C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y47D3A.26

Gene ID Gene Name Reads Transcripts Annotation
Y47D3A.26 smc-3 6256 Y47D3A.26a, Y47D3A.26b, Y47D3A.26c Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]

Genes with expression patterns similar to Y47D3A.26

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y47D3A.26 smc-3 6256 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
2. T28D9.2 rsp-5 6460 7.791 0.950 0.980 0.985 0.980 0.975 0.987 0.974 0.960 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
3. Y41D4B.19 npp-8 12992 7.789 0.954 0.983 0.991 0.983 0.983 0.968 0.970 0.957 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
4. C34E10.2 gop-2 5684 7.763 0.943 0.976 0.982 0.976 0.967 0.974 0.971 0.974 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
5. F59A2.1 npp-9 34375 7.76 0.964 0.967 0.969 0.967 0.974 0.975 0.974 0.970 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
6. F14B4.3 rpoa-2 7549 7.749 0.957 0.977 0.981 0.977 0.985 0.970 0.937 0.965 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
7. Y37D8A.11 cec-7 8801 7.736 0.960 0.984 0.986 0.984 0.978 0.962 0.978 0.904 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
8. Y71G12B.9 lin-65 7476 7.733 0.951 0.984 0.982 0.984 0.988 0.953 0.952 0.939 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
9. C25A1.4 C25A1.4 15507 7.732 0.897 0.985 0.975 0.985 0.985 0.972 0.980 0.953
10. Y23H5B.6 Y23H5B.6 5886 7.721 0.959 0.979 0.975 0.979 0.953 0.970 0.953 0.953
11. Y14H12B.2 Y14H12B.2 6496 7.72 0.941 0.976 0.985 0.976 0.973 0.970 0.953 0.946
12. Y53C12B.3 nos-3 20231 7.717 0.933 0.984 0.983 0.984 0.970 0.934 0.962 0.967 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. K09H9.6 lpd-6 5459 7.715 0.918 0.971 0.967 0.971 0.978 0.977 0.955 0.978 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
14. B0035.12 sart-3 7188 7.714 0.944 0.974 0.977 0.974 0.980 0.964 0.940 0.961 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
15. Y37D8A.9 mrg-1 14369 7.711 0.944 0.971 0.966 0.971 0.981 0.951 0.971 0.956 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
16. Y116A8C.42 snr-1 17062 7.71 0.916 0.985 0.976 0.985 0.972 0.932 0.979 0.965 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
17. C26D10.1 ran-3 11111 7.709 0.948 0.985 0.969 0.985 0.932 0.951 0.954 0.985 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
18. F55G1.8 plk-3 12036 7.707 0.961 0.960 0.986 0.960 0.974 0.961 0.944 0.961 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
19. F23F1.1 nfyc-1 9983 7.704 0.945 0.973 0.982 0.973 0.985 0.963 0.953 0.930 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
20. C06A1.5 rpb-6 7515 7.703 0.943 0.975 0.951 0.975 0.972 0.954 0.982 0.951 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
21. ZK381.1 him-3 4913 7.7 0.933 0.976 0.975 0.976 0.956 0.975 0.948 0.961 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
22. C04G2.6 dis-3 5048 7.699 0.970 0.982 0.976 0.982 0.977 0.958 0.925 0.929 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
23. W06E11.4 sbds-1 6701 7.695 0.937 0.974 0.966 0.974 0.975 0.966 0.943 0.960 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
24. C23G10.8 C23G10.8 4642 7.691 0.929 0.967 0.980 0.967 0.977 0.965 0.944 0.962
25. Y73B6BL.33 hrpf-2 4443 7.69 0.915 0.969 0.969 0.969 0.961 0.964 0.971 0.972 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
26. W08E3.1 snr-2 14849 7.687 0.920 0.976 0.970 0.976 0.954 0.953 0.977 0.961 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
27. T23H2.1 npp-12 12425 7.687 0.965 0.969 0.978 0.969 0.943 0.954 0.947 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
28. F53A2.4 nud-1 7818 7.685 0.898 0.958 0.981 0.958 0.977 0.976 0.966 0.971 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
29. F32H2.1 snpc-4 7581 7.685 0.953 0.982 0.973 0.982 0.940 0.944 0.952 0.959 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
30. F26B1.3 ima-2 18826 7.685 0.954 0.955 0.974 0.955 0.966 0.938 0.968 0.975 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
31. F52F12.4 lsl-1 4055 7.684 0.944 0.976 0.969 0.976 0.972 0.947 0.972 0.928 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
32. R06F6.1 cdl-1 14167 7.683 0.905 0.959 0.958 0.959 0.977 0.974 0.974 0.977 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
33. C07H6.5 cgh-1 60576 7.679 0.952 0.943 0.976 0.943 0.981 0.969 0.956 0.959 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
34. D2030.6 prg-1 26751 7.678 0.948 0.969 0.992 0.969 0.931 0.963 0.952 0.954 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
35. T01E8.6 mrps-14 9328 7.678 0.900 0.985 0.939 0.985 0.951 0.976 0.975 0.967 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
36. C26E6.7 eri-9 8069 7.677 0.927 0.968 0.957 0.968 0.976 0.966 0.974 0.941 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
37. CC4.3 smu-1 4169 7.677 0.918 0.966 0.971 0.966 0.984 0.961 0.949 0.962 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
38. T12E12.2 cec-6 4758 7.677 0.927 0.970 0.987 0.970 0.953 0.940 0.989 0.941 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
39. F52C9.7 mog-3 9880 7.676 0.942 0.964 0.986 0.964 0.989 0.939 0.952 0.940 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
40. Y39G10AR.7 ekl-7 7072 7.675 0.941 0.966 0.972 0.966 0.944 0.970 0.972 0.944
41. F09F7.3 rpc-2 9751 7.673 0.927 0.964 0.961 0.964 0.976 0.958 0.944 0.979 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
42. W02D9.3 hmg-20 2693 7.672 0.933 0.973 0.979 0.973 0.974 0.952 0.968 0.920 HMG [Source:RefSeq peptide;Acc:NP_493178]
43. K07A1.11 rba-1 3421 7.671 0.971 0.950 0.974 0.950 0.967 0.940 0.944 0.975 Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]
44. Y39E4B.2 snpc-1.2 5800 7.669 0.972 0.958 0.973 0.958 0.971 0.958 0.949 0.930 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
45. F28D1.1 wdr-46 4050 7.667 0.933 0.974 0.958 0.974 0.974 0.954 0.944 0.956 WD Repeat protein [Source:RefSeq peptide;Acc:NP_502358]
46. M01E11.5 cey-3 20931 7.666 0.923 0.962 0.981 0.962 0.979 0.970 0.955 0.934 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
47. K08F4.2 gtbp-1 25222 7.665 0.903 0.981 0.962 0.981 0.966 0.947 0.968 0.957 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
48. B0414.5 cpb-3 11584 7.664 0.944 0.969 0.983 0.969 0.970 0.965 0.967 0.897 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
49. W06H3.3 ctps-1 8363 7.66 0.876 0.976 0.959 0.976 0.971 0.953 0.971 0.978 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
50. T23G11.3 gld-1 41748 7.66 0.893 0.979 0.976 0.979 0.972 0.975 0.953 0.933 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
51. Y75B8A.22 tim-1 2124 7.66 0.908 0.951 0.964 0.951 0.974 0.966 0.984 0.962 Protein timeless homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDN3]
52. F18C5.2 wrn-1 3792 7.658 0.949 0.972 0.980 0.972 0.972 0.948 0.899 0.966 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
53. F55A12.8 nath-10 4253 7.657 0.913 0.969 0.951 0.969 0.984 0.951 0.949 0.971 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
54. K01G5.4 ran-1 32379 7.657 0.940 0.979 0.973 0.979 0.934 0.931 0.972 0.949 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
55. F21C3.4 rde-2 6286 7.657 0.902 0.974 0.974 0.974 0.980 0.972 0.941 0.940
56. Y113G7B.5 fog-2 2753 7.656 0.900 0.962 0.970 0.962 0.964 0.947 0.980 0.971 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
57. F56F3.1 ifet-1 25772 7.656 0.871 0.968 0.972 0.968 0.966 0.960 0.977 0.974 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
58. Y46G5A.4 snrp-200 13827 7.655 0.951 0.977 0.986 0.977 0.964 0.935 0.940 0.925 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
59. ZK1128.6 ttll-4 6059 7.654 0.924 0.974 0.978 0.974 0.983 0.958 0.916 0.947 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
60. H27M09.3 syp-4 5331 7.654 0.951 0.977 0.941 0.977 0.965 0.944 0.971 0.928
61. Y17G7A.1 hmg-12 29989 7.652 0.945 0.979 0.975 0.979 0.951 0.932 0.952 0.939 HMG [Source:RefSeq peptide;Acc:NP_496544]
62. K01G5.1 rnf-113 4336 7.652 0.924 0.961 0.957 0.961 0.975 0.949 0.958 0.967 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
63. F56D1.7 daz-1 23684 7.652 0.957 0.983 0.992 0.983 0.914 0.927 0.951 0.945 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
64. Y62E10A.11 mdt-9 5971 7.652 0.919 0.978 0.963 0.978 0.947 0.941 0.962 0.964 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
65. C34E10.5 prmt-5 12277 7.652 0.916 0.977 0.984 0.977 0.951 0.968 0.939 0.940 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
66. C49H3.10 xpo-3 9101 7.651 0.959 0.964 0.985 0.964 0.954 0.966 0.945 0.914 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
67. C14B1.4 wdr-5.1 4424 7.65 0.937 0.976 0.966 0.976 0.955 0.942 0.958 0.940 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
68. C34D4.12 cyn-12 7363 7.649 0.921 0.961 0.970 0.961 0.975 0.979 0.967 0.915 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
69. T19B4.2 npp-7 13073 7.648 0.935 0.964 0.978 0.964 0.939 0.956 0.965 0.947 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
70. F28B3.8 imb-1 7515 7.648 0.960 0.969 0.959 0.969 0.951 0.953 0.965 0.922 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
71. C08B11.5 sap-49 10553 7.647 0.910 0.977 0.957 0.977 0.939 0.953 0.957 0.977 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
72. K01G5.2 hpl-2 6781 7.646 0.930 0.967 0.984 0.967 0.975 0.952 0.915 0.956 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
73. F28C6.6 suf-1 3642 7.645 0.962 0.972 0.960 0.972 0.959 0.957 0.918 0.945 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
74. Y18D10A.16 Y18D10A.16 2881 7.644 0.962 0.933 0.975 0.933 0.948 0.969 0.956 0.968
75. C26B2.6 elpc-4 3600 7.643 0.890 0.959 0.944 0.959 0.981 0.979 0.970 0.961 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
76. K04C2.3 K04C2.3 23540 7.642 0.921 0.950 0.937 0.950 0.970 0.979 0.977 0.958
77. F53F10.5 npp-11 3378 7.642 0.914 0.958 0.968 0.958 0.933 0.977 0.966 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
78. F53A3.2 polh-1 2467 7.642 0.955 0.947 0.970 0.947 0.959 0.950 0.963 0.951 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
79. Y41D4B.13 ced-2 10100 7.641 0.944 0.947 0.980 0.947 0.977 0.944 0.941 0.961 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
80. Y54E5A.4 npp-4 6288 7.64 0.922 0.973 0.984 0.973 0.955 0.935 0.966 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
81. T25G3.4 T25G3.4 9394 7.639 0.938 0.966 0.963 0.966 0.974 0.938 0.944 0.950 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
82. JC8.6 lin-54 5789 7.639 0.956 0.953 0.962 0.953 0.975 0.941 0.934 0.965
83. B0414.3 hil-5 10816 7.634 0.924 0.964 0.987 0.964 0.963 0.938 0.982 0.912 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
84. F56D2.6 ddx-15 12282 7.633 0.951 0.977 0.981 0.977 0.942 0.933 0.915 0.957 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
85. F58E10.3 ddx-17 15107 7.633 0.940 0.978 0.980 0.978 0.927 0.946 0.947 0.937 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
86. C01F6.8 icln-1 6586 7.632 0.929 0.970 0.977 0.970 0.967 0.954 0.968 0.897 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
87. F10G7.1 tag-151 9031 7.632 0.893 0.962 0.954 0.962 0.987 0.940 0.958 0.976 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
88. C26E6.4 rpb-2 7053 7.631 0.918 0.985 0.964 0.985 0.936 0.954 0.953 0.936 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
89. K02F3.11 rnp-5 6205 7.631 0.929 0.961 0.983 0.961 0.936 0.968 0.942 0.951 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
90. K12C11.2 smo-1 12784 7.631 0.941 0.963 0.947 0.963 0.949 0.928 0.979 0.961 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
91. C07E3.2 pro-2 4193 7.631 0.885 0.966 0.974 0.966 0.974 0.957 0.952 0.957 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
92. F32E10.1 nol-10 3225 7.629 0.919 0.962 0.964 0.962 0.961 0.961 0.935 0.965 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
93. T21B10.1 mrpl-50 14595 7.628 0.921 0.983 0.961 0.983 0.962 0.954 0.963 0.901 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
94. T21B10.7 cct-2 13999 7.627 0.918 0.976 0.966 0.976 0.974 0.954 0.947 0.916 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
95. C18E9.3 szy-20 6819 7.627 0.917 0.958 0.981 0.958 0.984 0.964 0.947 0.918 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
96. C37A2.4 cye-1 4158 7.627 0.905 0.944 0.979 0.944 0.973 0.965 0.955 0.962 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
97. C36A4.5 maph-1.3 15493 7.627 0.918 0.952 0.962 0.952 0.989 0.940 0.955 0.959 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
98. F10E9.7 F10E9.7 1842 7.625 0.929 0.942 0.976 0.942 0.969 0.959 0.949 0.959
99. F44G4.4 tdp-1 3335 7.625 0.909 0.953 0.942 0.953 0.966 0.976 0.950 0.976 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
100. T09E8.2 him-17 4153 7.624 0.942 0.973 0.966 0.973 0.980 0.954 0.879 0.957 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]

There are 3057 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA