 0.939 0.972 0.951 0.972 0.976 0.984 0.967 0.966 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
10. Y71G12B.9 lin-65 7476 7.727 0.937 0.981 0.977 0.981 0.985 0.990 0.948 0.928 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
11. T19B4.2 npp-7 13073 7.726 0.979 0.986 0.969 0.986 0.938 0.970 0.934 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
12. Y53C12B.3 nos-3 20231 7.721 0.951 0.977 0.962 0.977 0.975 0.980 0.952 0.947 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. F59E12.11 sam-4 8179 7.714 0.973 0.976 0.986 0.976 0.961 0.978 0.897 0.967
14. Y116A8C.42 snr-1 17062 7.712 0.958 0.979 0.962 0.979 0.982 0.979 0.964 0.909 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
15. K07D4.3 rpn-11 8834 7.709 0.957 0.972 0.988 0.972 0.968 0.944 0.933 0.975 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
16. ZK1128.6 ttll-4 6059 7.706 0.931 0.986 0.975 0.986 0.990 0.959 0.932 0.947 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
17. Y39E4B.2 snpc-1.2 5800 7.704 0.949 0.980 0.965 0.980 0.971 0.962 0.967 0.930 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
18. F32H2.1 snpc-4 7581 7.701 0.956 0.978 0.968 0.978 0.948 0.988 0.919 0.966 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
19. C26E6.7 eri-9 8069 7.701 0.951 0.984 0.977 0.984 0.994 0.964 0.935 0.912 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
20. C30G12.7 puf-8 5785 7.699 0.936 0.984 0.987 0.984 0.952 0.945 0.973 0.938 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
21. Y14H12B.2 Y14H12B.2 6496 7.698 0.953 0.975 0.992 0.975 0.979 0.937 0.978 0.909
22. C41C4.6 ulp-4 13338 7.697 0.929 0.963 0.982 0.963 0.984 0.981 0.962 0.933 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
23. K07A1.12 lin-53 15817 7.697 0.944 0.984 0.991 0.984 0.976 0.947 0.983 0.888 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
24. F59A2.1 npp-9 34375 7.695 0.960 0.976 0.966 0.976 0.972 0.976 0.963 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
25. K04G2.2 aho-3 15189 7.693 0.941 0.975 0.983 0.975 0.981 0.978 0.967 0.893
26. F21C3.4 rde-2 6286 7.692 0.925 0.991 0.970 0.991 0.973 0.971 0.957 0.914
27. F45E12.2 brf-1 4667 7.691 0.940 0.992 0.980 0.992 0.965 0.990 0.965 0.867 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
28. T28D9.10 snr-3 9995 7.69 0.965 0.967 0.905 0.967 0.976 0.982 0.966 0.962 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
29. C46A5.9 hcf-1 6295 7.689 0.966 0.978 0.970 0.978 0.984 0.966 0.902 0.945 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
30. C34E10.2 gop-2 5684 7.689 0.971 0.980 0.978 0.980 0.984 0.941 0.941 0.914 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
31. R06F6.1 cdl-1 14167 7.686 0.908 0.982 0.981 0.982 0.987 0.962 0.964 0.920 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
32. F32A5.7 lsm-4 3785 7.682 0.968 0.979 0.976 0.979 0.955 0.961 0.914 0.950 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
33. Y37D8A.11 cec-7 8801 7.681 0.970 0.982 0.974 0.982 0.974 0.957 0.962 0.880 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
34. F16A11.2 rtcb-1 2276 7.677 0.957 0.973 0.953 0.973 0.967 0.969 0.907 0.978 tRNA-splicing ligase RtcB homolog [Source:UniProtKB/Swiss-Prot;Acc:P90838]
35. F52C9.7 mog-3 9880 7.677 0.962 0.979 0.974 0.979 0.978 0.983 0.872 0.950 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
36. F09G2.9 attf-2 14771 7.676 0.980 0.988 0.988 0.988 0.963 0.947 0.952 0.870 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
37. F23F1.1 nfyc-1 9983 7.674 0.965 0.978 0.986 0.978 0.983 0.973 0.903 0.908 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
38. C09G9.2 npp-23 2886 7.671 0.970 0.970 0.969 0.970 0.954 0.954 0.938 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
39. F10E9.7 F10E9.7 1842 7.669 0.975 0.948 0.977 0.948 0.965 0.977 0.918 0.961
40. F44G4.4 tdp-1 3335 7.667 0.950 0.976 0.952 0.976 0.989 0.963 0.973 0.888 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
41. T21B10.7 cct-2 13999 7.666 0.961 0.948 0.959 0.948 0.971 0.977 0.964 0.938 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
42. CC4.3 smu-1 4169 7.664 0.962 0.974 0.969 0.974 0.969 0.941 0.922 0.953 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
43. Y41D4B.13 ced-2 10100 7.664 0.957 0.977 0.988 0.977 0.971 0.941 0.956 0.897 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
44. T01B7.6 trcs-2 9792 7.663 0.933 0.992 0.983 0.992 0.967 0.945 0.906 0.945 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
45. Y37E3.3 rpb-10 4051 7.662 0.962 0.950 0.960 0.950 0.978 0.979 0.955 0.928 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
46. K01G5.2 hpl-2 6781 7.66 0.947 0.974 0.968 0.974 0.966 0.982 0.969 0.880 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
47. C55A6.2 ttll-5 5158 7.657 0.954 0.981 0.968 0.981 0.961 0.962 0.933 0.917 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
48. F58E10.3 ddx-17 15107 7.657 0.957 0.976 0.980 0.976 0.938 0.967 0.922 0.941 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
49. C06G3.2 klp-18 4885 7.656 0.957 0.967 0.958 0.967 0.984 0.964 0.982 0.877 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
50. C43E11.10 cdc-6 5331 7.655 0.955 0.981 0.974 0.981 0.946 0.979 0.971 0.868 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
51. C02F5.4 cids-1 3125 7.655 0.937 0.979 0.973 0.979 0.958 0.965 0.927 0.937 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
52. T28D9.2 rsp-5 6460 7.653 0.975 0.961 0.969 0.961 0.988 0.959 0.924 0.916 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
53. T21B10.1 mrpl-50 14595 7.653 0.948 0.969 0.950 0.969 0.950 0.979 0.951 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
54. JC8.6 lin-54 5789 7.651 0.923 0.978 0.979 0.978 0.968 0.940 0.949 0.936
55. C08B11.3 swsn-7 11608 7.651 0.918 0.988 0.979 0.988 0.964 0.976 0.892 0.946 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
56. C17G10.4 cdc-14 6262 7.65 0.963 0.971 0.982 0.971 0.953 0.977 0.901 0.932 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
57. Y54E5A.4 npp-4 6288 7.65 0.967 0.989 0.983 0.989 0.951 0.956 0.879 0.936 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
58. F48E8.3 F48E8.3 4186 7.649 0.949 0.952 0.958 0.952 0.980 0.982 0.935 0.941
59. W01A8.5 tofu-5 5678 7.649 0.944 0.984 0.978 0.984 0.992 0.918 0.960 0.889 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
60. C25A1.4 C25A1.4 15507 7.649 0.974 0.976 0.995 0.976 0.982 0.934 0.919 0.893
61. R12C12.2 ran-5 14517 7.649 0.976 0.981 0.984 0.981 0.950 0.981 0.908 0.888 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
62. Y37E3.15 npp-13 7250 7.648 0.950 0.971 0.952 0.971 0.965 0.989 0.900 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
63. K08E7.1 eak-7 18960 7.648 0.974 0.984 0.982 0.984 0.948 0.946 0.889 0.941 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
64. C16A11.3 C16A11.3 3250 7.648 0.970 0.975 0.973 0.975 0.983 0.933 0.917 0.922
65. C26D10.1 ran-3 11111 7.646 0.957 0.971 0.950 0.971 0.961 0.985 0.954 0.897 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
66. T22C1.3 T22C1.3 2305 7.645 0.967 0.973 0.988 0.973 0.980 0.938 0.900 0.926
67. C37A2.2 pqn-20 10913 7.645 0.954 0.986 0.972 0.986 0.938 0.968 0.880 0.961 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
68. T23G7.1 dpl-1 6620 7.643 0.976 0.983 0.980 0.983 0.961 0.928 0.930 0.902 Transcription factor dpl-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22703]
69. F32D1.10 mcm-7 21233 7.642 0.884 0.977 0.970 0.977 0.959 0.961 0.938 0.976 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
70. EEED8.1 tofu-6 3962 7.642 0.959 0.960 0.973 0.960 0.951 0.974 0.937 0.928 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
71. W08E3.1 snr-2 14849 7.642 0.973 0.967 0.967 0.967 0.966 0.962 0.955 0.885 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
72. Y39G10AR.7 ekl-7 7072 7.642 0.952 0.976 0.985 0.976 0.936 0.968 0.931 0.918
73. Y39G10AR.13 icp-1 3445 7.641 0.942 0.963 0.976 0.963 0.982 0.949 0.926 0.940 InCenP homolog [Source:RefSeq peptide;Acc:NP_001293363]
74. C49H3.10 xpo-3 9101 7.641 0.958 0.965 0.972 0.965 0.961 0.964 0.953 0.903 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
75. R74.8 R74.8 7722 7.641 0.964 0.989 0.973 0.989 0.968 0.923 0.962 0.873
76. K01G5.4 ran-1 32379 7.639 0.966 0.981 0.973 0.981 0.930 0.989 0.922 0.897 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
77. W02F12.6 sna-1 7338 7.638 0.965 0.980 0.981 0.980 0.944 0.967 0.876 0.945 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
78. T05C12.7 cct-1 41264 7.637 0.972 0.986 0.973 0.986 0.940 0.932 0.964 0.884 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
79. F52F12.4 lsl-1 4055 7.635 0.940 0.972 0.971 0.972 0.981 0.971 0.923 0.905 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
80. Y23H5B.6 Y23H5B.6 5886 7.634 0.957 0.959 0.971 0.959 0.964 0.967 0.940 0.917
81. W06H3.3 ctps-1 8363 7.633 0.951 0.955 0.948 0.955 0.973 0.989 0.935 0.927 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
82. C34D4.12 cyn-12 7363 7.632 0.970 0.981 0.959 0.981 0.977 0.957 0.963 0.844 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
83. ZK742.1 xpo-1 20741 7.632 0.938 0.975 0.986 0.975 0.959 0.960 0.881 0.958 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
84. B0035.3 B0035.3 4118 7.632 0.958 0.984 0.983 0.984 0.938 0.960 0.884 0.941
85. Y43F4B.4 npp-18 4780 7.63 0.960 0.977 0.967 0.977 0.968 0.956 0.905 0.920 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
86. T23B5.1 prmt-3 10677 7.63 0.949 0.983 0.991 0.983 0.952 0.943 0.887 0.942 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
87. T23G11.3 gld-1 41748 7.628 0.951 0.973 0.958 0.973 0.974 0.926 0.978 0.895 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
88. R53.6 psf-1 4721 7.627 0.940 0.964 0.961 0.964 0.991 0.968 0.918 0.921 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
89. ZK1010.3 frg-1 3533 7.627 0.962 0.975 0.984 0.975 0.959 0.956 0.939 0.877 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
90. Y40B1B.6 spr-5 6252 7.627 0.965 0.980 0.977 0.980 0.964 0.964 0.866 0.931 Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
91. F10G7.3 unc-85 5206 7.625 0.958 0.959 0.960 0.959 0.980 0.972 0.921 0.916 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
92. ZK1251.9 dcaf-1 10926 7.625 0.935 0.976 0.971 0.976 0.985 0.977 0.931 0.874 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
93. C01B10.9 C01B10.9 4049 7.625 0.939 0.934 0.982 0.934 0.987 0.979 0.923 0.947
94. F53A2.4 nud-1 7818 7.625 0.962 0.970 0.970 0.970 0.997 0.950 0.962 0.844 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
95. Y38C9A.2 cgp-1 11756 7.624 0.959 0.989 0.975 0.989 0.950 0.931 0.965 0.866 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
96. C06A1.5 rpb-6 7515 7.623 0.971 0.945 0.954 0.945 0.986 0.956 0.934 0.932 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
97. F28H1.3 aars-2 13537 7.622 0.948 0.966 0.976 0.966 0.947 0.974 0.902 0.943 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
98. T23H2.1 npp-12 12425 7.622 0.959 0.978 0.987 0.978 0.951 0.989 0.874 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
99. Y53C10A.12 hsf-1 7899 7.621 0.947 0.976 0.984 0.976 0.928 0.971 0.945 0.894 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
100. H20J04.8 mog-2 3084 7.62 0.971 0.955 0.973 0.955 0.972 0.980 0.906 0.908 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]

There are 3612 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA