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Results for F56B3.8

Gene ID Gene Name Reads Transcripts Annotation
F56B3.8 mrpl-2 3195 F56B3.8a, F56B3.8b Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]

Genes with expression patterns similar to F56B3.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F56B3.8 mrpl-2 3195 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
2. C06A1.5 rpb-6 7515 7.736 0.961 0.971 0.954 0.971 0.988 0.977 0.948 0.966 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
3. W06H3.3 ctps-1 8363 7.717 0.957 0.951 0.933 0.951 0.990 0.987 0.968 0.980 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
4. Y116A8C.42 snr-1 17062 7.711 0.955 0.958 0.928 0.958 0.995 0.975 0.971 0.971 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
5. W08E3.1 snr-2 14849 7.701 0.967 0.965 0.953 0.965 0.950 0.965 0.956 0.980 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
6. T01E8.6 mrps-14 9328 7.693 0.945 0.970 0.944 0.970 0.977 0.950 0.970 0.967 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
7. F28H1.3 aars-2 13537 7.677 0.969 0.954 0.942 0.954 0.979 0.976 0.950 0.953 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
8. T10B5.5 cct-7 24616 7.676 0.961 0.956 0.936 0.956 0.973 0.962 0.969 0.963 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
9. W06E11.4 sbds-1 6701 7.672 0.971 0.936 0.958 0.936 0.983 0.958 0.969 0.961 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
10. C14A4.14 mrps-22 7966 7.672 0.921 0.961 0.954 0.961 0.985 0.965 0.943 0.982 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
11. ZK863.6 dpy-30 16177 7.663 0.961 0.959 0.951 0.959 0.983 0.949 0.945 0.956 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
12. ZK742.1 xpo-1 20741 7.662 0.938 0.938 0.961 0.938 0.978 0.983 0.966 0.960 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
13. T13H5.5 mrps-18B 3430 7.661 0.970 0.957 0.925 0.957 0.988 0.980 0.911 0.973 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
14. Y62E10A.11 mdt-9 5971 7.66 0.956 0.931 0.962 0.931 0.986 0.967 0.967 0.960 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
15. R09B3.5 mag-1 7496 7.659 0.933 0.977 0.936 0.977 0.970 0.960 0.950 0.956 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
16. B0464.7 baf-1 10161 7.657 0.977 0.950 0.908 0.950 0.979 0.960 0.960 0.973 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
17. Y71F9B.4 snr-7 13542 7.657 0.947 0.938 0.941 0.938 0.980 0.975 0.961 0.977 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
18. C26D10.1 ran-3 11111 7.656 0.958 0.949 0.935 0.949 0.977 0.972 0.953 0.963 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
19. Y50D7A.9 taco-1 5949 7.651 0.929 0.936 0.946 0.936 0.984 0.985 0.959 0.976 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
20. T06D8.5 cox-15 3892 7.649 0.938 0.950 0.939 0.950 0.982 0.972 0.958 0.960 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
21. T23H2.1 npp-12 12425 7.648 0.946 0.933 0.943 0.933 0.980 0.988 0.967 0.958 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
22. Y73B6BL.32 lsm-8 11002 7.647 0.931 0.956 0.952 0.956 0.988 0.968 0.950 0.946 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
23. D2023.5 mpst-1 10328 7.642 0.932 0.956 0.945 0.956 0.988 0.973 0.931 0.961 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
24. F58E10.3 ddx-17 15107 7.642 0.964 0.945 0.940 0.945 0.964 0.972 0.958 0.954 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
25. Y71G12B.9 lin-65 7476 7.638 0.936 0.949 0.939 0.949 0.979 0.977 0.944 0.965 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
26. C27H5.3 fust-1 6978 7.638 0.971 0.933 0.938 0.933 0.960 0.983 0.982 0.938 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
27. C16C10.4 C16C10.4 3439 7.635 0.941 0.939 0.933 0.939 0.985 0.972 0.955 0.971 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
28. W08E3.3 ola-1 20885 7.635 0.965 0.942 0.948 0.942 0.981 0.949 0.966 0.942 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
29. B0261.4 mrpl-47 8210 7.634 0.924 0.953 0.951 0.953 0.973 0.964 0.941 0.975 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
30. Y53C12B.3 nos-3 20231 7.627 0.956 0.937 0.932 0.937 0.983 0.936 0.966 0.980 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
31. Y54E5A.6 Y54E5A.6 770 7.626 0.942 0.923 0.947 0.923 0.983 0.975 0.952 0.981
32. T28D9.10 snr-3 9995 7.626 0.947 0.938 0.935 0.938 0.990 0.964 0.961 0.953 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
33. Y23H5B.6 Y23H5B.6 5886 7.624 0.951 0.943 0.925 0.943 0.975 0.945 0.968 0.974
34. T24H7.1 phb-2 28775 7.624 0.949 0.954 0.914 0.954 0.965 0.988 0.942 0.958 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
35. R53.2 dtmk-1 6821 7.623 0.928 0.940 0.943 0.940 0.979 0.974 0.955 0.964 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
36. T28D9.2 rsp-5 6460 7.622 0.963 0.955 0.904 0.955 0.975 0.953 0.955 0.962 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
37. F22B5.9 fars-3 7209 7.621 0.960 0.943 0.950 0.943 0.961 0.954 0.954 0.956 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
38. H20J04.5 pfd-2 8082 7.62 0.953 0.953 0.929 0.953 0.972 0.965 0.945 0.950 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
39. ZK1058.4 ccdc-47 8879 7.619 0.960 0.962 0.930 0.962 0.956 0.968 0.923 0.958 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
40. F33D4.5 mrpl-1 5337 7.617 0.932 0.930 0.948 0.930 0.978 0.992 0.937 0.970 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
41. K08F4.2 gtbp-1 25222 7.616 0.952 0.955 0.922 0.955 0.981 0.951 0.928 0.972 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
42. H20J04.8 mog-2 3084 7.616 0.944 0.943 0.944 0.943 0.958 0.965 0.941 0.978 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
43. F59A2.1 npp-9 34375 7.615 0.962 0.920 0.926 0.920 0.980 0.978 0.959 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
44. B0205.11 mrpl-9 9162 7.614 0.921 0.926 0.964 0.926 0.981 0.968 0.974 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
45. Y41D4B.19 npp-8 12992 7.613 0.948 0.943 0.938 0.943 0.973 0.973 0.963 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
46. C26E6.4 rpb-2 7053 7.612 0.926 0.952 0.944 0.952 0.969 0.981 0.929 0.959 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
47. R07E5.14 rnp-4 11659 7.611 0.955 0.920 0.943 0.920 0.993 0.964 0.949 0.967 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
48. K01G5.4 ran-1 32379 7.608 0.961 0.934 0.926 0.934 0.965 0.970 0.951 0.967 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
49. F32H2.1 snpc-4 7581 7.607 0.951 0.951 0.900 0.951 0.975 0.967 0.955 0.957 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
50. F26F4.11 rpb-8 7601 7.607 0.939 0.920 0.940 0.920 0.990 0.975 0.951 0.972 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
51. Y37D8A.9 mrg-1 14369 7.606 0.946 0.929 0.900 0.929 0.989 0.981 0.957 0.975 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
52. C34E10.2 gop-2 5684 7.605 0.973 0.930 0.943 0.930 0.987 0.927 0.958 0.957 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
53. T21B10.7 cct-2 13999 7.603 0.968 0.958 0.930 0.958 0.976 0.952 0.921 0.940 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
54. C33H5.12 rsp-6 23342 7.602 0.969 0.957 0.926 0.957 0.956 0.963 0.926 0.948 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
55. C34E10.11 mrps-26 4649 7.601 0.920 0.966 0.937 0.966 0.948 0.960 0.956 0.948 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
56. T02G5.9 kars-1 9763 7.6 0.945 0.955 0.931 0.955 0.978 0.971 0.926 0.939 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
57. Y56A3A.19 Y56A3A.19 9680 7.6 0.918 0.938 0.914 0.938 0.976 0.978 0.963 0.975 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
58. Y49A3A.5 cyn-1 6411 7.599 0.922 0.927 0.923 0.927 0.984 0.977 0.967 0.972 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
59. K08F11.3 cif-1 10218 7.597 0.973 0.949 0.955 0.949 0.946 0.941 0.927 0.957 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
60. ZK652.1 snr-5 5993 7.595 0.929 0.951 0.958 0.951 0.951 0.968 0.939 0.948 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
61. Y37E3.15 npp-13 7250 7.594 0.956 0.927 0.928 0.927 0.991 0.968 0.959 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
62. R12C12.2 ran-5 14517 7.594 0.967 0.909 0.941 0.909 0.983 0.973 0.963 0.949 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
63. F58B3.5 mars-1 6729 7.593 0.953 0.952 0.956 0.952 0.987 0.970 0.931 0.892 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
64. F58D5.1 hrp-2 17211 7.591 0.974 0.955 0.917 0.955 0.961 0.958 0.941 0.930 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
65. F53G2.7 mnat-1 10966 7.59 0.932 0.966 0.950 0.966 0.984 0.951 0.941 0.900 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
66. F56D2.6 ddx-15 12282 7.59 0.926 0.942 0.947 0.942 0.976 0.973 0.914 0.970 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
67. C08F8.1 pfd-1 10199 7.59 0.948 0.931 0.945 0.931 0.981 0.968 0.947 0.939 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
68. C34E10.5 prmt-5 12277 7.59 0.943 0.959 0.944 0.959 0.964 0.951 0.931 0.939 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
69. T21B10.1 mrpl-50 14595 7.589 0.952 0.961 0.947 0.961 0.963 0.962 0.918 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
70. Y14H12B.2 Y14H12B.2 6496 7.587 0.958 0.955 0.929 0.955 0.958 0.941 0.925 0.966
71. Y37E3.3 rpb-10 4051 7.586 0.944 0.919 0.889 0.919 0.990 0.975 0.975 0.975 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
72. F52F12.4 lsl-1 4055 7.585 0.941 0.937 0.930 0.937 0.953 0.973 0.967 0.947 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
73. Y116A8C.34 cyn-13 2972 7.585 0.963 0.930 0.921 0.930 0.950 0.974 0.955 0.962 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
74. Y54E5A.4 npp-4 6288 7.584 0.954 0.939 0.922 0.939 0.972 0.946 0.960 0.952 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
75. T16G1.11 eif-3.K 14014 7.583 0.975 0.940 0.937 0.940 0.953 0.966 0.929 0.943 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
76. F42A6.7 hrp-1 28201 7.581 0.978 0.939 0.936 0.939 0.962 0.932 0.947 0.948 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
77. ZK1251.9 dcaf-1 10926 7.579 0.942 0.930 0.924 0.930 0.980 0.972 0.950 0.951 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
78. B0511.8 mrps-30 5050 7.579 0.905 0.940 0.964 0.940 0.975 0.964 0.951 0.940 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
79. F55H2.6 clu-1 21404 7.578 0.904 0.953 0.904 0.953 0.978 0.981 0.949 0.956 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
80. F33D4.8 mrps-24 2853 7.577 0.919 0.944 0.934 0.944 0.969 0.965 0.947 0.955 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
81. ZC410.2 mppb-1 3991 7.577 0.946 0.918 0.931 0.918 0.984 0.975 0.956 0.949 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
82. K08E7.1 eak-7 18960 7.576 0.936 0.930 0.898 0.930 0.976 0.955 0.983 0.968 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
83. T10F2.4 prp-19 11298 7.576 0.964 0.959 0.939 0.959 0.943 0.924 0.920 0.968 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
84. Y22D7AL.5 hsp-60 42542 7.576 0.926 0.954 0.921 0.954 0.956 0.962 0.943 0.960 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
85. C30C11.1 mrpl-32 5238 7.576 0.899 0.922 0.954 0.922 0.981 0.992 0.930 0.976 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
86. C25A1.4 C25A1.4 15507 7.574 0.940 0.960 0.908 0.960 0.987 0.938 0.980 0.901
87. Y17G7A.1 hmg-12 29989 7.574 0.960 0.931 0.952 0.931 0.975 0.971 0.931 0.923 HMG [Source:RefSeq peptide;Acc:NP_496544]
88. F56D12.5 vig-1 42594 7.573 0.941 0.944 0.915 0.944 0.971 0.954 0.950 0.954 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
89. Y43F8C.8 mrps-28 4036 7.571 0.957 0.949 0.922 0.949 0.965 0.957 0.912 0.960 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_507808]
90. F29C12.4 gfm-1 8964 7.57 0.907 0.958 0.914 0.958 0.983 0.975 0.942 0.933 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
91. ZK550.4 ZK550.4 5815 7.569 0.941 0.930 0.950 0.930 0.982 0.978 0.906 0.952 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
92. M88.5 zbp-1 11851 7.568 0.961 0.959 0.942 0.959 0.970 0.909 0.928 0.940 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
93. F32A5.7 lsm-4 3785 7.568 0.958 0.941 0.919 0.941 0.969 0.954 0.948 0.938 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
94. C08B11.5 sap-49 10553 7.566 0.957 0.933 0.931 0.933 0.951 0.964 0.939 0.958 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
95. F28B3.8 imb-1 7515 7.563 0.938 0.953 0.943 0.953 0.960 0.916 0.938 0.962 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
96. C47B2.9 C47B2.9 4096 7.562 0.965 0.933 0.942 0.933 0.971 0.982 0.944 0.892
97. F59A2.3 cri-3 15077 7.56 0.921 0.944 0.918 0.944 0.969 0.976 0.927 0.961 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
98. Y73B6BL.33 hrpf-2 4443 7.559 0.946 0.944 0.939 0.944 0.970 0.925 0.938 0.953 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
99. H27M09.2 rpb-5 4744 7.559 0.959 0.897 0.948 0.897 0.970 0.956 0.961 0.971 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
100. Y49E10.15 snr-6 8505 7.555 0.944 0.929 0.875 0.929 0.987 0.967 0.962 0.962 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA