C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F25H5.6

Gene ID Gene Name Reads Transcripts Annotation
F25H5.6 mrpl-54 2630 F25H5.6.1, F25H5.6.2 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492455]

Genes with expression patterns similar to F25H5.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F25H5.6 mrpl-54 2630 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492455]
2. W06H3.3 ctps-1 8363 7.621 0.950 0.915 0.949 0.915 0.976 0.978 0.954 0.984 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
3. F26F4.11 rpb-8 7601 7.595 0.931 0.901 0.963 0.901 0.973 0.987 0.963 0.976 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
4. T01E8.6 mrps-14 9328 7.562 0.936 0.920 0.941 0.920 0.985 0.960 0.947 0.953 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
5. R12E2.12 mrps-6 4708 7.549 0.948 0.910 0.946 0.910 0.974 0.978 0.943 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
6. C34E10.11 mrps-26 4649 7.545 0.955 0.933 0.936 0.933 0.935 0.949 0.955 0.949 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
7. C34E10.2 gop-2 5684 7.537 0.900 0.897 0.973 0.897 0.969 0.973 0.955 0.973 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
8. Y73B6BL.32 lsm-8 11002 7.533 0.941 0.901 0.967 0.901 0.973 0.968 0.924 0.958 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
9. Y116A8C.42 snr-1 17062 7.526 0.932 0.908 0.947 0.908 0.975 0.962 0.936 0.958 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
10. ZK652.1 snr-5 5993 7.514 0.951 0.917 0.937 0.917 0.963 0.965 0.957 0.907 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
11. Y49E10.15 snr-6 8505 7.512 0.919 0.924 0.876 0.924 0.972 0.984 0.941 0.972 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
12. Y62E10A.11 mdt-9 5971 7.511 0.933 0.878 0.971 0.878 0.979 0.983 0.937 0.952 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
13. C06A1.5 rpb-6 7515 7.51 0.911 0.919 0.953 0.919 0.985 0.965 0.906 0.952 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
14. C05D11.10 mrps-17 4613 7.499 0.933 0.898 0.916 0.898 0.966 0.967 0.961 0.960 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
15. Y54E5A.6 Y54E5A.6 770 7.498 0.936 0.888 0.954 0.888 0.971 0.978 0.915 0.968
16. W08E3.1 snr-2 14849 7.488 0.884 0.893 0.962 0.893 0.936 0.987 0.954 0.979 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
17. F13G3.11 mrpl-13 6024 7.487 0.933 0.931 0.866 0.931 0.965 0.986 0.919 0.956 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
18. T21B10.1 mrpl-50 14595 7.486 0.932 0.912 0.956 0.912 0.960 0.958 0.922 0.934 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
19. F56B3.8 mrpl-2 3195 7.484 0.882 0.902 0.924 0.902 0.987 0.964 0.949 0.974 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
20. F43C1.6 mrpl-21 2778 7.484 0.971 0.894 0.908 0.894 0.989 0.980 0.893 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
21. B0205.11 mrpl-9 9162 7.481 0.940 0.864 0.962 0.864 0.980 0.954 0.962 0.955 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
22. D2023.5 mpst-1 10328 7.479 0.914 0.884 0.951 0.884 0.972 0.987 0.915 0.972 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
23. Y37E3.3 rpb-10 4051 7.479 0.947 0.881 0.915 0.881 0.985 0.976 0.946 0.948 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
24. C14A4.14 mrps-22 7966 7.476 0.921 0.930 0.926 0.930 0.981 0.976 0.865 0.947 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
25. K08F4.2 gtbp-1 25222 7.473 0.906 0.912 0.959 0.912 0.979 0.950 0.912 0.943 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
26. T03D8.2 mrps-12 8253 7.472 0.928 0.925 0.920 0.925 0.964 0.960 0.917 0.933 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
27. T28D9.10 snr-3 9995 7.466 0.936 0.892 0.922 0.892 0.983 0.978 0.936 0.927 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
28. C14A4.5 crn-5 1759 7.465 0.926 0.899 0.943 0.899 0.930 0.963 0.956 0.949 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
29. Y23H5B.6 Y23H5B.6 5886 7.458 0.906 0.911 0.948 0.911 0.954 0.953 0.933 0.942
30. Y54E10A.7 mrpl-17 2791 7.457 0.921 0.926 0.927 0.926 0.973 0.954 0.937 0.893 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
31. T23B12.3 mrps-2 5434 7.457 0.932 0.906 0.948 0.906 0.979 0.958 0.922 0.906 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
32. T21B10.7 cct-2 13999 7.456 0.894 0.908 0.958 0.908 0.965 0.954 0.923 0.946 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
33. F59A2.3 cri-3 15077 7.456 0.931 0.914 0.868 0.914 0.965 0.975 0.946 0.943 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
34. F58E10.3 ddx-17 15107 7.454 0.874 0.907 0.977 0.907 0.972 0.959 0.925 0.933 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
35. F53F10.5 npp-11 3378 7.453 0.838 0.885 0.973 0.885 0.977 0.971 0.961 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
36. Y40G12A.1 ubh-3 4142 7.449 0.925 0.900 0.955 0.900 0.940 0.988 0.882 0.959 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
37. C25A1.4 C25A1.4 15507 7.446 0.880 0.907 0.948 0.907 0.973 0.967 0.949 0.915
38. H20J04.8 mog-2 3084 7.446 0.943 0.870 0.963 0.870 0.919 0.959 0.950 0.972 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
39. T23H2.1 npp-12 12425 7.444 0.896 0.887 0.962 0.887 0.976 0.970 0.910 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
40. F53A2.4 nud-1 7818 7.444 0.898 0.872 0.962 0.872 0.953 0.977 0.937 0.973 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
41. C25A1.13 mrpl-34 3170 7.441 0.902 0.882 0.942 0.882 0.971 0.952 0.958 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
42. Y71F9B.4 snr-7 13542 7.439 0.945 0.868 0.928 0.868 0.966 0.972 0.928 0.964 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
43. F22B5.9 fars-3 7209 7.437 0.905 0.903 0.931 0.903 0.971 0.959 0.936 0.929 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
44. R09B3.5 mag-1 7496 7.43 0.935 0.880 0.952 0.880 0.967 0.954 0.911 0.951 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
45. C26D10.1 ran-3 11111 7.43 0.849 0.909 0.958 0.909 0.966 0.974 0.882 0.983 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
46. Y57G11C.34 mrps-7 3450 7.429 0.953 0.888 0.922 0.888 0.977 0.961 0.908 0.932 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
47. C27B7.5 C27B7.5 6331 7.428 0.908 0.922 0.948 0.922 0.963 0.941 0.872 0.952
48. Y50D7A.9 taco-1 5949 7.426 0.911 0.897 0.908 0.897 0.975 0.967 0.903 0.968 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
49. B0261.4 mrpl-47 8210 7.426 0.932 0.888 0.931 0.888 0.982 0.941 0.893 0.971 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
50. Y47D3A.26 smc-3 6256 7.425 0.831 0.922 0.955 0.922 0.944 0.949 0.938 0.964 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
51. C26B2.6 elpc-4 3600 7.424 0.922 0.852 0.938 0.852 0.954 0.982 0.955 0.969 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
52. F21C3.4 rde-2 6286 7.424 0.942 0.880 0.961 0.880 0.948 0.967 0.877 0.969
53. W06E11.4 sbds-1 6701 7.423 0.876 0.876 0.959 0.876 0.962 0.972 0.917 0.985 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
54. F55F10.1 F55F10.1 9760 7.422 0.887 0.928 0.931 0.928 0.958 0.905 0.937 0.948 Midasin [Source:RefSeq peptide;Acc:NP_500551]
55. K07A12.7 mrps-15 6325 7.42 0.933 0.939 0.938 0.939 0.963 0.895 0.898 0.915 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
56. H20J04.5 pfd-2 8082 7.419 0.922 0.907 0.924 0.907 0.981 0.928 0.895 0.955 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
57. Y73B6BL.33 hrpf-2 4443 7.417 0.843 0.880 0.976 0.880 0.977 0.962 0.961 0.938 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
58. F18A1.8 pid-1 3751 7.416 0.921 0.907 0.929 0.907 0.957 0.969 0.915 0.911 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
59. Y92H12BR.8 mrpl-15 6344 7.416 0.928 0.888 0.931 0.888 0.963 0.970 0.867 0.981 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
60. F33D4.8 mrps-24 2853 7.415 0.915 0.889 0.920 0.889 0.973 0.967 0.921 0.941 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
61. K08E7.1 eak-7 18960 7.415 0.862 0.891 0.954 0.891 0.973 0.946 0.940 0.958 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
62. T28D9.2 rsp-5 6460 7.414 0.892 0.899 0.959 0.899 0.963 0.972 0.898 0.932 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
63. T13H5.5 mrps-18B 3430 7.41 0.909 0.888 0.922 0.888 0.965 0.973 0.879 0.986 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
64. Y39B6A.35 tgt-2 2364 7.408 0.911 0.903 0.899 0.903 0.956 0.935 0.948 0.953 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
65. T10B5.5 cct-7 24616 7.408 0.891 0.907 0.926 0.907 0.972 0.925 0.937 0.943 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
66. T24H7.1 phb-2 28775 7.408 0.938 0.906 0.874 0.906 0.973 0.971 0.917 0.923 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
67. T02G5.9 kars-1 9763 7.407 0.886 0.907 0.931 0.907 0.978 0.950 0.930 0.918 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
68. ZK863.6 dpy-30 16177 7.407 0.877 0.884 0.971 0.884 0.982 0.925 0.941 0.943 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
69. B0464.7 baf-1 10161 7.406 0.899 0.902 0.916 0.902 0.981 0.933 0.904 0.969 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
70. F56D1.3 mrps-16 2309 7.405 0.924 0.887 0.951 0.887 0.966 0.969 0.877 0.944 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
71. C48B6.3 C48B6.3 6610 7.402 0.932 0.852 0.958 0.852 0.962 0.988 0.882 0.976
72. F28H1.3 aars-2 13537 7.401 0.877 0.902 0.960 0.902 0.984 0.948 0.918 0.910 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
73. C15H11.6 nxf-2 1545 7.399 0.904 0.913 0.935 0.913 0.970 0.945 0.892 0.927 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
74. F13G3.4 dylt-1 21345 7.399 0.939 0.897 0.969 0.897 0.963 0.891 0.894 0.949 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
75. C14A4.2 dap-3 1959 7.398 0.889 0.904 0.925 0.904 0.952 0.983 0.949 0.892 mammalian cell Death Associated Protein related [Source:RefSeq peptide;Acc:NP_496280]
76. C42C1.13 C42C1.13 1509 7.398 0.917 0.855 0.930 0.855 0.962 0.960 0.949 0.970 Protein-lysine methyltransferase C42C1.13 [Source:UniProtKB/Swiss-Prot;Acc:A7IQW5]
77. M88.7 cisd-3.1 5713 7.397 0.910 0.880 0.956 0.880 0.941 0.936 0.945 0.949 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
78. K11H3.6 mrpl-36 7328 7.396 0.869 0.879 0.947 0.879 0.970 0.959 0.955 0.938 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
79. C01A2.3 oxa-1 2783 7.396 0.912 0.895 0.873 0.895 0.964 0.987 0.926 0.944 OXA mitochondrial inner membrane insertase homolog [Source:RefSeq peptide;Acc:NP_493356]
80. ZC410.2 mppb-1 3991 7.395 0.884 0.893 0.919 0.893 0.973 0.954 0.928 0.951 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
81. K02F2.4 ulp-5 3433 7.393 0.908 0.908 0.938 0.908 0.981 0.945 0.881 0.924 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
82. C30C11.1 mrpl-32 5238 7.393 0.934 0.864 0.924 0.864 0.982 0.958 0.909 0.958 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
83. C52E4.3 snr-4 19308 7.393 0.923 0.910 0.947 0.910 0.980 0.938 0.855 0.930 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
84. F33D4.5 mrpl-1 5337 7.391 0.916 0.891 0.962 0.891 0.976 0.957 0.861 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
85. C34E10.5 prmt-5 12277 7.39 0.881 0.914 0.966 0.914 0.960 0.937 0.879 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
86. F32H2.1 snpc-4 7581 7.39 0.892 0.892 0.938 0.892 0.971 0.947 0.909 0.949 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
87. R07E5.14 rnp-4 11659 7.388 0.880 0.854 0.944 0.854 0.975 0.978 0.950 0.953 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
88. Y49A3A.5 cyn-1 6411 7.387 0.929 0.848 0.910 0.848 0.988 0.973 0.946 0.945 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
89. R53.2 dtmk-1 6821 7.386 0.862 0.895 0.952 0.895 0.986 0.986 0.878 0.932 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
90. F10G7.1 tag-151 9031 7.386 0.891 0.889 0.945 0.889 0.968 0.959 0.902 0.943 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
91. Y56A3A.19 Y56A3A.19 9680 7.386 0.895 0.871 0.890 0.871 0.970 0.981 0.932 0.976 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
92. Y14H12B.2 Y14H12B.2 6496 7.386 0.877 0.898 0.959 0.898 0.926 0.982 0.896 0.950
93. Y77E11A.6 rpc-11 2203 7.384 0.935 0.888 0.920 0.888 0.945 0.984 0.897 0.927 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
94. F32A5.7 lsm-4 3785 7.381 0.897 0.881 0.954 0.881 0.976 0.959 0.921 0.912 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
95. C49H3.10 xpo-3 9101 7.381 0.883 0.888 0.976 0.888 0.927 0.971 0.906 0.942 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
96. Y53C12B.3 nos-3 20231 7.379 0.874 0.892 0.955 0.892 0.962 0.931 0.912 0.961 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
97. K08F11.3 cif-1 10218 7.379 0.921 0.899 0.946 0.899 0.965 0.905 0.890 0.954 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
98. D2013.7 eif-3.F 21004 7.378 0.960 0.902 0.944 0.902 0.952 0.910 0.901 0.907 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
99. Y43F8C.8 mrps-28 4036 7.377 0.906 0.915 0.909 0.915 0.972 0.936 0.896 0.928 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
100. T06D8.5 cox-15 3892 7.377 0.863 0.895 0.916 0.895 0.972 0.940 0.921 0.975 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]

There are 1693 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA