C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54E10A.7

Gene ID Gene Name Reads Transcripts Annotation
Y54E10A.7 mrpl-17 2791 Y54E10A.7 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]

Genes with expression patterns similar to Y54E10A.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54E10A.7 mrpl-17 2791 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
2. ZK652.1 snr-5 5993 7.62 0.972 0.947 0.925 0.947 0.949 0.961 0.944 0.975 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
3. C34E10.11 mrps-26 4649 7.606 0.961 0.958 0.968 0.958 0.901 0.965 0.959 0.936 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
4. T24H7.1 phb-2 28775 7.604 0.943 0.933 0.936 0.933 0.953 0.977 0.976 0.953 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
5. T02G5.9 kars-1 9763 7.603 0.960 0.929 0.934 0.929 0.957 0.963 0.964 0.967 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
6. T01E8.6 mrps-14 9328 7.602 0.944 0.950 0.944 0.950 0.980 0.957 0.941 0.936 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
7. Y49E10.15 snr-6 8505 7.601 0.960 0.930 0.922 0.930 0.960 0.976 0.971 0.952 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
8. F59A2.3 cri-3 15077 7.6 0.964 0.919 0.925 0.919 0.968 0.955 0.984 0.966 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
9. T23B12.3 mrps-2 5434 7.594 0.951 0.923 0.939 0.923 0.977 0.947 0.963 0.971 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]
10. Y37E3.9 phb-1 29211 7.588 0.966 0.921 0.920 0.921 0.983 0.966 0.953 0.958 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
11. W06H3.3 ctps-1 8363 7.587 0.953 0.954 0.919 0.954 0.961 0.964 0.955 0.927 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
12. C25A1.13 mrpl-34 3170 7.585 0.942 0.898 0.973 0.898 0.978 0.952 0.975 0.969 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
13. T28D9.10 snr-3 9995 7.576 0.944 0.915 0.950 0.915 0.971 0.944 0.980 0.957 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
14. Y50D7A.9 taco-1 5949 7.576 0.955 0.919 0.934 0.919 0.966 0.967 0.965 0.951 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
15. D2023.5 mpst-1 10328 7.557 0.966 0.905 0.952 0.905 0.960 0.949 0.989 0.931 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
16. B0464.7 baf-1 10161 7.557 0.942 0.943 0.924 0.943 0.964 0.978 0.918 0.945 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
17. F58B3.5 mars-1 6729 7.556 0.935 0.921 0.968 0.921 0.951 0.970 0.963 0.927 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
18. T06A10.4 lsy-13 7631 7.555 0.943 0.930 0.942 0.930 0.965 0.960 0.957 0.928
19. Y18D10A.25 fkb-8 8968 7.555 0.959 0.914 0.939 0.914 0.984 0.959 0.935 0.951 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
20. K08F11.3 cif-1 10218 7.552 0.958 0.937 0.954 0.937 0.955 0.947 0.906 0.958 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
21. Y73B6BL.32 lsm-8 11002 7.55 0.961 0.916 0.953 0.916 0.948 0.983 0.967 0.906 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
22. T03D8.2 mrps-12 8253 7.548 0.938 0.919 0.966 0.919 0.928 0.973 0.974 0.931 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
23. T09A5.7 T09A5.7 5907 7.545 0.972 0.930 0.949 0.930 0.965 0.943 0.882 0.974
24. B0261.4 mrpl-47 8210 7.544 0.943 0.923 0.956 0.923 0.974 0.959 0.940 0.926 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
25. K08F4.2 gtbp-1 25222 7.543 0.920 0.936 0.936 0.936 0.963 0.919 0.980 0.953 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
26. H20J04.5 pfd-2 8082 7.541 0.942 0.933 0.944 0.933 0.976 0.976 0.934 0.903 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
27. C14A4.14 mrps-22 7966 7.539 0.969 0.937 0.957 0.937 0.956 0.932 0.924 0.927 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
28. B0205.11 mrpl-9 9162 7.539 0.949 0.898 0.968 0.898 0.974 0.984 0.957 0.911 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
29. Y54E5A.6 Y54E5A.6 770 7.539 0.953 0.947 0.932 0.947 0.942 0.965 0.933 0.920
30. Y40G12A.1 ubh-3 4142 7.537 0.941 0.930 0.955 0.930 0.945 0.962 0.959 0.915 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
31. W01G7.3 rpb-11 7826 7.537 0.918 0.939 0.901 0.939 0.971 0.966 0.936 0.967 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
32. C47B2.9 C47B2.9 4096 7.535 0.946 0.884 0.951 0.884 0.971 0.977 0.979 0.943
33. Y37D8A.18 mrps-10 4551 7.531 0.947 0.893 0.948 0.893 0.983 0.965 0.963 0.939 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
34. C06A1.5 rpb-6 7515 7.521 0.923 0.928 0.952 0.928 0.965 0.938 0.962 0.925 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
35. R12E2.12 mrps-6 4708 7.52 0.926 0.903 0.929 0.903 0.973 0.955 0.984 0.947 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_491318]
36. T06D8.5 cox-15 3892 7.519 0.893 0.923 0.943 0.923 0.966 0.969 0.971 0.931 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
37. F13G3.11 mrpl-13 6024 7.515 0.945 0.934 0.927 0.934 0.946 0.944 0.964 0.921 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
38. C05D11.10 mrps-17 4613 7.513 0.960 0.894 0.942 0.894 0.948 0.962 0.960 0.953 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
39. Y116A8C.42 snr-1 17062 7.512 0.953 0.921 0.923 0.921 0.950 0.946 0.980 0.918 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
40. F56D12.5 vig-1 42594 7.508 0.960 0.930 0.925 0.930 0.959 0.923 0.924 0.957 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
41. F58D5.1 hrp-2 17211 7.508 0.936 0.919 0.930 0.919 0.970 0.947 0.929 0.958 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
42. W08E3.1 snr-2 14849 7.507 0.941 0.922 0.935 0.922 0.933 0.954 0.982 0.918 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
43. F22B5.9 fars-3 7209 7.5 0.956 0.903 0.940 0.903 0.955 0.954 0.950 0.939 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
44. T21B10.1 mrpl-50 14595 7.497 0.914 0.946 0.947 0.946 0.958 0.948 0.953 0.885 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
45. C47E12.1 sars-1 4942 7.495 0.922 0.938 0.935 0.938 0.975 0.974 0.910 0.903 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
46. F55H2.6 clu-1 21404 7.49 0.933 0.910 0.941 0.910 0.943 0.946 0.951 0.956 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
47. C34E10.5 prmt-5 12277 7.487 0.938 0.940 0.952 0.940 0.940 0.943 0.889 0.945 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
48. D2013.7 eif-3.F 21004 7.486 0.954 0.916 0.936 0.916 0.942 0.950 0.913 0.959 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
49. C52E4.3 snr-4 19308 7.485 0.951 0.939 0.938 0.939 0.961 0.946 0.904 0.907 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
50. ZC410.2 mppb-1 3991 7.484 0.915 0.905 0.931 0.905 0.949 0.960 0.986 0.933 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
51. ZK863.6 dpy-30 16177 7.483 0.898 0.902 0.956 0.902 0.972 0.959 0.970 0.924 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
52. K08D10.4 rnp-2 2338 7.482 0.916 0.916 0.943 0.916 0.976 0.959 0.957 0.899 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500504]
53. Y37E3.15 npp-13 7250 7.481 0.889 0.923 0.950 0.923 0.953 0.955 0.933 0.955 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
54. Y56A3A.11 tsen-2 3247 7.48 0.932 0.918 0.904 0.918 0.960 0.960 0.959 0.929 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_499543]
55. C56C10.8 icd-1 89788 7.48 0.913 0.921 0.941 0.921 0.921 0.922 0.965 0.976 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
56. F26F4.11 rpb-8 7601 7.478 0.933 0.926 0.932 0.926 0.960 0.946 0.931 0.924 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
57. T12G3.5 mrpl-51 5192 7.478 0.931 0.906 0.905 0.906 0.925 0.967 0.980 0.958 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
58. Y54E10BR.5 Y54E10BR.5 10734 7.478 0.920 0.934 0.950 0.934 0.968 0.949 0.959 0.864 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]
59. F58E10.3 ddx-17 15107 7.477 0.877 0.939 0.942 0.939 0.941 0.936 0.950 0.953 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
60. F28H1.3 aars-2 13537 7.477 0.893 0.923 0.927 0.923 0.972 0.977 0.937 0.925 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
61. T08B2.9 fars-1 12650 7.476 0.950 0.913 0.931 0.913 0.969 0.952 0.926 0.922 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
62. T16G1.11 eif-3.K 14014 7.475 0.953 0.912 0.929 0.912 0.934 0.970 0.903 0.962 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
63. C26D10.1 ran-3 11111 7.474 0.881 0.953 0.962 0.953 0.955 0.944 0.956 0.870 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
64. Y73B6BL.3 exos-2 2624 7.473 0.916 0.927 0.922 0.927 0.934 0.911 0.971 0.965 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
65. Y56A3A.19 Y56A3A.19 9680 7.473 0.961 0.858 0.957 0.858 0.961 0.973 0.965 0.940 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
66. C26D10.2 hel-1 28697 7.471 0.941 0.927 0.949 0.927 0.929 0.944 0.889 0.965 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
67. T21C9.12 scpl-4 14723 7.47 0.928 0.944 0.936 0.944 0.953 0.947 0.865 0.953 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
68. T25D3.2 mrpl-28 4649 7.469 0.921 0.912 0.939 0.912 0.952 0.940 0.923 0.970 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
69. Y53C12B.2 Y53C12B.2 6115 7.466 0.951 0.936 0.950 0.936 0.887 0.903 0.952 0.951 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
70. F29C12.4 gfm-1 8964 7.465 0.898 0.945 0.903 0.945 0.972 0.977 0.892 0.933 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
71. T12E12.2 cec-6 4758 7.465 0.912 0.917 0.937 0.917 0.978 0.952 0.969 0.883 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
72. Y40B1B.5 eif-3.J 15061 7.465 0.943 0.940 0.958 0.940 0.911 0.942 0.880 0.951 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
73. DY3.1 tin-13 5225 7.464 0.952 0.935 0.896 0.935 0.943 0.929 0.914 0.960 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
74. C08F8.1 pfd-1 10199 7.463 0.962 0.904 0.921 0.904 0.943 0.974 0.957 0.898 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
75. Y39G10AR.20 tbca-1 4155 7.461 0.909 0.942 0.916 0.942 0.956 0.916 0.958 0.922 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
76. F43C1.6 mrpl-21 2778 7.461 0.950 0.898 0.955 0.898 0.974 0.927 0.934 0.925 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
77. C15H11.9 rrbs-1 9177 7.461 0.910 0.918 0.962 0.918 0.924 0.927 0.954 0.948 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
78. C18E9.6 tomm-40 13426 7.459 0.960 0.917 0.900 0.917 0.925 0.966 0.914 0.960 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
79. Y77E11A.6 rpc-11 2203 7.458 0.965 0.918 0.919 0.918 0.928 0.907 0.953 0.950 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
80. F25H5.6 mrpl-54 2630 7.457 0.921 0.926 0.927 0.926 0.973 0.954 0.937 0.893 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492455]
81. F25H2.11 tct-1 41796 7.456 0.953 0.907 0.918 0.907 0.949 0.955 0.944 0.923 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
82. F33D4.8 mrps-24 2853 7.456 0.912 0.913 0.916 0.913 0.951 0.970 0.965 0.916 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
83. D2096.8 nap-1 59459 7.454 0.940 0.911 0.947 0.911 0.925 0.897 0.974 0.949 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
84. F56B3.8 mrpl-2 3195 7.454 0.926 0.912 0.930 0.912 0.961 0.964 0.938 0.911 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
85. K01G5.4 ran-1 32379 7.452 0.895 0.910 0.897 0.910 0.964 0.955 0.963 0.958 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
86. T13H5.5 mrps-18B 3430 7.452 0.910 0.929 0.922 0.929 0.938 0.977 0.928 0.919 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
87. C14A4.10 taf-13 2719 7.452 0.959 0.874 0.905 0.874 0.978 0.951 0.955 0.956 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_496289]
88. C49H3.4 C49H3.4 648 7.451 0.961 0.887 0.906 0.887 0.963 0.934 0.964 0.949
89. K11H3.6 mrpl-36 7328 7.45 0.921 0.925 0.880 0.925 0.939 0.953 0.972 0.935 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
90. T17E9.2 nmt-1 8017 7.449 0.951 0.930 0.946 0.930 0.926 0.956 0.872 0.938 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
91. Y54H5A.2 Y54H5A.2 2168 7.448 0.931 0.883 0.958 0.883 0.925 0.920 0.980 0.968
92. T01C3.7 fib-1 23572 7.447 0.923 0.929 0.960 0.929 0.913 0.881 0.965 0.947 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
93. Y53C12B.3 nos-3 20231 7.447 0.918 0.922 0.938 0.922 0.937 0.907 0.951 0.952 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
94. Y23H5B.6 Y23H5B.6 5886 7.447 0.929 0.928 0.916 0.928 0.923 0.925 0.946 0.952
95. B0464.1 dars-1 12331 7.446 0.961 0.929 0.932 0.929 0.951 0.908 0.908 0.928 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
96. R151.9 pfd-5 6951 7.446 0.937 0.883 0.927 0.883 0.978 0.973 0.931 0.934 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
97. R13A5.12 lpd-7 10476 7.446 0.936 0.890 0.947 0.890 0.948 0.929 0.964 0.942 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
98. H21P03.1 mbf-1 25586 7.446 0.964 0.897 0.948 0.897 0.955 0.961 0.912 0.912 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
99. Y37D8A.11 cec-7 8801 7.444 0.922 0.921 0.933 0.921 0.941 0.891 0.970 0.945 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
100. R07E5.14 rnp-4 11659 7.444 0.911 0.890 0.895 0.890 0.957 0.967 0.980 0.954 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]

There are 1140 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA