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Results for F56D1.3

Gene ID Gene Name Reads Transcripts Annotation
F56D1.3 mrps-16 2309 F56D1.3 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]

Genes with expression patterns similar to F56D1.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56D1.3 mrps-16 2309 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
2. Y116A8C.42 snr-1 17062 7.687 0.982 0.959 0.972 0.959 0.982 0.931 0.950 0.952 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
3. C34E10.2 gop-2 5684 7.679 0.960 0.968 0.954 0.968 0.984 0.980 0.915 0.950 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
4. Y37D8A.11 cec-7 8801 7.667 0.941 0.962 0.976 0.962 0.983 0.952 0.948 0.943 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
5. F59A2.1 npp-9 34375 7.666 0.939 0.943 0.942 0.943 0.991 0.977 0.957 0.974 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
6. T28D9.10 snr-3 9995 7.658 0.978 0.958 0.949 0.958 0.982 0.964 0.932 0.937 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
7. D2023.5 mpst-1 10328 7.656 0.958 0.953 0.968 0.953 0.970 0.980 0.941 0.933 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
8. Y23H5B.6 Y23H5B.6 5886 7.654 0.950 0.966 0.955 0.966 0.981 0.944 0.933 0.959
9. T28D9.2 rsp-5 6460 7.646 0.942 0.959 0.958 0.959 0.956 0.973 0.940 0.959 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
10. Y14H12B.2 Y14H12B.2 6496 7.645 0.948 0.961 0.955 0.961 0.962 0.989 0.913 0.956
11. K08F4.2 gtbp-1 25222 7.639 0.976 0.961 0.970 0.961 0.976 0.939 0.923 0.933 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
12. C06A1.5 rpb-6 7515 7.638 0.965 0.954 0.964 0.954 0.964 0.968 0.945 0.924 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
13. B0035.12 sart-3 7188 7.635 0.952 0.961 0.964 0.961 0.962 0.935 0.956 0.944 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
14. Y54H5A.2 Y54H5A.2 2168 7.634 0.935 0.923 0.963 0.923 0.972 0.978 0.975 0.965
15. Y92H12BR.8 mrpl-15 6344 7.628 0.950 0.952 0.948 0.952 0.965 0.939 0.962 0.960 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
16. C14A4.14 mrps-22 7966 7.625 0.960 0.956 0.944 0.956 0.968 0.972 0.929 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
17. Y73B6BL.32 lsm-8 11002 7.619 0.960 0.968 0.957 0.968 0.986 0.911 0.914 0.955 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
18. F53A2.4 nud-1 7818 7.616 0.962 0.947 0.954 0.947 0.963 0.988 0.913 0.942 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
19. W06H3.3 ctps-1 8363 7.615 0.981 0.934 0.978 0.934 0.979 0.951 0.895 0.963 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
20. F58E10.3 ddx-17 15107 7.613 0.942 0.971 0.966 0.971 0.956 0.944 0.921 0.942 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
21. F21C3.4 rde-2 6286 7.613 0.956 0.951 0.959 0.951 0.957 0.964 0.955 0.920
22. Y53C12B.3 nos-3 20231 7.613 0.958 0.965 0.962 0.965 0.975 0.900 0.936 0.952 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
23. F22B5.9 fars-3 7209 7.611 0.976 0.966 0.942 0.966 0.957 0.951 0.912 0.941 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
24. K01G5.4 ran-1 32379 7.61 0.940 0.953 0.956 0.953 0.964 0.905 0.968 0.971 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
25. Y50D7A.9 taco-1 5949 7.6 0.944 0.944 0.931 0.944 0.979 0.934 0.954 0.970 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
26. Y40G12A.1 ubh-3 4142 7.598 0.966 0.961 0.954 0.961 0.952 0.962 0.929 0.913 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
27. F26F4.11 rpb-8 7601 7.593 0.957 0.935 0.971 0.935 0.982 0.970 0.868 0.975 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
28. T01E8.6 mrps-14 9328 7.593 0.962 0.953 0.953 0.953 0.949 0.946 0.908 0.969 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
29. Y71F9B.4 snr-7 13542 7.592 0.980 0.952 0.936 0.952 0.970 0.950 0.917 0.935 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
30. W08E3.1 snr-2 14849 7.592 0.959 0.956 0.963 0.956 0.924 0.961 0.922 0.951 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
31. T02G5.9 kars-1 9763 7.591 0.960 0.960 0.950 0.960 0.967 0.919 0.925 0.950 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
32. D2096.8 nap-1 59459 7.59 0.933 0.953 0.956 0.953 0.987 0.910 0.935 0.963 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
33. T23G11.3 gld-1 41748 7.587 0.960 0.956 0.947 0.956 0.947 0.983 0.919 0.919 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
34. T13H5.5 mrps-18B 3430 7.586 0.968 0.936 0.934 0.936 0.978 0.934 0.943 0.957 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
35. Y17G7A.1 hmg-12 29989 7.584 0.954 0.965 0.948 0.965 0.978 0.924 0.919 0.931 HMG [Source:RefSeq peptide;Acc:NP_496544]
36. C15H11.9 rrbs-1 9177 7.583 0.932 0.950 0.943 0.950 0.976 0.978 0.926 0.928 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
37. ZK652.1 snr-5 5993 7.58 0.972 0.961 0.946 0.961 0.942 0.952 0.919 0.927 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
38. H27M09.2 rpb-5 4744 7.58 0.955 0.934 0.950 0.934 0.966 0.968 0.918 0.955 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
39. R13A5.12 lpd-7 10476 7.58 0.952 0.954 0.893 0.954 0.976 0.976 0.932 0.943 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
40. Y54E5A.6 Y54E5A.6 770 7.577 0.959 0.937 0.959 0.937 0.988 0.948 0.911 0.938
41. F35D11.5 F35D11.5 14785 7.573 0.966 0.944 0.942 0.944 0.965 0.962 0.883 0.967
42. C01F6.8 icln-1 6586 7.573 0.935 0.948 0.962 0.948 0.979 0.946 0.930 0.925 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
43. K09H9.6 lpd-6 5459 7.57 0.949 0.937 0.973 0.937 0.974 0.983 0.925 0.892 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
44. C49H3.10 xpo-3 9101 7.569 0.927 0.972 0.959 0.972 0.944 0.962 0.941 0.892 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
45. C26D10.1 ran-3 11111 7.567 0.910 0.965 0.956 0.965 0.952 0.949 0.926 0.944 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
46. Y62E10A.11 mdt-9 5971 7.566 0.975 0.942 0.953 0.942 0.963 0.949 0.928 0.914 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
47. C05D11.10 mrps-17 4613 7.564 0.963 0.953 0.937 0.953 0.965 0.958 0.894 0.941 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
48. F53F4.12 F53F4.12 2683 7.564 0.968 0.922 0.947 0.922 0.957 0.978 0.928 0.942
49. Y113G7B.17 prmt-1 43709 7.563 0.925 0.960 0.961 0.960 0.986 0.876 0.944 0.951 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
50. K01G5.2 hpl-2 6781 7.563 0.933 0.948 0.962 0.948 0.968 0.927 0.902 0.975 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
51. T23H2.1 npp-12 12425 7.563 0.925 0.959 0.958 0.959 0.964 0.947 0.913 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
52. C27H5.3 fust-1 6978 7.563 0.964 0.954 0.961 0.954 0.955 0.930 0.930 0.915 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
53. C34E10.5 prmt-5 12277 7.561 0.955 0.972 0.970 0.972 0.955 0.922 0.876 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
54. ZK1128.6 ttll-4 6059 7.559 0.934 0.970 0.957 0.970 0.970 0.960 0.879 0.919 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
55. C48B6.3 C48B6.3 6610 7.559 0.957 0.898 0.954 0.898 0.984 0.970 0.964 0.934
56. F41G3.14 exos-8 2300 7.559 0.938 0.955 0.894 0.955 0.978 0.953 0.963 0.923 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
57. B0205.9 B0205.9 3651 7.558 0.965 0.929 0.932 0.929 0.947 0.961 0.959 0.936
58. F28H1.3 aars-2 13537 7.557 0.959 0.967 0.967 0.967 0.971 0.910 0.904 0.912 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
59. B0261.4 mrpl-47 8210 7.557 0.963 0.959 0.958 0.959 0.966 0.898 0.929 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
60. R07E5.14 rnp-4 11659 7.555 0.946 0.934 0.954 0.934 0.975 0.942 0.923 0.947 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
61. C26E6.4 rpb-2 7053 7.555 0.938 0.966 0.961 0.966 0.962 0.936 0.882 0.944 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
62. F55H2.6 clu-1 21404 7.554 0.930 0.956 0.950 0.956 0.981 0.935 0.923 0.923 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
63. Y48B6A.3 xrn-2 4881 7.554 0.951 0.925 0.934 0.925 0.970 0.987 0.926 0.936 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
64. B0303.15 mrpl-11 9889 7.554 0.964 0.930 0.956 0.930 0.967 0.958 0.911 0.938 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
65. K07A1.12 lin-53 15817 7.553 0.922 0.942 0.949 0.942 0.975 0.966 0.935 0.922 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
66. B0513.2 B0513.2 3641 7.553 0.912 0.949 0.964 0.949 0.951 0.972 0.917 0.939
67. T25G3.4 T25G3.4 9394 7.553 0.948 0.952 0.950 0.952 0.977 0.931 0.943 0.900 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
68. F59A2.3 cri-3 15077 7.551 0.973 0.928 0.900 0.928 0.974 0.961 0.921 0.966 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
69. F09F7.3 rpc-2 9751 7.55 0.935 0.929 0.973 0.929 0.964 0.954 0.947 0.919 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
70. C48B4.11 C48B4.11 4384 7.55 0.961 0.946 0.943 0.946 0.964 0.910 0.935 0.945
71. T16G1.11 eif-3.K 14014 7.548 0.972 0.954 0.971 0.954 0.952 0.880 0.908 0.957 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
72. ZK856.9 zhit-3 2552 7.548 0.951 0.947 0.931 0.947 0.936 0.983 0.965 0.888 Zinc finger, HIT-type [Source:RefSeq peptide;Acc:NP_505627]
73. T10G3.6 gut-2 3374 7.547 0.915 0.934 0.951 0.934 0.974 0.972 0.922 0.945
74. F23F1.1 nfyc-1 9983 7.545 0.940 0.949 0.960 0.949 0.967 0.927 0.908 0.945 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
75. R09B3.1 exo-3 4401 7.545 0.966 0.925 0.936 0.925 0.960 0.955 0.959 0.919 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
76. T06A10.4 lsy-13 7631 7.544 0.968 0.943 0.950 0.943 0.941 0.944 0.933 0.922
77. F33D4.8 mrps-24 2853 7.543 0.923 0.931 0.946 0.931 0.964 0.946 0.967 0.935 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
78. M01E11.5 cey-3 20931 7.54 0.949 0.937 0.934 0.937 0.953 0.969 0.938 0.923 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
79. C08F8.1 pfd-1 10199 7.538 0.959 0.949 0.939 0.949 0.976 0.926 0.934 0.906 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
80. F56D12.5 vig-1 42594 7.538 0.970 0.950 0.950 0.950 0.959 0.892 0.936 0.931 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
81. F01F1.8 cct-6 29460 7.537 0.978 0.962 0.959 0.962 0.950 0.950 0.898 0.878 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
82. C08B11.5 sap-49 10553 7.537 0.965 0.943 0.968 0.943 0.950 0.928 0.904 0.936 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
83. B0205.11 mrpl-9 9162 7.536 0.954 0.961 0.936 0.961 0.976 0.893 0.927 0.928 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
84. Y40B1B.8 Y40B1B.8 4877 7.536 0.960 0.929 0.961 0.929 0.972 0.939 0.912 0.934
85. Y43F8C.8 mrps-28 4036 7.535 0.957 0.934 0.932 0.934 0.960 0.917 0.941 0.960 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
86. C27H6.3 tofu-1 2992 7.534 0.918 0.937 0.926 0.937 0.978 0.962 0.918 0.958 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
87. B0511.8 mrps-30 5050 7.534 0.917 0.963 0.960 0.963 0.956 0.908 0.935 0.932 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
88. F09G2.9 attf-2 14771 7.534 0.946 0.956 0.960 0.956 0.972 0.951 0.899 0.894 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
89. F43G9.5 cfim-1 9169 7.532 0.939 0.936 0.947 0.936 0.968 0.957 0.908 0.941 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
90. Y87G2A.6 cyn-15 2566 7.531 0.896 0.956 0.942 0.956 0.973 0.950 0.910 0.948 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
91. C25A1.10 dao-5 18351 7.531 0.895 0.936 0.955 0.936 0.975 0.939 0.955 0.940 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
92. PAR2.1 mtss-1 4055 7.531 0.966 0.922 0.961 0.922 0.961 0.946 0.930 0.923 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
93. Y37D8A.9 mrg-1 14369 7.529 0.913 0.937 0.940 0.937 0.986 0.952 0.909 0.955 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
94. F10G7.1 tag-151 9031 7.528 0.914 0.966 0.962 0.966 0.981 0.937 0.875 0.927 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
95. F54B3.3 atad-3 9583 7.528 0.958 0.912 0.916 0.912 0.980 0.973 0.926 0.951 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
96. R53.2 dtmk-1 6821 7.528 0.892 0.951 0.960 0.951 0.972 0.966 0.922 0.914 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
97. T24H7.1 phb-2 28775 7.527 0.972 0.953 0.895 0.953 0.965 0.946 0.921 0.922 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
98. W06E11.4 sbds-1 6701 7.526 0.950 0.937 0.948 0.937 0.965 0.953 0.918 0.918 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
99. F13G3.11 mrpl-13 6024 7.526 0.926 0.950 0.879 0.950 0.982 0.984 0.944 0.911 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
100. C01A2.3 oxa-1 2783 7.524 0.952 0.931 0.920 0.931 0.946 0.979 0.940 0.925 OXA mitochondrial inner membrane insertase homolog [Source:RefSeq peptide;Acc:NP_493356]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA