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Results for W08E3.1

Gene ID Gene Name Reads Transcripts Annotation
W08E3.1 snr-2 14849 W08E3.1 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]

Genes with expression patterns similar to W08E3.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W08E3.1 snr-2 14849 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
2. D2023.5 mpst-1 10328 7.802 0.962 0.968 0.972 0.968 0.977 0.985 0.986 0.984 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
3. Y116A8C.42 snr-1 17062 7.8 0.971 0.985 0.984 0.985 0.945 0.981 0.987 0.962 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. R07E5.14 rnp-4 11659 7.792 0.982 0.961 0.987 0.961 0.967 0.973 0.987 0.974 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
5. Y71F9B.4 snr-7 13542 7.767 0.959 0.968 0.979 0.968 0.972 0.968 0.967 0.986 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
6. F43G9.5 cfim-1 9169 7.761 0.973 0.949 0.971 0.949 0.978 0.983 0.976 0.982 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
7. W06E11.4 sbds-1 6701 7.76 0.955 0.973 0.977 0.973 0.977 0.980 0.953 0.972 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
8. W06H3.3 ctps-1 8363 7.757 0.960 0.969 0.969 0.969 0.956 0.978 0.975 0.981 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
9. C26D10.1 ran-3 11111 7.755 0.956 0.980 0.972 0.980 0.945 0.982 0.962 0.978 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
10. F53A2.4 nud-1 7818 7.749 0.976 0.959 0.979 0.959 0.955 0.970 0.992 0.959 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
11. T28D9.10 snr-3 9995 7.749 0.975 0.968 0.970 0.968 0.957 0.981 0.991 0.939 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
12. C34E10.2 gop-2 5684 7.746 0.972 0.968 0.978 0.968 0.952 0.959 0.981 0.968 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
13. Y40G12A.1 ubh-3 4142 7.746 0.968 0.961 0.975 0.961 0.976 0.978 0.953 0.974 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
14. K08F4.2 gtbp-1 25222 7.743 0.974 0.974 0.986 0.974 0.942 0.952 0.984 0.957 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
15. Y14H12B.2 Y14H12B.2 6496 7.743 0.954 0.975 0.981 0.975 0.916 0.981 0.978 0.983
16. Y37D8A.9 mrg-1 14369 7.739 0.949 0.968 0.956 0.968 0.964 0.984 0.972 0.978 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
17. C06A1.5 rpb-6 7515 7.738 0.966 0.966 0.971 0.966 0.960 0.976 0.959 0.974 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
18. Y73B6BL.32 lsm-8 11002 7.735 0.970 0.975 0.980 0.975 0.934 0.970 0.972 0.959 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
19. T28D9.2 rsp-5 6460 7.734 0.964 0.988 0.975 0.988 0.942 0.978 0.948 0.951 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
20. Y62E10A.12 lsm-3 4322 7.729 0.981 0.952 0.970 0.952 0.939 0.973 0.983 0.979 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
21. H20J04.8 mog-2 3084 7.728 0.971 0.973 0.953 0.973 0.930 0.972 0.974 0.982 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
22. F26F4.11 rpb-8 7601 7.727 0.954 0.954 0.968 0.954 0.958 0.985 0.965 0.989 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
23. T23G11.3 gld-1 41748 7.726 0.959 0.970 0.975 0.970 0.945 0.971 0.974 0.962 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
24. F59A2.1 npp-9 34375 7.726 0.965 0.968 0.971 0.968 0.922 0.984 0.981 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
25. Y54E5A.6 Y54E5A.6 770 7.718 0.941 0.967 0.985 0.967 0.927 0.983 0.955 0.993
26. C34D4.12 cyn-12 7363 7.717 0.958 0.962 0.961 0.962 0.950 0.975 0.974 0.975 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
27. R09B3.5 mag-1 7496 7.716 0.954 0.971 0.987 0.971 0.960 0.961 0.946 0.966 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
28. K01G5.2 hpl-2 6781 7.709 0.943 0.979 0.977 0.979 0.948 0.975 0.932 0.976 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
29. T21B10.7 cct-2 13999 7.708 0.981 0.974 0.981 0.974 0.947 0.955 0.967 0.929 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
30. Y41D4B.19 npp-8 12992 7.708 0.955 0.983 0.978 0.983 0.967 0.964 0.968 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
31. C01F6.8 icln-1 6586 7.705 0.965 0.962 0.965 0.962 0.939 0.984 0.979 0.949 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
32. T01E8.6 mrps-14 9328 7.703 0.961 0.976 0.964 0.976 0.937 0.972 0.955 0.962 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
33. M01E11.5 cey-3 20931 7.702 0.968 0.950 0.981 0.950 0.956 0.945 0.980 0.972 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
34. F56B3.8 mrpl-2 3195 7.701 0.967 0.965 0.953 0.965 0.950 0.965 0.956 0.980 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
35. Y53C12B.3 nos-3 20231 7.701 0.964 0.979 0.969 0.979 0.935 0.937 0.962 0.976 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
36. Y39B6A.35 tgt-2 2364 7.7 0.980 0.967 0.929 0.967 0.967 0.928 0.988 0.974 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
37. Y62E10A.11 mdt-9 5971 7.698 0.974 0.961 0.976 0.961 0.948 0.983 0.956 0.939 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
38. T10G3.6 gut-2 3374 7.696 0.976 0.944 0.963 0.944 0.962 0.986 0.947 0.974
39. Y71G12B.9 lin-65 7476 7.696 0.944 0.981 0.980 0.981 0.940 0.974 0.945 0.951 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
40. T21B10.1 mrpl-50 14595 7.691 0.956 0.982 0.981 0.982 0.956 0.964 0.963 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
41. C48B4.7 C48B4.7 4006 7.689 0.971 0.935 0.955 0.935 0.987 0.942 0.980 0.984
42. Y47D3A.26 smc-3 6256 7.687 0.920 0.976 0.970 0.976 0.954 0.953 0.977 0.961 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
43. C18E9.3 szy-20 6819 7.683 0.966 0.966 0.973 0.966 0.965 0.945 0.974 0.928 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
44. F10G7.3 unc-85 5206 7.682 0.961 0.943 0.953 0.943 0.986 0.986 0.950 0.960 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
45. F56F3.1 ifet-1 25772 7.681 0.969 0.964 0.981 0.964 0.926 0.958 0.949 0.970 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
46. K07A1.12 lin-53 15817 7.677 0.958 0.955 0.963 0.955 0.935 0.973 0.974 0.964 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
47. C16C10.4 C16C10.4 3439 7.677 0.959 0.954 0.954 0.954 0.970 0.959 0.945 0.982 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
48. F52F12.4 lsl-1 4055 7.676 0.925 0.976 0.955 0.976 0.923 0.974 0.981 0.966 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
49. Y56A3A.19 Y56A3A.19 9680 7.673 0.943 0.942 0.938 0.942 0.959 0.982 0.985 0.982 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
50. Y37E3.3 rpb-10 4051 7.672 0.962 0.941 0.945 0.941 0.948 0.989 0.974 0.972 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
51. B0414.5 cpb-3 11584 7.672 0.983 0.972 0.966 0.972 0.969 0.931 0.988 0.891 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
52. C04G2.6 dis-3 5048 7.671 0.938 0.977 0.952 0.977 0.992 0.959 0.925 0.951 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
53. ZK863.6 dpy-30 16177 7.669 0.971 0.976 0.973 0.976 0.944 0.919 0.973 0.937 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
54. Y116A8C.34 cyn-13 2972 7.665 0.983 0.954 0.960 0.954 0.958 0.971 0.958 0.927 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
55. Y23H5B.6 Y23H5B.6 5886 7.664 0.961 0.969 0.968 0.969 0.897 0.971 0.958 0.971
56. C49H3.10 xpo-3 9101 7.662 0.943 0.973 0.971 0.973 0.934 0.978 0.962 0.928 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
57. H27M09.2 rpb-5 4744 7.66 0.973 0.941 0.975 0.941 0.913 0.972 0.976 0.969 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
58. Y73B6BL.33 hrpf-2 4443 7.66 0.952 0.959 0.982 0.959 0.935 0.964 0.971 0.938 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
59. F01F1.8 cct-6 29460 7.659 0.977 0.974 0.984 0.974 0.907 0.951 0.959 0.933 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
60. T07D4.4 ddx-19 7234 7.658 0.965 0.956 0.981 0.956 0.968 0.973 0.956 0.903 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
61. T12E12.2 cec-6 4758 7.655 0.952 0.972 0.980 0.972 0.937 0.968 0.968 0.906 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
62. B0035.12 sart-3 7188 7.654 0.969 0.970 0.969 0.970 0.938 0.960 0.921 0.957 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
63. ZK1128.6 ttll-4 6059 7.654 0.956 0.981 0.957 0.981 0.949 0.953 0.914 0.963 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
64. F52B5.3 F52B5.3 2077 7.653 0.963 0.982 0.965 0.982 0.908 0.970 0.977 0.906
65. W01A8.5 tofu-5 5678 7.653 0.930 0.955 0.951 0.955 0.969 0.948 0.987 0.958 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
66. C26E6.7 eri-9 8069 7.65 0.951 0.959 0.935 0.959 0.976 0.973 0.974 0.923 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
67. B0205.9 B0205.9 3651 7.65 0.955 0.968 0.945 0.968 0.959 0.934 0.959 0.962
68. F21C3.4 rde-2 6286 7.648 0.934 0.957 0.975 0.957 0.939 0.971 0.941 0.974
69. C25A1.4 C25A1.4 15507 7.647 0.967 0.978 0.957 0.978 0.951 0.961 0.973 0.882
70. F59E12.11 sam-4 8179 7.646 0.980 0.942 0.983 0.942 0.951 0.957 0.960 0.931
71. Y113G7B.5 fog-2 2753 7.646 0.943 0.967 0.950 0.967 0.953 0.980 0.956 0.930 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
72. F53F10.5 npp-11 3378 7.645 0.970 0.948 0.967 0.948 0.912 0.981 0.957 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
73. Y49E10.15 snr-6 8505 7.645 0.971 0.937 0.873 0.937 0.978 0.983 0.990 0.976 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
74. K11H3.6 mrpl-36 7328 7.643 0.955 0.962 0.959 0.962 0.924 0.972 0.975 0.934 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
75. K01G5.4 ran-1 32379 7.643 0.979 0.973 0.970 0.973 0.881 0.954 0.949 0.964 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
76. Y37D8A.11 cec-7 8801 7.642 0.965 0.970 0.983 0.970 0.922 0.961 0.966 0.905 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
77. C15H11.6 nxf-2 1545 7.642 0.961 0.971 0.941 0.971 0.933 0.956 0.970 0.939 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
78. Y55F3AM.12 dcap-1 8679 7.642 0.973 0.967 0.967 0.967 0.966 0.962 0.955 0.885 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
79. Y50D7A.9 taco-1 5949 7.642 0.961 0.955 0.931 0.955 0.927 0.971 0.964 0.978 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
80. C07H6.5 cgh-1 60576 7.642 0.946 0.946 0.956 0.946 0.957 0.946 0.975 0.970 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
81. T06D8.5 cox-15 3892 7.641 0.963 0.935 0.949 0.935 0.956 0.954 0.976 0.973 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
82. F32A5.7 lsm-4 3785 7.641 0.976 0.962 0.980 0.962 0.915 0.962 0.953 0.931 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
83. K08D10.4 rnp-2 2338 7.639 0.967 0.939 0.954 0.939 0.951 0.971 0.977 0.941 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500504]
84. F09G2.9 attf-2 14771 7.639 0.979 0.968 0.971 0.968 0.922 0.942 0.945 0.944 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
85. C37A2.4 cye-1 4158 7.638 0.921 0.943 0.973 0.943 0.940 0.978 0.984 0.956 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
86. C46A5.9 hcf-1 6295 7.638 0.971 0.964 0.976 0.964 0.965 0.956 0.940 0.902 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
87. Y73B6BL.3 exos-2 2624 7.637 0.976 0.956 0.953 0.956 0.944 0.961 0.980 0.911 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
88. F10G7.1 tag-151 9031 7.633 0.902 0.959 0.975 0.959 0.949 0.974 0.965 0.950 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
89. R06F6.1 cdl-1 14167 7.633 0.891 0.955 0.938 0.955 0.968 0.976 0.977 0.973 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
90. C06A8.4 skr-17 2589 7.633 0.970 0.957 0.954 0.957 0.965 0.950 0.947 0.933 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
91. ZC410.2 mppb-1 3991 7.633 0.953 0.959 0.931 0.959 0.961 0.938 0.979 0.953 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
92. R09B3.1 exo-3 4401 7.632 0.967 0.947 0.966 0.947 0.940 0.939 0.965 0.961 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
93. C08F8.1 pfd-1 10199 7.631 0.971 0.950 0.969 0.950 0.942 0.963 0.949 0.937 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
94. F28H1.3 aars-2 13537 7.63 0.971 0.974 0.978 0.974 0.906 0.951 0.952 0.924 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
95. H43I07.2 rpac-40 3342 7.63 0.954 0.950 0.949 0.950 0.939 0.960 0.963 0.965 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
96. F23F1.1 nfyc-1 9983 7.629 0.968 0.967 0.967 0.967 0.953 0.972 0.913 0.922 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
97. F41G3.14 exos-8 2300 7.629 0.944 0.954 0.905 0.954 0.945 0.986 0.965 0.976 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
98. C41C4.6 ulp-4 13338 7.629 0.936 0.968 0.976 0.968 0.946 0.952 0.957 0.926 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
99. T02G5.9 kars-1 9763 7.629 0.970 0.964 0.958 0.964 0.918 0.968 0.957 0.930 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
100. C25A1.10 dao-5 18351 7.626 0.888 0.961 0.954 0.961 0.928 0.969 0.981 0.984 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA