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Results for Y113G7B.23

Gene ID Gene Name Reads Transcripts Annotation
Y113G7B.23 swsn-1 13766 Y113G7B.23a, Y113G7B.23b.1, Y113G7B.23b.2, Y113G7B.23c SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]

Genes with expression patterns similar to Y113G7B.23

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y113G7B.23 swsn-1 13766 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
2. K08D12.1 pbs-1 21677 7.805 0.985 0.987 0.952 0.987 0.984 0.966 0.955 0.989 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
3. T04A8.14 emb-5 11746 7.791 0.971 0.985 0.981 0.985 0.971 0.985 0.957 0.956 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
4. K10C3.2 ensa-1 19836 7.782 0.980 0.975 0.967 0.975 0.981 0.975 0.966 0.963 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
5. T01G1.3 sec-31 10504 7.78 0.962 0.977 0.990 0.977 0.988 0.978 0.936 0.972 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
6. Y38A8.2 pbs-3 18117 7.78 0.956 0.975 0.984 0.975 0.972 0.983 0.960 0.975 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
7. C18D11.4 rsp-8 18308 7.77 0.960 0.959 0.966 0.959 0.985 0.988 0.972 0.981 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
8. R144.4 wip-1 14168 7.762 0.958 0.974 0.978 0.974 0.979 0.980 0.952 0.967 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
9. C50C3.6 prp-8 19582 7.757 0.952 0.963 0.964 0.963 0.978 0.988 0.970 0.979 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
10. Y111B2A.18 rsp-3 43731 7.756 0.981 0.973 0.953 0.973 0.970 0.968 0.960 0.978 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
11. T10C6.4 srx-44 8454 7.756 0.965 0.966 0.969 0.966 0.991 0.974 0.950 0.975 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
12. ZK20.3 rad-23 35070 7.754 0.980 0.973 0.976 0.973 0.972 0.959 0.954 0.967
13. C47B2.4 pbs-2 19805 7.752 0.969 0.961 0.976 0.961 0.976 0.974 0.963 0.972 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
14. F22D6.3 nars-1 18624 7.752 0.971 0.979 0.952 0.979 0.969 0.970 0.958 0.974 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
15. Y54E10A.9 vbh-1 28746 7.751 0.948 0.967 0.954 0.967 0.984 0.968 0.979 0.984 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
16. F39B2.10 dnj-12 35162 7.749 0.959 0.970 0.958 0.970 0.976 0.978 0.970 0.968 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
17. Y102A5A.1 cand-1 11808 7.742 0.934 0.971 0.970 0.971 0.969 0.989 0.955 0.983 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
18. T05F1.6 hsr-9 13312 7.74 0.967 0.983 0.983 0.983 0.980 0.943 0.939 0.962
19. C09G4.3 cks-1 17852 7.739 0.962 0.971 0.968 0.971 0.977 0.972 0.955 0.963 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
20. F39B2.2 uev-1 13597 7.739 0.953 0.967 0.970 0.967 0.984 0.960 0.952 0.986 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
21. F39H11.5 pbs-7 13631 7.737 0.946 0.978 0.977 0.978 0.973 0.957 0.955 0.973 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
22. F42A6.7 hrp-1 28201 7.734 0.985 0.970 0.983 0.970 0.955 0.958 0.931 0.982 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
23. Y116A8C.35 uaf-2 13808 7.734 0.967 0.963 0.950 0.963 0.981 0.967 0.966 0.977 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
24. T12D8.3 acbp-5 6816 7.734 0.964 0.983 0.956 0.983 0.979 0.974 0.943 0.952 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
25. C15H11.4 dhs-22 21674 7.734 0.965 0.971 0.975 0.971 0.967 0.979 0.938 0.968 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
26. Y56A3A.20 ccf-1 18463 7.732 0.942 0.972 0.980 0.972 0.970 0.980 0.956 0.960 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
27. Y47G6A.20 rnp-6 5542 7.731 0.974 0.977 0.954 0.977 0.947 0.970 0.949 0.983 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
28. T12D8.6 mlc-5 19567 7.726 0.957 0.976 0.966 0.976 0.976 0.975 0.926 0.974 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
29. K02F2.1 dpf-3 11465 7.722 0.954 0.977 0.985 0.977 0.976 0.964 0.967 0.922 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
30. C47D12.6 tars-1 23488 7.721 0.965 0.965 0.934 0.965 0.978 0.967 0.961 0.986 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
31. F33D11.11 vpr-1 18001 7.717 0.961 0.957 0.965 0.957 0.973 0.985 0.956 0.963 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
32. R07G3.5 pgam-5 11646 7.717 0.976 0.957 0.961 0.957 0.971 0.976 0.963 0.956 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
33. Y40B1B.5 eif-3.J 15061 7.716 0.969 0.954 0.955 0.954 0.976 0.978 0.954 0.976 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
34. F44A2.1 tag-153 16535 7.715 0.966 0.973 0.983 0.973 0.970 0.953 0.953 0.944
35. R02D3.5 fnta-1 5258 7.715 0.970 0.967 0.973 0.967 0.988 0.959 0.954 0.937 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
36. C39E9.14 dli-1 5650 7.715 0.945 0.969 0.973 0.969 0.965 0.971 0.961 0.962 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
37. F18E2.3 scc-3 13464 7.713 0.966 0.981 0.975 0.981 0.969 0.921 0.971 0.949 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
38. D2089.1 rsp-7 11057 7.713 0.951 0.977 0.962 0.977 0.970 0.972 0.934 0.970 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
39. C09G12.9 tsg-101 9451 7.712 0.967 0.962 0.971 0.962 0.972 0.954 0.964 0.960 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
40. F26E4.1 sur-6 16191 7.711 0.969 0.990 0.966 0.990 0.961 0.948 0.925 0.962 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
41. D1054.14 prp-38 6504 7.711 0.948 0.979 0.978 0.979 0.975 0.950 0.943 0.959 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
42. ZK616.6 perm-3 16186 7.709 0.958 0.959 0.947 0.959 0.974 0.985 0.954 0.973 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
43. C02B10.5 C02B10.5 9171 7.709 0.981 0.968 0.978 0.968 0.942 0.962 0.941 0.969
44. F58B6.3 par-2 3914 7.707 0.976 0.985 0.967 0.985 0.966 0.932 0.952 0.944
45. Y71D11A.2 smr-1 4976 7.707 0.972 0.957 0.953 0.957 0.967 0.978 0.963 0.960 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
46. F28B3.7 him-1 18274 7.704 0.952 0.974 0.978 0.974 0.954 0.974 0.952 0.946 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
47. F41E6.4 smk-1 22394 7.704 0.948 0.969 0.968 0.969 0.976 0.958 0.954 0.962 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
48. CD4.6 pas-6 18332 7.703 0.980 0.967 0.944 0.967 0.982 0.948 0.943 0.972 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
49. C36B1.8 gls-1 8617 7.701 0.958 0.956 0.977 0.956 0.981 0.963 0.940 0.970 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
50. T10F2.4 prp-19 11298 7.699 0.965 0.970 0.964 0.970 0.970 0.963 0.945 0.952 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
51. F56A8.6 cpf-2 2730 7.698 0.953 0.962 0.957 0.962 0.960 0.967 0.967 0.970 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
52. T17E9.2 nmt-1 8017 7.695 0.934 0.964 0.950 0.964 0.982 0.966 0.951 0.984 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
53. F58G11.1 letm-1 13414 7.695 0.959 0.967 0.975 0.967 0.953 0.963 0.937 0.974 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
54. C25A1.5 C25A1.5 9135 7.695 0.975 0.960 0.971 0.960 0.975 0.961 0.942 0.951
55. F39B2.11 mtx-1 8526 7.695 0.971 0.963 0.964 0.963 0.974 0.975 0.933 0.952 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
56. K11D12.2 pqn-51 15951 7.693 0.965 0.982 0.982 0.982 0.944 0.986 0.890 0.962 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
57. C18A3.5 tiar-1 25400 7.693 0.990 0.978 0.970 0.978 0.947 0.960 0.912 0.958 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
58. Y39G10AR.9 Y39G10AR.9 3972 7.69 0.944 0.974 0.922 0.974 0.974 0.977 0.944 0.981
59. F37E3.1 ncbp-1 5649 7.689 0.967 0.973 0.974 0.973 0.943 0.955 0.949 0.955 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
60. F38H4.9 let-92 25368 7.689 0.972 0.977 0.978 0.977 0.974 0.926 0.925 0.960 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
61. Y73F8A.34 tag-349 7966 7.688 0.966 0.974 0.968 0.974 0.954 0.945 0.952 0.955
62. F13G3.4 dylt-1 21345 7.688 0.946 0.969 0.972 0.969 0.954 0.983 0.928 0.967 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
63. Y48G8AL.6 smg-2 12561 7.687 0.942 0.957 0.956 0.957 0.963 0.970 0.965 0.977 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
64. ZK858.1 gld-4 14162 7.686 0.969 0.952 0.948 0.952 0.985 0.980 0.948 0.952 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
65. Y73B6BL.6 sqd-1 41708 7.686 0.953 0.954 0.954 0.954 0.970 0.977 0.956 0.968 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
66. ZK328.5 npp-10 7652 7.685 0.953 0.972 0.961 0.972 0.986 0.944 0.966 0.931 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
67. T06D8.6 cchl-1 26292 7.684 0.986 0.967 0.960 0.967 0.968 0.912 0.957 0.967 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
68. F59B2.7 rab-6.1 10749 7.683 0.951 0.950 0.989 0.950 0.978 0.934 0.971 0.960 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
69. F08F8.3 kap-1 31437 7.683 0.964 0.973 0.958 0.973 0.960 0.974 0.919 0.962 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
70. K12D12.1 top-2 18694 7.683 0.962 0.980 0.974 0.980 0.944 0.930 0.951 0.962 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
71. W03F9.5 ttb-1 8682 7.682 0.977 0.974 0.984 0.974 0.964 0.951 0.925 0.933 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
72. H19N07.1 erfa-3 19869 7.681 0.959 0.964 0.943 0.964 0.964 0.988 0.942 0.957 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
73. T06D8.8 rpn-9 11282 7.68 0.968 0.955 0.968 0.955 0.972 0.951 0.949 0.962 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
74. F36A4.7 ama-1 13620 7.679 0.932 0.959 0.965 0.959 0.972 0.969 0.954 0.969 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
75. C08B11.5 sap-49 10553 7.679 0.977 0.970 0.958 0.970 0.962 0.962 0.941 0.939 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
76. C36B1.3 rpb-3 4442 7.678 0.969 0.978 0.955 0.978 0.954 0.947 0.948 0.949 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
77. R05D11.3 ran-4 15494 7.677 0.965 0.968 0.959 0.968 0.963 0.981 0.912 0.961 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
78. Y110A7A.14 pas-3 6831 7.677 0.945 0.960 0.967 0.960 0.963 0.952 0.955 0.975 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
79. C27B7.1 spr-2 14958 7.677 0.972 0.979 0.976 0.979 0.952 0.943 0.927 0.949 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
80. T01G9.4 npp-2 5361 7.675 0.967 0.976 0.957 0.976 0.972 0.894 0.960 0.973 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
81. T21E12.4 dhc-1 20370 7.675 0.969 0.972 0.969 0.972 0.983 0.931 0.930 0.949 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
82. C43E11.1 acin-1 7781 7.673 0.936 0.977 0.972 0.977 0.968 0.940 0.958 0.945 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
83. C36B1.4 pas-4 13140 7.673 0.939 0.962 0.977 0.962 0.978 0.962 0.938 0.955 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
84. Y67D8C.5 eel-1 30623 7.672 0.949 0.948 0.962 0.948 0.975 0.949 0.964 0.977 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
85. Y53C12A.4 mop-25.2 7481 7.672 0.971 0.984 0.969 0.984 0.950 0.963 0.899 0.952 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
86. F40G9.3 ubc-20 16785 7.672 0.954 0.960 0.961 0.960 0.975 0.965 0.915 0.982 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
87. F36D4.3 hum-2 16493 7.671 0.954 0.980 0.969 0.980 0.960 0.950 0.950 0.928 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
88. T12D8.8 hip-1 18283 7.669 0.961 0.939 0.924 0.939 0.973 0.976 0.970 0.987 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
89. D1014.3 snap-1 16776 7.669 0.974 0.987 0.978 0.987 0.969 0.935 0.938 0.901 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
90. F19B6.2 ufd-1 15357 7.669 0.968 0.960 0.949 0.960 0.965 0.965 0.950 0.952 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
91. Y55D9A.1 efa-6 10012 7.668 0.942 0.967 0.969 0.967 0.966 0.940 0.963 0.954 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
92. K01C8.10 cct-4 15077 7.667 0.966 0.964 0.970 0.964 0.937 0.921 0.968 0.977 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
93. Y57G7A.10 emc-2 4837 7.667 0.958 0.951 0.952 0.951 0.969 0.951 0.966 0.969 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_001254028]
94. M106.4 gmps-1 12232 7.667 0.948 0.950 0.936 0.950 0.982 0.989 0.965 0.947 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
95. Y61A9LA.8 sut-2 11388 7.667 0.965 0.956 0.957 0.956 0.967 0.946 0.936 0.984 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
96. M7.1 let-70 85699 7.663 0.967 0.968 0.954 0.968 0.954 0.943 0.945 0.964 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
97. C25D7.8 otub-1 7941 7.663 0.973 0.979 0.966 0.979 0.933 0.985 0.900 0.948 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
98. D1081.9 D1081.9 3792 7.663 0.972 0.958 0.970 0.958 0.960 0.952 0.949 0.944
99. T05H4.6 erfa-1 12542 7.662 0.919 0.942 0.949 0.942 0.977 0.989 0.960 0.984 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
100. F32A5.1 ada-2 8343 7.662 0.951 0.977 0.968 0.977 0.973 0.948 0.943 0.925 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA