C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54G11A.11

Gene ID Gene Name Reads Transcripts Annotation
Y54G11A.11 Y54G11A.11 14933 Y54G11A.11.1, Y54G11A.11.2 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]

Genes with expression patterns similar to Y54G11A.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54G11A.11 Y54G11A.11 14933 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
2. T19B4.2 npp-7 13073 7.659 0.915 0.980 0.985 0.980 0.950 0.944 0.966 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
3. Y56A3A.20 ccf-1 18463 7.639 0.934 0.980 0.983 0.980 0.981 0.934 0.897 0.950 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
4. ZK742.1 xpo-1 20741 7.638 0.940 0.976 0.977 0.976 0.933 0.967 0.907 0.962 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
5. T04A8.10 sel-13 3109 7.625 0.967 0.968 0.976 0.968 0.943 0.929 0.921 0.953 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
6. F58E10.3 ddx-17 15107 7.619 0.962 0.972 0.988 0.972 0.946 0.941 0.902 0.936 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
7. Y54E5A.4 npp-4 6288 7.618 0.938 0.989 0.982 0.989 0.933 0.936 0.919 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
8. C27B7.1 spr-2 14958 7.618 0.946 0.989 0.978 0.989 0.948 0.949 0.897 0.922 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
9. F32A5.7 lsm-4 3785 7.61 0.952 0.980 0.975 0.980 0.958 0.951 0.905 0.909 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
10. K11D12.2 pqn-51 15951 7.606 0.929 0.990 0.983 0.990 0.939 0.931 0.919 0.925 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
11. Y111B2A.18 rsp-3 43731 7.606 0.938 0.980 0.960 0.980 0.960 0.903 0.935 0.950 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
12. T06A10.4 lsy-13 7631 7.605 0.883 0.982 0.979 0.982 0.946 0.962 0.949 0.922
13. F41H10.4 F41H10.4 3295 7.603 0.948 0.976 0.979 0.976 0.942 0.968 0.924 0.890
14. K10C3.2 ensa-1 19836 7.595 0.949 0.987 0.968 0.987 0.936 0.921 0.894 0.953 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
15. K08E7.1 eak-7 18960 7.595 0.941 0.984 0.966 0.984 0.921 0.962 0.891 0.946 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
16. F28H1.3 aars-2 13537 7.594 0.931 0.965 0.980 0.965 0.934 0.947 0.910 0.962 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
17. Y43F4B.4 npp-18 4780 7.594 0.937 0.981 0.954 0.981 0.913 0.974 0.929 0.925 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
18. T19A6.3 nepr-1 6606 7.591 0.955 0.964 0.975 0.964 0.965 0.935 0.902 0.931 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
19. T24F1.1 raga-1 16171 7.591 0.957 0.982 0.970 0.982 0.921 0.917 0.930 0.932 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
20. T08B2.9 fars-1 12650 7.59 0.921 0.959 0.967 0.959 0.930 0.926 0.953 0.975 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
21. F22D6.3 nars-1 18624 7.59 0.919 0.982 0.975 0.982 0.961 0.940 0.891 0.940 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
22. Y54E2A.3 tac-1 6308 7.59 0.940 0.964 0.939 0.964 0.963 0.920 0.941 0.959 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
23. F42A6.7 hrp-1 28201 7.587 0.932 0.980 0.986 0.980 0.955 0.890 0.922 0.942 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
24. F08F8.3 kap-1 31437 7.587 0.928 0.984 0.971 0.984 0.946 0.907 0.917 0.950 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
25. Y38A8.3 ulp-2 7403 7.584 0.925 0.983 0.976 0.983 0.950 0.941 0.883 0.943 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
26. C15H11.4 dhs-22 21674 7.583 0.951 0.970 0.983 0.970 0.939 0.915 0.900 0.955 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
27. C33H5.12 rsp-6 23342 7.582 0.948 0.969 0.977 0.969 0.963 0.934 0.883 0.939 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
28. B0035.3 B0035.3 4118 7.582 0.955 0.976 0.979 0.976 0.928 0.959 0.891 0.918
29. ZK1010.3 frg-1 3533 7.582 0.941 0.970 0.985 0.970 0.906 0.920 0.943 0.947 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
30. C08B11.5 sap-49 10553 7.581 0.933 0.979 0.969 0.979 0.956 0.951 0.923 0.891 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
31. C52E4.6 cyl-1 6405 7.579 0.911 0.982 0.966 0.982 0.933 0.940 0.914 0.951 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
32. F33D4.7 emc-6 6534 7.578 0.916 0.942 0.974 0.942 0.951 0.943 0.946 0.964 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
33. R05D11.3 ran-4 15494 7.578 0.918 0.979 0.974 0.979 0.941 0.932 0.890 0.965 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
34. T19C3.8 fem-2 9225 7.576 0.957 0.979 0.982 0.979 0.889 0.958 0.866 0.966 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
35. T12E12.4 drp-1 7694 7.576 0.946 0.982 0.966 0.982 0.964 0.898 0.901 0.937 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
36. Y113G7B.23 swsn-1 13766 7.575 0.943 0.983 0.984 0.983 0.946 0.926 0.858 0.952 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
37. F26F4.10 rars-1 9971 7.573 0.931 0.946 0.965 0.946 0.966 0.912 0.962 0.945 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
38. K01G5.4 ran-1 32379 7.57 0.951 0.985 0.958 0.985 0.940 0.910 0.918 0.923 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
39. ZK1098.5 trpp-3 3389 7.57 0.921 0.957 0.958 0.957 0.951 0.959 0.912 0.955 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
40. T21D12.3 pqbp-1.1 5755 7.568 0.950 0.969 0.968 0.969 0.956 0.910 0.949 0.897 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
41. F37E3.1 ncbp-1 5649 7.567 0.954 0.982 0.966 0.982 0.952 0.895 0.876 0.960 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
42. Y34D9A.1 mrpl-38 5291 7.567 0.940 0.960 0.957 0.960 0.956 0.933 0.909 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
43. F54C8.5 rheb-1 6358 7.567 0.933 0.973 0.960 0.973 0.927 0.962 0.886 0.953 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
44. R144.4 wip-1 14168 7.566 0.931 0.984 0.973 0.984 0.946 0.860 0.918 0.970 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
45. F32H2.4 thoc-3 3861 7.565 0.931 0.967 0.970 0.967 0.953 0.953 0.904 0.920 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
46. R12C12.2 ran-5 14517 7.563 0.940 0.981 0.972 0.981 0.895 0.937 0.924 0.933 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
47. C02B10.5 C02B10.5 9171 7.559 0.942 0.961 0.974 0.961 0.920 0.949 0.924 0.928
48. F57B10.11 bag-1 3395 7.556 0.930 0.956 0.958 0.956 0.943 0.934 0.945 0.934 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
49. F18A1.3 lir-1 2995 7.556 0.937 0.967 0.945 0.967 0.949 0.921 0.921 0.949 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
50. ZK616.6 perm-3 16186 7.555 0.924 0.969 0.961 0.969 0.933 0.942 0.931 0.926 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
51. F23F1.1 nfyc-1 9983 7.554 0.943 0.979 0.972 0.979 0.916 0.915 0.934 0.916 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
52. H19N07.1 erfa-3 19869 7.553 0.915 0.969 0.963 0.969 0.953 0.916 0.888 0.980 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
53. T12G3.5 mrpl-51 5192 7.552 0.935 0.957 0.954 0.957 0.937 0.970 0.912 0.930 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
54. ZK1127.4 ZK1127.4 3088 7.552 0.971 0.957 0.978 0.957 0.953 0.923 0.901 0.912 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
55. K03B4.2 K03B4.2 21796 7.55 0.921 0.982 0.943 0.982 0.930 0.944 0.937 0.911
56. C18A3.5 tiar-1 25400 7.55 0.944 0.990 0.978 0.990 0.942 0.905 0.842 0.959 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
57. F46B6.3 smg-4 4959 7.55 0.936 0.975 0.970 0.975 0.977 0.917 0.871 0.929 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
58. C36B1.3 rpb-3 4442 7.55 0.951 0.984 0.955 0.984 0.941 0.929 0.888 0.918 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
59. Y47G6A.20 rnp-6 5542 7.549 0.932 0.982 0.957 0.982 0.964 0.925 0.861 0.946 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
60. T04A8.14 emb-5 11746 7.549 0.930 0.987 0.974 0.987 0.953 0.933 0.863 0.922 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
61. K02F3.11 rnp-5 6205 7.548 0.946 0.972 0.972 0.972 0.958 0.950 0.868 0.910 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
62. T10C6.4 srx-44 8454 7.547 0.942 0.974 0.968 0.974 0.950 0.913 0.903 0.923 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
63. F23B12.6 fntb-1 4392 7.547 0.927 0.973 0.970 0.973 0.937 0.938 0.882 0.947 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
64. Y97E10AR.5 rpb-9 3598 7.544 0.958 0.964 0.958 0.964 0.935 0.924 0.935 0.906 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
65. C05C8.6 hpo-9 8263 7.543 0.937 0.985 0.967 0.985 0.910 0.954 0.922 0.883
66. C18D11.4 rsp-8 18308 7.543 0.935 0.965 0.963 0.965 0.961 0.901 0.890 0.963 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
67. T18H9.6 mdt-27 5418 7.542 0.897 0.983 0.978 0.983 0.889 0.932 0.924 0.956 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
68. D1022.1 ubc-6 9722 7.541 0.906 0.981 0.966 0.981 0.915 0.915 0.902 0.975 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
69. Y110A7A.8 prp-31 4436 7.541 0.954 0.968 0.955 0.968 0.965 0.919 0.964 0.848 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
70. C39E9.14 dli-1 5650 7.54 0.928 0.966 0.976 0.966 0.972 0.884 0.882 0.966 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
71. H17B01.4 emc-1 9037 7.54 0.926 0.968 0.956 0.968 0.914 0.980 0.873 0.955 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
72. T26A5.7 set-1 6948 7.54 0.914 0.969 0.961 0.969 0.936 0.904 0.957 0.930 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
73. K02F2.3 teg-4 3873 7.538 0.916 0.980 0.968 0.980 0.962 0.894 0.937 0.901 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
74. F13G3.4 dylt-1 21345 7.537 0.935 0.966 0.976 0.966 0.926 0.921 0.924 0.923 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
75. W02B12.3 rsp-1 9235 7.536 0.941 0.968 0.978 0.968 0.937 0.923 0.881 0.940 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
76. C36B1.8 gls-1 8617 7.535 0.917 0.977 0.969 0.977 0.965 0.876 0.893 0.961 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
77. T23H2.1 npp-12 12425 7.535 0.933 0.977 0.973 0.977 0.924 0.938 0.893 0.920 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
78. Y40B1B.5 eif-3.J 15061 7.535 0.901 0.961 0.975 0.961 0.963 0.914 0.906 0.954 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
79. T05H4.6 erfa-1 12542 7.534 0.890 0.951 0.965 0.951 0.943 0.954 0.916 0.964 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
80. T10B11.3 ztf-4 5161 7.533 0.911 0.975 0.973 0.975 0.909 0.956 0.913 0.921 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
81. T01E8.6 mrps-14 9328 7.532 0.919 0.970 0.962 0.970 0.931 0.943 0.919 0.918 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
82. ZK863.6 dpy-30 16177 7.532 0.927 0.979 0.968 0.979 0.902 0.924 0.885 0.968 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
83. F56F3.1 ifet-1 25772 7.531 0.880 0.974 0.981 0.974 0.909 0.963 0.934 0.916 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
84. Y39G10AR.9 Y39G10AR.9 3972 7.531 0.898 0.980 0.943 0.980 0.953 0.934 0.910 0.933
85. T17E9.2 nmt-1 8017 7.53 0.898 0.972 0.966 0.972 0.953 0.960 0.867 0.942 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
86. R02D3.5 fnta-1 5258 7.53 0.950 0.974 0.967 0.974 0.958 0.914 0.872 0.921 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
87. C48E7.3 lpd-2 10330 7.529 0.944 0.981 0.976 0.981 0.925 0.891 0.964 0.867 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
88. C06A5.1 inst-1 5068 7.529 0.926 0.944 0.965 0.944 0.948 0.950 0.930 0.922 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
89. ZK686.4 snu-23 9040 7.528 0.920 0.982 0.963 0.982 0.942 0.910 0.866 0.963 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
90. R07E5.14 rnp-4 11659 7.527 0.943 0.982 0.970 0.982 0.868 0.934 0.928 0.920 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
91. W01G7.3 rpb-11 7826 7.526 0.935 0.961 0.970 0.961 0.943 0.940 0.921 0.895 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
92. W04D2.5 mrps-11 5757 7.524 0.903 0.950 0.968 0.950 0.928 0.955 0.934 0.936 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
93. F26H11.2 nurf-1 13015 7.524 0.941 0.983 0.980 0.983 0.942 0.953 0.898 0.844 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
94. Y102A5A.1 cand-1 11808 7.523 0.886 0.978 0.976 0.978 0.963 0.916 0.897 0.929 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
95. C53A5.3 hda-1 18413 7.523 0.943 0.981 0.972 0.981 0.938 0.907 0.891 0.910 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
96. C25D7.8 otub-1 7941 7.523 0.933 0.978 0.974 0.978 0.926 0.901 0.880 0.953 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
97. ZK652.10 tag-307 3741 7.523 0.964 0.961 0.919 0.961 0.966 0.963 0.854 0.935
98. F36A2.1 cids-2 4551 7.523 0.919 0.976 0.956 0.976 0.952 0.898 0.936 0.910 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
99. F25B3.6 rtfo-1 11965 7.522 0.919 0.980 0.933 0.980 0.925 0.951 0.944 0.890 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
100. F28D9.1 rsr-1 4282 7.521 0.923 0.985 0.957 0.985 0.929 0.899 0.924 0.919 SR protein related [Source:RefSeq peptide;Acc:NP_492875]

There are 3087 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA