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Results for Y40G12A.1

Gene ID Gene Name Reads Transcripts Annotation
Y40G12A.1 ubh-3 4142 Y40G12A.1 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]

Genes with expression patterns similar to Y40G12A.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y40G12A.1 ubh-3 4142 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
2. W08E3.1 snr-2 14849 7.746 0.968 0.961 0.975 0.961 0.976 0.978 0.953 0.974 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
3. D2023.5 mpst-1 10328 7.737 0.972 0.955 0.971 0.955 0.976 0.977 0.966 0.965 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
4. C34E10.2 gop-2 5684 7.706 0.944 0.983 0.957 0.983 0.964 0.979 0.937 0.959 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
5. K08F4.2 gtbp-1 25222 7.704 0.963 0.972 0.967 0.972 0.957 0.962 0.972 0.939 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
6. T28D9.10 snr-3 9995 7.696 0.975 0.967 0.964 0.967 0.972 0.982 0.950 0.919 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
7. Y92H12BR.8 mrpl-15 6344 7.693 0.946 0.954 0.970 0.954 0.964 0.985 0.952 0.968 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490854]
8. F43G9.5 cfim-1 9169 7.692 0.958 0.954 0.945 0.954 0.978 0.984 0.975 0.944 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
9. R07E5.14 rnp-4 11659 7.691 0.959 0.964 0.959 0.964 0.963 0.988 0.958 0.936 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
10. Y71F9B.4 snr-7 13542 7.679 0.970 0.945 0.943 0.945 0.976 0.980 0.942 0.978 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
11. T21B10.1 mrpl-50 14595 7.677 0.963 0.976 0.987 0.976 0.973 0.972 0.925 0.905 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
12. F01F1.8 cct-6 29460 7.674 0.960 0.976 0.972 0.976 0.920 0.974 0.971 0.925 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
13. F26F4.11 rpb-8 7601 7.667 0.973 0.967 0.946 0.967 0.971 0.980 0.898 0.965 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
14. T21B10.7 cct-2 13999 7.661 0.959 0.965 0.973 0.965 0.970 0.970 0.926 0.933 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
15. Y62E10A.12 lsm-3 4322 7.658 0.948 0.938 0.972 0.938 0.942 0.984 0.953 0.983 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
16. W06H3.3 ctps-1 8363 7.654 0.972 0.954 0.957 0.954 0.967 0.976 0.908 0.966 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
17. F09G2.9 attf-2 14771 7.653 0.949 0.977 0.936 0.977 0.955 0.975 0.958 0.926 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
18. W06E11.4 sbds-1 6701 7.652 0.946 0.962 0.981 0.962 0.967 0.977 0.900 0.957 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
19. C07G2.3 cct-5 44703 7.652 0.966 0.970 0.984 0.970 0.925 0.957 0.954 0.926 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
20. C34D4.12 cyn-12 7363 7.648 0.951 0.957 0.941 0.957 0.971 0.967 0.943 0.961 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
21. C49H3.10 xpo-3 9101 7.647 0.927 0.962 0.967 0.962 0.955 0.982 0.945 0.947 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
22. Y73B6BL.32 lsm-8 11002 7.647 0.977 0.972 0.979 0.972 0.950 0.963 0.899 0.935 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
23. F21C3.4 rde-2 6286 7.646 0.938 0.964 0.958 0.964 0.943 0.973 0.951 0.955
24. C25A1.13 mrpl-34 3170 7.642 0.957 0.938 0.967 0.938 0.950 0.965 0.957 0.970 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
25. C06A1.5 rpb-6 7515 7.64 0.955 0.959 0.968 0.959 0.948 0.961 0.912 0.978 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
26. T23G11.3 gld-1 41748 7.64 0.952 0.956 0.966 0.956 0.940 0.963 0.967 0.940 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
27. Y116A8C.42 snr-1 17062 7.638 0.966 0.969 0.971 0.969 0.951 0.953 0.948 0.911 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
28. D2096.8 nap-1 59459 7.635 0.936 0.951 0.953 0.951 0.960 0.936 0.977 0.971 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
29. T25G3.4 T25G3.4 9394 7.635 0.953 0.973 0.986 0.973 0.951 0.982 0.942 0.875 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
30. Y54H5A.2 Y54H5A.2 2168 7.634 0.938 0.918 0.981 0.918 0.962 0.978 0.969 0.970
31. ZK863.6 dpy-30 16177 7.628 0.947 0.970 0.979 0.970 0.959 0.944 0.956 0.903 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
32. Y14H12B.2 Y14H12B.2 6496 7.627 0.922 0.963 0.954 0.963 0.919 0.981 0.956 0.969
33. Y39B6A.35 tgt-2 2364 7.627 0.956 0.950 0.921 0.950 0.978 0.946 0.958 0.968 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
34. Y54E5A.6 Y54E5A.6 770 7.626 0.941 0.943 0.976 0.943 0.946 0.982 0.919 0.976
35. B0205.9 B0205.9 3651 7.624 0.958 0.953 0.940 0.953 0.967 0.975 0.964 0.914
36. C14A4.5 crn-5 1759 7.622 0.949 0.951 0.933 0.951 0.968 0.974 0.944 0.952 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
37. K07A1.12 lin-53 15817 7.615 0.905 0.960 0.935 0.960 0.954 0.989 0.968 0.944 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
38. B0205.11 mrpl-9 9162 7.614 0.972 0.963 0.976 0.963 0.950 0.963 0.897 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
39. Y53C12B.3 nos-3 20231 7.613 0.941 0.975 0.970 0.975 0.944 0.934 0.919 0.955 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
40. H20J04.8 mog-2 3084 7.606 0.973 0.974 0.956 0.974 0.919 0.952 0.908 0.950 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
41. F43C1.6 mrpl-21 2778 7.604 0.947 0.951 0.951 0.951 0.941 0.979 0.942 0.942 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
42. F59A2.1 npp-9 34375 7.603 0.928 0.961 0.950 0.961 0.948 0.981 0.951 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
43. C26D10.1 ran-3 11111 7.603 0.893 0.978 0.975 0.978 0.948 0.969 0.916 0.946 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
44. Y62E10A.11 mdt-9 5971 7.602 0.975 0.969 0.962 0.969 0.939 0.986 0.891 0.911 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
45. T06D8.5 cox-15 3892 7.602 0.942 0.952 0.944 0.952 0.976 0.931 0.949 0.956 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
46. C08F8.1 pfd-1 10199 7.6 0.975 0.952 0.953 0.952 0.950 0.977 0.910 0.931 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
47. C48B6.3 C48B6.3 6610 7.599 0.944 0.924 0.956 0.924 0.935 0.990 0.976 0.950
48. F56D1.3 mrps-16 2309 7.598 0.966 0.961 0.954 0.961 0.952 0.962 0.929 0.913 Probable 28S ribosomal protein S16, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q10129]
49. Y56A3A.19 Y56A3A.19 9680 7.594 0.952 0.923 0.931 0.923 0.977 0.988 0.922 0.978 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
50. T01E8.6 mrps-14 9328 7.594 0.980 0.966 0.970 0.966 0.932 0.972 0.866 0.942 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
51. F53A2.4 nud-1 7818 7.593 0.972 0.935 0.960 0.935 0.943 0.979 0.953 0.916 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
52. F59A2.3 cri-3 15077 7.593 0.952 0.937 0.936 0.937 0.964 0.981 0.965 0.921 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
53. Y55F3AM.12 dcap-1 8679 7.59 0.951 0.966 0.941 0.966 0.954 0.964 0.961 0.887 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
54. K01G5.2 hpl-2 6781 7.588 0.911 0.952 0.968 0.952 0.958 0.956 0.955 0.936 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
55. C18E9.3 szy-20 6819 7.587 0.937 0.954 0.957 0.954 0.973 0.971 0.937 0.904 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
56. K11H3.6 mrpl-36 7328 7.587 0.955 0.956 0.955 0.956 0.937 0.960 0.936 0.932 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
57. C01F6.8 icln-1 6586 7.587 0.946 0.950 0.952 0.950 0.940 0.980 0.950 0.919 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
58. Y40B1B.8 Y40B1B.8 4877 7.587 0.946 0.949 0.956 0.949 0.919 0.981 0.918 0.969
59. F41G3.14 exos-8 2300 7.586 0.951 0.955 0.902 0.955 0.951 0.967 0.952 0.953 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
60. R09B3.5 mag-1 7496 7.585 0.962 0.953 0.964 0.953 0.944 0.964 0.907 0.938 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
61. T10G3.6 gut-2 3374 7.584 0.948 0.951 0.941 0.951 0.975 0.970 0.901 0.947
62. Y54E10BR.5 Y54E10BR.5 10734 7.582 0.906 0.963 0.931 0.963 0.947 0.986 0.973 0.913 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]
63. Y37D8A.9 mrg-1 14369 7.58 0.906 0.967 0.920 0.967 0.974 0.974 0.915 0.957 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
64. ZC410.2 mppb-1 3991 7.578 0.954 0.950 0.927 0.950 0.956 0.960 0.941 0.940 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
65. M01E11.5 cey-3 20931 7.578 0.959 0.936 0.950 0.936 0.953 0.944 0.974 0.926 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
66. C30C11.1 mrpl-32 5238 7.577 0.944 0.952 0.979 0.952 0.945 0.958 0.921 0.926 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
67. C17H12.13 anat-1 12995 7.577 0.940 0.979 0.947 0.979 0.951 0.952 0.968 0.861 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
68. Y50D7A.9 taco-1 5949 7.574 0.954 0.932 0.966 0.932 0.953 0.964 0.928 0.945 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
69. R12E2.12 mrps-6 4708 7.573 0.942 0.920 0.937 0.920 0.955 0.976 0.951 0.972 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
70. C14A4.14 mrps-22 7966 7.572 0.949 0.971 0.954 0.971 0.921 0.975 0.896 0.935 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
71. B0035.4 pfd-4 5006 7.572 0.963 0.946 0.946 0.946 0.933 0.933 0.955 0.950 Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q17435]
72. T05C12.7 cct-1 41264 7.569 0.971 0.967 0.970 0.967 0.916 0.931 0.933 0.914 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
73. H27M09.2 rpb-5 4744 7.568 0.958 0.947 0.959 0.947 0.913 0.992 0.929 0.923 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
74. B0261.4 mrpl-47 8210 7.568 0.953 0.957 0.967 0.957 0.929 0.947 0.898 0.960 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
75. B0035.12 sart-3 7188 7.568 0.941 0.962 0.964 0.962 0.933 0.957 0.910 0.939 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
76. Y49E10.15 snr-6 8505 7.567 0.970 0.923 0.873 0.923 0.984 0.989 0.941 0.964 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
77. F14B4.3 rpoa-2 7549 7.567 0.854 0.972 0.941 0.972 0.955 0.962 0.944 0.967 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
78. Y55F3AM.1 mrps-25 4611 7.566 0.938 0.899 0.957 0.899 0.980 0.981 0.957 0.955 Probable 28S ribosomal protein S25, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N361]
79. T13H5.5 mrps-18B 3430 7.566 0.952 0.941 0.952 0.941 0.947 0.979 0.906 0.948 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
80. C17G10.2 C17G10.2 2288 7.563 0.953 0.954 0.926 0.954 0.953 0.957 0.953 0.913
81. Y18D10A.17 car-1 87364 7.563 0.959 0.954 0.952 0.954 0.874 0.951 0.980 0.939 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
82. E02H1.2 E02H1.2 2194 7.562 0.932 0.935 0.951 0.935 0.938 0.974 0.939 0.958 Uncharacterized GTP-binding protein E02H1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09523]
83. B0303.15 mrpl-11 9889 7.562 0.969 0.933 0.972 0.933 0.950 0.973 0.909 0.923 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
84. F10G7.1 tag-151 9031 7.559 0.906 0.948 0.978 0.948 0.957 0.957 0.921 0.944 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
85. C52E4.3 snr-4 19308 7.558 0.971 0.959 0.958 0.959 0.933 0.958 0.881 0.939 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
86. C05C8.5 C05C8.5 2655 7.555 0.946 0.932 0.937 0.932 0.955 0.969 0.916 0.968
87. Y48B6A.3 xrn-2 4881 7.555 0.923 0.925 0.961 0.925 0.928 0.962 0.954 0.977 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
88. Y41D4B.19 npp-8 12992 7.554 0.900 0.970 0.958 0.970 0.964 0.975 0.934 0.883 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
89. T02G5.9 kars-1 9763 7.554 0.975 0.959 0.971 0.959 0.919 0.952 0.905 0.914 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
90. F13G3.11 mrpl-13 6024 7.552 0.949 0.947 0.924 0.947 0.960 0.984 0.914 0.927 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
91. C48B4.7 C48B4.7 4006 7.551 0.961 0.918 0.934 0.918 0.970 0.920 0.970 0.960
92. C15H11.9 rrbs-1 9177 7.55 0.913 0.937 0.962 0.937 0.947 0.973 0.932 0.949 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
93. C26B2.6 elpc-4 3600 7.549 0.944 0.939 0.941 0.939 0.952 0.968 0.929 0.937 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
94. Y57A10A.25 parn-2 2634 7.548 0.932 0.959 0.954 0.959 0.928 0.933 0.956 0.927 PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]
95. R13A5.12 lpd-7 10476 7.548 0.945 0.953 0.927 0.953 0.927 0.973 0.922 0.948 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
96. C07H6.5 cgh-1 60576 7.546 0.911 0.931 0.936 0.931 0.958 0.962 0.979 0.938 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
97. Y111B2A.17 elpc-2 3504 7.545 0.917 0.958 0.962 0.958 0.894 0.974 0.928 0.954 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
98. C16A11.3 C16A11.3 3250 7.544 0.961 0.943 0.921 0.943 0.980 0.973 0.921 0.902
99. R09B3.1 exo-3 4401 7.543 0.959 0.927 0.940 0.927 0.961 0.935 0.965 0.929 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
100. ZK652.1 snr-5 5993 7.542 0.960 0.963 0.971 0.963 0.881 0.966 0.913 0.925 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA