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Results for C15H11.9

Gene ID Gene Name Reads Transcripts Annotation
C15H11.9 rrbs-1 9177 C15H11.9 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]

Genes with expression patterns similar to C15H11.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C15H11.9 rrbs-1 9177 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
2. R13A5.12 lpd-7 10476 7.814 0.968 0.964 0.964 0.964 0.979 0.993 0.990 0.992 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
3. D2096.8 nap-1 59459 7.796 0.969 0.981 0.987 0.981 0.985 0.950 0.973 0.970 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
4. Y113G7B.17 prmt-1 43709 7.79 0.959 0.984 0.976 0.984 0.984 0.925 0.993 0.985 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
5. Y48B6A.3 xrn-2 4881 7.786 0.958 0.967 0.978 0.967 0.981 0.981 0.974 0.980 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
6. C25A1.10 dao-5 18351 7.785 0.947 0.975 0.974 0.975 0.993 0.969 0.972 0.980 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
7. T03D8.2 mrps-12 8253 7.766 0.945 0.976 0.976 0.976 0.986 0.959 0.980 0.968 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
8. F10G7.1 tag-151 9031 7.763 0.962 0.966 0.987 0.966 0.994 0.972 0.973 0.943 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
9. T01C3.7 fib-1 23572 7.762 0.971 0.970 0.972 0.970 0.981 0.945 0.979 0.974 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
10. C16A3.3 let-716 8448 7.762 0.923 0.976 0.973 0.976 0.980 0.963 0.989 0.982
11. C14A4.14 mrps-22 7966 7.745 0.952 0.958 0.960 0.958 0.953 0.995 0.986 0.983 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
12. K09H9.6 lpd-6 5459 7.741 0.971 0.969 0.942 0.969 0.990 0.987 0.987 0.926 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
13. T21G5.3 glh-1 16470 7.739 0.970 0.981 0.980 0.981 0.958 0.936 0.962 0.971 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
14. T28D9.10 snr-3 9995 7.727 0.933 0.943 0.986 0.943 0.981 0.989 0.970 0.982 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
15. T23F6.4 rbd-1 5825 7.726 0.926 0.972 0.954 0.972 0.960 0.980 0.977 0.985 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
16. K08F4.2 gtbp-1 25222 7.721 0.948 0.959 0.955 0.959 0.976 0.969 0.973 0.982 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
17. F55H2.6 clu-1 21404 7.718 0.957 0.966 0.966 0.966 0.962 0.970 0.972 0.959 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
18. ZK945.3 puf-12 6266 7.71 0.874 0.975 0.966 0.975 0.970 0.973 0.990 0.987 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
19. T19A6.2 ngp-1 5884 7.709 0.964 0.968 0.956 0.968 0.976 0.931 0.974 0.972 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
20. Y53C12B.3 nos-3 20231 7.708 0.961 0.947 0.946 0.947 0.976 0.956 0.988 0.987 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
21. F13G3.11 mrpl-13 6024 7.705 0.922 0.977 0.960 0.977 0.977 0.977 0.977 0.938 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
22. C06A1.5 rpb-6 7515 7.704 0.941 0.953 0.950 0.953 0.981 0.973 0.981 0.972 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
23. C01G8.6 hpo-32 7439 7.704 0.938 0.946 0.967 0.946 0.979 0.982 0.984 0.962
24. F56D12.5 vig-1 42594 7.703 0.945 0.972 0.979 0.972 0.947 0.950 0.963 0.975 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
25. C03D6.8 rpl-24.2 5932 7.689 0.973 0.955 0.925 0.955 0.966 0.971 0.975 0.969 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
26. Y50D7A.9 taco-1 5949 7.687 0.946 0.943 0.967 0.943 0.961 0.978 0.985 0.964 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
27. F59A2.3 cri-3 15077 7.686 0.944 0.972 0.962 0.972 0.937 0.981 0.954 0.964 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
28. Y54H5A.2 Y54H5A.2 2168 7.686 0.972 0.915 0.978 0.915 0.982 0.988 0.970 0.966
29. F09F7.3 rpc-2 9751 7.685 0.961 0.957 0.950 0.957 0.984 0.982 0.978 0.916 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
30. Y116A8C.42 snr-1 17062 7.683 0.957 0.943 0.950 0.943 0.987 0.967 0.985 0.951 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
31. W07E6.1 nol-1 7892 7.678 0.897 0.963 0.957 0.963 0.975 0.969 0.985 0.969 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
32. W01B11.3 nol-5 23544 7.677 0.948 0.974 0.985 0.974 0.964 0.865 0.993 0.974 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
33. D2023.5 mpst-1 10328 7.675 0.932 0.948 0.970 0.948 0.980 0.981 0.969 0.947 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
34. T24H7.1 phb-2 28775 7.668 0.965 0.955 0.968 0.955 0.945 0.966 0.973 0.941 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
35. Y37D8A.11 cec-7 8801 7.659 0.956 0.939 0.946 0.939 0.988 0.973 0.989 0.929 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
36. W06H3.3 ctps-1 8363 7.657 0.917 0.951 0.946 0.951 0.971 0.985 0.965 0.971 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
37. B0513.2 B0513.2 3641 7.654 0.908 0.941 0.955 0.941 0.974 0.984 0.986 0.965
38. Y23H5B.6 Y23H5B.6 5886 7.654 0.938 0.960 0.915 0.960 0.971 0.965 0.966 0.979
39. T23G11.3 gld-1 41748 7.654 0.940 0.941 0.957 0.941 0.975 0.985 0.961 0.954 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
40. C27H6.2 ruvb-1 6291 7.653 0.944 0.968 0.923 0.968 0.970 0.952 0.975 0.953 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
41. C26E6.4 rpb-2 7053 7.651 0.940 0.958 0.952 0.958 0.949 0.965 0.962 0.967 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
42. T28D9.2 rsp-5 6460 7.65 0.902 0.955 0.923 0.955 0.985 0.988 0.978 0.964 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
43. C27H6.3 tofu-1 2992 7.649 0.930 0.932 0.974 0.932 0.988 0.981 0.988 0.924 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
44. F20A1.9 tofu-2 3341 7.647 0.959 0.952 0.947 0.952 0.980 0.965 0.973 0.919 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
45. T25G3.4 T25G3.4 9394 7.646 0.954 0.931 0.956 0.931 0.983 0.961 0.986 0.944 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
46. F21H12.5 fbf-2 4640 7.645 0.954 0.947 0.949 0.947 0.971 0.945 0.980 0.952 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
47. Y111B2A.2 Y111B2A.2 21569 7.643 0.904 0.965 0.969 0.965 0.981 0.978 0.963 0.918
48. C07E3.2 pro-2 4193 7.642 0.923 0.939 0.936 0.939 0.980 0.974 0.974 0.977 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
49. F29C4.6 tut-1 5637 7.641 0.960 0.951 0.959 0.951 0.969 0.964 0.953 0.934 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
50. Y18D10A.19 fkb-2 48128 7.639 0.973 0.980 0.977 0.980 0.929 0.901 0.939 0.960 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
51. F58B3.5 mars-1 6729 7.638 0.947 0.947 0.979 0.947 0.984 0.959 0.973 0.902 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
52. Y71G12B.8 ddx-27 3584 7.636 0.915 0.954 0.950 0.954 0.968 0.954 0.971 0.970 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
53. Y111B2A.17 elpc-2 3504 7.634 0.969 0.933 0.970 0.933 0.968 0.963 0.970 0.928 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
54. Y54E5A.6 Y54E5A.6 770 7.633 0.944 0.913 0.959 0.913 0.983 0.978 0.978 0.965
55. F55A12.8 nath-10 4253 7.629 0.866 0.948 0.960 0.948 0.985 0.977 0.975 0.970 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
56. C05D11.10 mrps-17 4613 7.624 0.911 0.956 0.963 0.956 0.946 0.966 0.949 0.977 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
57. F22B5.9 fars-3 7209 7.623 0.940 0.964 0.975 0.964 0.934 0.964 0.957 0.925 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
58. C34E10.2 gop-2 5684 7.622 0.916 0.944 0.935 0.944 0.987 0.980 0.958 0.958 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
59. Y71F9B.4 snr-7 13542 7.619 0.939 0.937 0.934 0.937 0.985 0.976 0.948 0.963 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
60. T02G5.9 kars-1 9763 7.619 0.916 0.955 0.958 0.955 0.969 0.962 0.946 0.958 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
61. B0511.8 mrps-30 5050 7.618 0.954 0.953 0.940 0.953 0.948 0.951 0.977 0.942 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
62. C14A4.1 dohh-1 4890 7.614 0.938 0.920 0.958 0.920 0.977 0.993 0.972 0.936 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
63. T01E8.6 mrps-14 9328 7.613 0.936 0.951 0.965 0.951 0.945 0.962 0.946 0.957 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
64. T07D4.4 ddx-19 7234 7.612 0.928 0.939 0.978 0.939 0.951 0.976 0.962 0.939 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
65. F28D1.1 wdr-46 4050 7.612 0.936 0.949 0.932 0.949 0.986 0.962 0.980 0.918 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
66. C34E10.11 mrps-26 4649 7.61 0.926 0.967 0.983 0.967 0.967 0.945 0.932 0.923 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
67. H27M09.2 rpb-5 4744 7.608 0.915 0.903 0.963 0.903 0.989 0.986 0.985 0.964 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
68. T07A9.9 nog-1 19728 7.607 0.945 0.979 0.965 0.979 0.931 0.893 0.946 0.969 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
69. F18A1.8 pid-1 3751 7.607 0.934 0.956 0.920 0.956 0.994 0.993 0.950 0.904 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
70. T13H5.5 mrps-18B 3430 7.606 0.918 0.952 0.958 0.952 0.979 0.969 0.942 0.936 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
71. F58A4.9 rpac-19 2692 7.604 0.918 0.924 0.945 0.924 0.986 0.978 0.951 0.978 Probable DNA-directed RNA polymerases I and III subunit RPAC2 [Source:UniProtKB/Swiss-Prot;Acc:P34476]
72. T21B10.1 mrpl-50 14595 7.604 0.927 0.963 0.969 0.963 0.953 0.962 0.960 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
73. K07F5.15 K07F5.15 10171 7.602 0.939 0.954 0.936 0.954 0.952 0.975 0.927 0.965
74. C27H5.3 fust-1 6978 7.601 0.927 0.947 0.965 0.947 0.945 0.966 0.925 0.979 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
75. F59A2.1 npp-9 34375 7.601 0.910 0.923 0.924 0.923 0.985 0.994 0.981 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
76. F53F4.12 F53F4.12 2683 7.601 0.943 0.890 0.951 0.890 0.977 0.982 0.991 0.977
77. F29C12.4 gfm-1 8964 7.599 0.925 0.953 0.941 0.953 0.963 0.951 0.956 0.957 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
78. Y14H12B.2 Y14H12B.2 6496 7.598 0.898 0.937 0.913 0.937 0.987 0.982 0.962 0.982
79. W08E3.1 snr-2 14849 7.597 0.910 0.947 0.954 0.947 0.948 0.973 0.957 0.961 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
80. Y73B6BL.32 lsm-8 11002 7.597 0.923 0.969 0.955 0.969 0.983 0.927 0.928 0.943 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
81. R13F6.10 cra-1 11610 7.596 0.973 0.946 0.968 0.946 0.932 0.944 0.931 0.956 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
82. Y71G12B.9 lin-65 7476 7.595 0.895 0.931 0.929 0.931 0.989 0.977 0.980 0.963 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
83. C26D10.1 ran-3 11111 7.595 0.867 0.961 0.961 0.961 0.946 0.984 0.974 0.941 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
84. C14A4.4 crn-3 6558 7.592 0.946 0.949 0.949 0.949 0.941 0.952 0.947 0.959 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
85. B0261.4 mrpl-47 8210 7.591 0.966 0.949 0.961 0.949 0.937 0.930 0.962 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
86. F56D2.6 ddx-15 12282 7.59 0.943 0.939 0.934 0.939 0.955 0.958 0.937 0.985 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
87. Y46G5A.4 snrp-200 13827 7.59 0.933 0.951 0.944 0.951 0.962 0.952 0.943 0.954 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
88. Y105E8B.3 riok-2 5531 7.589 0.951 0.956 0.933 0.956 0.981 0.967 0.910 0.935 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
89. T21B10.7 cct-2 13999 7.589 0.930 0.959 0.935 0.959 0.974 0.963 0.949 0.920 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
90. K04C2.3 K04C2.3 23540 7.589 0.968 0.864 0.973 0.864 0.977 0.980 0.978 0.985
91. C56C10.8 icd-1 89788 7.586 0.951 0.961 0.978 0.961 0.932 0.893 0.964 0.946 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
92. T21C9.12 scpl-4 14723 7.585 0.950 0.965 0.979 0.965 0.925 0.954 0.913 0.934 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
93. F14B4.3 rpoa-2 7549 7.585 0.906 0.941 0.906 0.941 0.985 0.982 0.985 0.939 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
94. F56D1.3 mrps-16 2309 7.583 0.932 0.950 0.943 0.950 0.976 0.978 0.926 0.928 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
95. Y47D3A.26 smc-3 6256 7.582 0.894 0.955 0.925 0.955 0.983 0.972 0.961 0.937 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
96. C49H3.10 xpo-3 9101 7.582 0.937 0.960 0.938 0.960 0.951 0.972 0.959 0.905 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
97. F18C5.3 tag-184 4027 7.578 0.906 0.956 0.936 0.956 0.944 0.976 0.983 0.921
98. K08F11.3 cif-1 10218 7.578 0.946 0.959 0.973 0.959 0.921 0.920 0.934 0.966 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
99. K12H4.4 K12H4.4 8351 7.577 0.914 0.939 0.895 0.939 0.966 0.986 0.954 0.984 Probable signal peptidase complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34525]
100. Y37E3.15 npp-13 7250 7.577 0.914 0.934 0.952 0.934 0.977 0.936 0.963 0.967 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA