C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C15H11.6

Gene ID Gene Name Reads Transcripts Annotation
C15H11.6 nxf-2 1545 C15H11.6.1, C15H11.6.2 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]

Genes with expression patterns similar to C15H11.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C15H11.6 nxf-2 1545 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nuclear RNA export factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS8]
2. T28D9.2 rsp-5 6460 7.646 0.939 0.971 0.956 0.971 0.940 0.974 0.957 0.938 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
3. Y37D8A.11 cec-7 8801 7.643 0.933 0.975 0.955 0.975 0.929 0.942 0.984 0.950 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
4. W08E3.1 snr-2 14849 7.642 0.961 0.971 0.941 0.971 0.933 0.956 0.970 0.939 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
5. C34E10.2 gop-2 5684 7.632 0.948 0.976 0.950 0.976 0.946 0.942 0.961 0.933 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
6. D2023.5 mpst-1 10328 7.628 0.947 0.957 0.922 0.957 0.948 0.956 0.981 0.960 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
7. Y116A8C.42 snr-1 17062 7.62 0.942 0.977 0.937 0.977 0.940 0.923 0.976 0.948 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
8. K08F4.2 gtbp-1 25222 7.617 0.947 0.976 0.944 0.976 0.953 0.911 0.982 0.928 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
9. F53F10.5 npp-11 3378 7.608 0.947 0.959 0.938 0.959 0.953 0.972 0.919 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
10. B0414.5 cpb-3 11584 7.604 0.943 0.961 0.942 0.961 0.904 0.976 0.963 0.954 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
11. C25A1.4 C25A1.4 15507 7.603 0.939 0.979 0.934 0.979 0.935 0.974 0.943 0.920
12. Y113G7B.5 fog-2 2753 7.603 0.946 0.943 0.933 0.943 0.973 0.959 0.946 0.960 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
13. Y37D8A.9 mrg-1 14369 7.6 0.916 0.970 0.944 0.970 0.936 0.938 0.962 0.964 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
14. T28D9.10 snr-3 9995 7.598 0.964 0.961 0.886 0.961 0.966 0.955 0.965 0.940 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
15. F32A5.7 lsm-4 3785 7.597 0.951 0.970 0.945 0.970 0.944 0.941 0.943 0.933 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
16. C34D4.12 cyn-12 7363 7.589 0.922 0.958 0.935 0.958 0.942 0.958 0.981 0.935 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
17. R07E5.14 rnp-4 11659 7.587 0.963 0.953 0.931 0.953 0.943 0.919 0.969 0.956 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
18. C06A1.5 rpb-6 7515 7.583 0.941 0.978 0.915 0.978 0.964 0.937 0.973 0.897 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
19. C46A5.9 hcf-1 6295 7.583 0.932 0.952 0.935 0.952 0.962 0.967 0.920 0.963 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
20. W01G7.3 rpb-11 7826 7.582 0.951 0.960 0.957 0.960 0.946 0.926 0.941 0.941 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
21. Y41D4B.19 npp-8 12992 7.571 0.913 0.966 0.942 0.966 0.917 0.959 0.966 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
22. C26D10.1 ran-3 11111 7.571 0.916 0.981 0.914 0.981 0.942 0.942 0.950 0.945 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
23. F43G9.5 cfim-1 9169 7.571 0.940 0.951 0.943 0.951 0.920 0.947 0.964 0.955 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
24. F23F1.1 nfyc-1 9983 7.569 0.946 0.965 0.948 0.965 0.939 0.940 0.938 0.928 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
25. F59A2.1 npp-9 34375 7.568 0.930 0.958 0.920 0.958 0.913 0.967 0.974 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
26. W06H3.3 ctps-1 8363 7.568 0.950 0.965 0.923 0.965 0.933 0.943 0.947 0.942 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
27. F58E10.3 ddx-17 15107 7.568 0.939 0.978 0.945 0.978 0.939 0.917 0.932 0.940 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
28. C23G10.8 C23G10.8 4642 7.568 0.922 0.965 0.951 0.965 0.885 0.960 0.955 0.965
29. F32H2.1 snpc-4 7581 7.564 0.949 0.971 0.937 0.971 0.934 0.926 0.943 0.933 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
30. Y71G12B.9 lin-65 7476 7.561 0.908 0.974 0.935 0.974 0.918 0.950 0.944 0.958 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
31. Y39G10AR.7 ekl-7 7072 7.559 0.921 0.940 0.928 0.940 0.945 0.967 0.970 0.948
32. T25G3.3 T25G3.3 7285 7.559 0.932 0.965 0.919 0.965 0.942 0.945 0.945 0.946
33. F26F4.11 rpb-8 7601 7.559 0.957 0.955 0.940 0.955 0.935 0.951 0.926 0.940 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
34. F53A2.4 nud-1 7818 7.558 0.949 0.944 0.937 0.944 0.921 0.958 0.970 0.935 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
35. C48B4.11 C48B4.11 4384 7.558 0.928 0.971 0.940 0.971 0.928 0.908 0.961 0.951
36. Y73B6BL.33 hrpf-2 4443 7.557 0.907 0.973 0.936 0.973 0.949 0.967 0.940 0.912 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
37. T23G11.3 gld-1 41748 7.555 0.923 0.963 0.908 0.963 0.856 0.977 0.976 0.989 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
38. T12E12.2 cec-6 4758 7.554 0.910 0.967 0.945 0.967 0.973 0.931 0.966 0.895 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
39. R09B3.5 mag-1 7496 7.554 0.955 0.967 0.948 0.967 0.940 0.915 0.931 0.931 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
40. T23H2.1 npp-12 12425 7.553 0.947 0.966 0.948 0.966 0.930 0.940 0.906 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
41. Y14H12B.2 Y14H12B.2 6496 7.549 0.924 0.973 0.949 0.973 0.875 0.963 0.966 0.926
42. Y54E5A.4 npp-4 6288 7.549 0.945 0.973 0.956 0.973 0.917 0.929 0.916 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
43. F33H2.5 pole-1 3734 7.547 0.913 0.947 0.932 0.947 0.965 0.965 0.917 0.961 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
44. H43I07.2 rpac-40 3342 7.547 0.918 0.931 0.906 0.931 0.946 0.978 0.974 0.963 RNA Polymerase I/III (A/C) shared subunit [Source:RefSeq peptide;Acc:NP_504166]
45. Y47D3A.26 smc-3 6256 7.545 0.880 0.977 0.949 0.977 0.902 0.967 0.974 0.919 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
46. K01G5.4 ran-1 32379 7.545 0.952 0.965 0.933 0.965 0.945 0.904 0.961 0.920 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
47. Y37E3.3 rpb-10 4051 7.543 0.965 0.942 0.915 0.942 0.972 0.931 0.948 0.928 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
48. C01F6.8 icln-1 6586 7.54 0.943 0.947 0.938 0.947 0.921 0.945 0.975 0.924 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
49. C25A1.3 tag-72 1861 7.54 0.957 0.938 0.845 0.938 0.932 0.983 0.973 0.974 mRNA cap guanine-N7 methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS1]
50. T01E8.6 mrps-14 9328 7.54 0.961 0.971 0.895 0.971 0.957 0.966 0.932 0.887 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
51. C26E6.4 rpb-2 7053 7.539 0.931 0.975 0.904 0.975 0.930 0.926 0.932 0.966 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
52. F26B1.3 ima-2 18826 7.538 0.900 0.957 0.942 0.957 0.902 0.930 0.984 0.966 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
53. F52F12.4 lsl-1 4055 7.537 0.873 0.981 0.915 0.981 0.887 0.968 0.952 0.980 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
54. K01G5.2 hpl-2 6781 7.537 0.916 0.953 0.934 0.953 0.945 0.949 0.948 0.939 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
55. K12C11.2 smo-1 12784 7.533 0.949 0.955 0.952 0.955 0.932 0.893 0.948 0.949 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
56. Y39E4B.2 snpc-1.2 5800 7.53 0.914 0.963 0.949 0.963 0.857 0.965 0.975 0.944 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
57. C18E9.3 szy-20 6819 7.528 0.932 0.953 0.950 0.953 0.928 0.944 0.940 0.928 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
58. Y40G12A.1 ubh-3 4142 7.527 0.959 0.973 0.896 0.973 0.926 0.946 0.955 0.899 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
59. B0511.7 B0511.7 1070 7.527 0.935 0.924 0.958 0.924 0.954 0.950 0.947 0.935
60. K07A1.12 lin-53 15817 7.524 0.929 0.959 0.950 0.959 0.904 0.929 0.984 0.910 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
61. Y69A2AR.30 mdf-2 6403 7.524 0.894 0.915 0.925 0.915 0.969 0.960 0.956 0.990 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
62. R06F6.1 cdl-1 14167 7.524 0.850 0.957 0.934 0.957 0.934 0.970 0.977 0.945 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
63. M01E11.5 cey-3 20931 7.524 0.939 0.940 0.936 0.940 0.867 0.959 0.974 0.969 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
64. ZK381.1 him-3 4913 7.524 0.939 0.963 0.937 0.963 0.889 0.972 0.910 0.951 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
65. K04C2.3 K04C2.3 23540 7.523 0.885 0.949 0.921 0.949 0.927 0.959 0.970 0.963
66. Y53C12B.3 nos-3 20231 7.523 0.934 0.968 0.922 0.968 0.915 0.904 0.958 0.954 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
67. C14A4.14 mrps-22 7966 7.518 0.918 0.976 0.856 0.976 0.953 0.961 0.943 0.935 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
68. Y55F3AM.12 dcap-1 8679 7.518 0.941 0.963 0.934 0.963 0.929 0.926 0.964 0.898 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
69. F18A1.8 pid-1 3751 7.517 0.945 0.957 0.891 0.957 0.918 0.954 0.924 0.971 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
70. T21B10.1 mrpl-50 14595 7.516 0.941 0.976 0.907 0.976 0.927 0.926 0.958 0.905 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
71. C48B4.7 C48B4.7 4006 7.515 0.941 0.925 0.913 0.925 0.944 0.940 0.965 0.962
72. Y39B6A.35 tgt-2 2364 7.512 0.957 0.950 0.845 0.950 0.938 0.951 0.973 0.948 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
73. C26B2.6 elpc-4 3600 7.512 0.937 0.943 0.910 0.943 0.912 0.964 0.957 0.946 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
74. Y18D10A.16 Y18D10A.16 2881 7.511 0.938 0.913 0.930 0.913 0.950 0.973 0.927 0.967
75. C27H6.2 ruvb-1 6291 7.51 0.937 0.963 0.932 0.963 0.956 0.910 0.969 0.880 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
76. B0240.4 npp-22 5510 7.51 0.865 0.941 0.926 0.941 0.961 0.963 0.954 0.959 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
77. ZK1128.6 ttll-4 6059 7.507 0.927 0.977 0.951 0.977 0.910 0.927 0.906 0.932 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
78. C06A8.4 skr-17 2589 7.507 0.942 0.950 0.920 0.950 0.921 0.971 0.887 0.966 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
79. Y56A3A.29 ung-1 1900 7.506 0.892 0.941 0.918 0.941 0.976 0.969 0.911 0.958 Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
80. F10E9.7 F10E9.7 1842 7.504 0.954 0.924 0.938 0.924 0.922 0.952 0.932 0.958
81. C26E6.7 eri-9 8069 7.504 0.915 0.950 0.893 0.950 0.928 0.969 0.964 0.935 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
82. C16C10.4 C16C10.4 3439 7.503 0.930 0.953 0.885 0.953 0.963 0.963 0.923 0.933 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
83. Y73B6BL.32 lsm-8 11002 7.503 0.956 0.972 0.920 0.972 0.929 0.903 0.939 0.912 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
84. C48D1.2 ced-3 4123 7.502 0.938 0.932 0.939 0.932 0.934 0.979 0.953 0.895 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
85. F14D2.13 bath-28 1965 7.501 0.900 0.939 0.915 0.939 0.915 0.964 0.967 0.962 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_871999]
86. F28H1.3 aars-2 13537 7.5 0.936 0.974 0.933 0.974 0.953 0.895 0.929 0.906 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
87. Y66D12A.8 Y66D12A.8 3949 7.499 0.900 0.953 0.926 0.953 0.894 0.964 0.948 0.961
88. Y71F9B.4 snr-7 13542 7.499 0.951 0.956 0.908 0.956 0.940 0.927 0.937 0.924 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
89. F31E3.3 rfc-4 3828 7.498 0.940 0.951 0.910 0.951 0.954 0.948 0.927 0.917 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
90. Y17G7A.1 hmg-12 29989 7.497 0.949 0.969 0.931 0.969 0.906 0.930 0.921 0.922 HMG [Source:RefSeq peptide;Acc:NP_496544]
91. E02H1.3 tag-124 2189 7.497 0.911 0.949 0.952 0.949 0.927 0.903 0.958 0.948 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
92. W01A8.5 tofu-5 5678 7.497 0.912 0.955 0.891 0.955 0.923 0.945 0.959 0.957 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
93. D2007.4 mrpl-18 2880 7.496 0.926 0.954 0.909 0.954 0.942 0.963 0.956 0.892 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
94. F28B3.8 imb-1 7515 7.496 0.900 0.973 0.904 0.973 0.957 0.931 0.937 0.921 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
95. T02G5.9 kars-1 9763 7.496 0.926 0.965 0.882 0.965 0.938 0.942 0.961 0.917 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
96. Y23H5B.6 Y23H5B.6 5886 7.495 0.911 0.973 0.949 0.973 0.902 0.936 0.937 0.914
97. F14B4.3 rpoa-2 7549 7.494 0.879 0.974 0.949 0.974 0.905 0.950 0.962 0.901 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
98. F09G2.9 attf-2 14771 7.493 0.940 0.976 0.951 0.976 0.892 0.931 0.958 0.869 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
99. R53.2 dtmk-1 6821 7.493 0.919 0.973 0.912 0.973 0.968 0.972 0.847 0.929 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
100. T22C1.3 T22C1.3 2305 7.492 0.937 0.946 0.935 0.946 0.926 0.953 0.918 0.931

There are 1579 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA