C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for Y49A3A.5

Gene ID Gene Name Reads Transcripts Annotation
Y49A3A.5 cyn-1 6411 Y49A3A.5 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]

Genes with expression patterns similar to Y49A3A.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y49A3A.5 cyn-1 6411 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
2. T01E8.6 mrps-14 9328 7.731 0.951 0.952 0.965 0.952 0.983 0.966 0.978 0.984 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
3. Y50D7A.9 taco-1 5949 7.716 0.934 0.962 0.951 0.962 0.991 0.972 0.959 0.985 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
4. F54B3.3 atad-3 9583 7.713 0.948 0.953 0.981 0.953 0.972 0.973 0.941 0.992 ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
5. T28D9.10 snr-3 9995 7.71 0.967 0.954 0.949 0.954 0.987 0.963 0.952 0.984 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
6. Y116A8C.42 snr-1 17062 7.701 0.966 0.955 0.932 0.955 0.977 0.973 0.968 0.975 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
7. B0205.11 mrpl-9 9162 7.689 0.952 0.971 0.928 0.971 0.986 0.971 0.958 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
8. F22B5.9 fars-3 7209 7.685 0.953 0.945 0.962 0.945 0.981 0.962 0.968 0.969 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
9. B0303.15 mrpl-11 9889 7.68 0.973 0.952 0.938 0.952 0.981 0.948 0.972 0.964 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
10. T17E9.2 nmt-1 8017 7.678 0.976 0.970 0.961 0.970 0.945 0.957 0.928 0.971 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
11. F28H1.3 aars-2 13537 7.675 0.932 0.949 0.938 0.949 0.992 0.977 0.968 0.970 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
12. C18E9.6 tomm-40 13426 7.673 0.976 0.959 0.974 0.959 0.951 0.965 0.929 0.960 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
13. T08B2.9 fars-1 12650 7.672 0.957 0.971 0.972 0.971 0.969 0.949 0.940 0.943 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
14. T02G5.9 kars-1 9763 7.665 0.948 0.960 0.928 0.960 0.977 0.973 0.942 0.977 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
15. K08F4.2 gtbp-1 25222 7.664 0.962 0.958 0.947 0.958 0.975 0.939 0.937 0.988 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
16. Y71F9B.4 snr-7 13542 7.664 0.979 0.951 0.935 0.951 0.958 0.961 0.954 0.975 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
17. C14A4.14 mrps-22 7966 7.662 0.953 0.959 0.928 0.959 0.984 0.943 0.945 0.991 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
18. ZK652.1 snr-5 5993 7.66 0.974 0.945 0.923 0.945 0.964 0.972 0.956 0.981 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
19. T16G1.11 eif-3.K 14014 7.652 0.949 0.952 0.955 0.952 0.961 0.971 0.939 0.973 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
20. F26F4.11 rpb-8 7601 7.651 0.962 0.933 0.915 0.933 0.980 0.974 0.979 0.975 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
21. C08B6.9 aos-1 3892 7.649 0.912 0.959 0.940 0.959 0.991 0.978 0.969 0.941 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
22. D2023.5 mpst-1 10328 7.649 0.956 0.957 0.962 0.957 0.970 0.972 0.930 0.945 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
23. R07E5.14 rnp-4 11659 7.647 0.925 0.961 0.920 0.961 0.972 0.978 0.951 0.979 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
24. W06H3.3 ctps-1 8363 7.643 0.973 0.911 0.930 0.911 0.979 0.977 0.986 0.976 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
25. Y54E5A.6 Y54E5A.6 770 7.642 0.945 0.931 0.942 0.931 0.974 0.978 0.970 0.971
26. F56F3.1 ifet-1 25772 7.641 0.932 0.965 0.920 0.965 0.961 0.966 0.957 0.975 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
27. C08B11.5 sap-49 10553 7.639 0.942 0.944 0.955 0.944 0.972 0.969 0.941 0.972 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
28. Y73B6BL.32 lsm-8 11002 7.637 0.954 0.947 0.925 0.947 0.971 0.988 0.941 0.964 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
29. Y37E3.9 phb-1 29211 7.636 0.982 0.934 0.947 0.934 0.978 0.964 0.934 0.963 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
30. C26E6.4 rpb-2 7053 7.634 0.913 0.960 0.939 0.960 0.976 0.964 0.954 0.968 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
31. T24H7.1 phb-2 28775 7.63 0.956 0.937 0.920 0.937 0.974 0.986 0.951 0.969 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
32. W04B5.4 mrpl-30 4938 7.626 0.945 0.946 0.948 0.946 0.980 0.967 0.945 0.949 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497550]
33. C05D11.10 mrps-17 4613 7.626 0.972 0.922 0.913 0.922 0.972 0.977 0.969 0.979 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
34. Y57G11C.34 mrps-7 3450 7.623 0.949 0.939 0.963 0.939 0.985 0.961 0.952 0.935 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
35. F33D4.5 mrpl-1 5337 7.622 0.913 0.966 0.916 0.966 0.971 0.977 0.933 0.980 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
36. ZK550.4 ZK550.4 5815 7.62 0.938 0.924 0.967 0.924 0.990 0.963 0.962 0.952 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
37. W08E3.3 ola-1 20885 7.62 0.957 0.931 0.961 0.931 0.983 0.958 0.967 0.932 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
38. T06A10.4 lsy-13 7631 7.619 0.961 0.954 0.926 0.954 0.977 0.974 0.937 0.936
39. T04A8.11 mrpl-16 5998 7.613 0.946 0.959 0.924 0.959 0.991 0.959 0.938 0.937 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
40. T05H4.6 erfa-1 12542 7.612 0.949 0.972 0.956 0.972 0.938 0.961 0.937 0.927 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
41. W08E3.1 snr-2 14849 7.612 0.930 0.952 0.938 0.952 0.926 0.984 0.962 0.968 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
42. C47E12.1 sars-1 4942 7.611 0.922 0.968 0.943 0.968 0.984 0.960 0.942 0.924 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
43. Y53C12B.3 nos-3 20231 7.61 0.925 0.961 0.924 0.961 0.965 0.921 0.965 0.988 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
44. H27M09.2 rpb-5 4744 7.608 0.935 0.945 0.932 0.945 0.940 0.960 0.966 0.985 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
45. C06A1.5 rpb-6 7515 7.607 0.935 0.947 0.911 0.947 0.974 0.970 0.956 0.967 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
46. Y34D9A.1 mrpl-38 5291 7.606 0.928 0.970 0.923 0.970 0.964 0.967 0.932 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
47. F59E12.11 sam-4 8179 7.605 0.909 0.945 0.909 0.945 0.980 0.975 0.980 0.962
48. ZK1098.7 mrps-23 2365 7.6 0.940 0.965 0.899 0.965 0.981 0.955 0.925 0.970 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]
49. T21C9.12 scpl-4 14723 7.599 0.961 0.942 0.946 0.942 0.968 0.962 0.923 0.955 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
50. F56B3.8 mrpl-2 3195 7.599 0.922 0.927 0.923 0.927 0.984 0.977 0.967 0.972 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
51. C26D10.2 hel-1 28697 7.599 0.968 0.933 0.955 0.933 0.948 0.965 0.910 0.987 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
52. T10B5.5 cct-7 24616 7.596 0.921 0.955 0.933 0.955 0.963 0.950 0.964 0.955 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
53. K08F11.3 cif-1 10218 7.595 0.951 0.942 0.939 0.942 0.970 0.945 0.937 0.969 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
54. Y18D10A.25 fkb-8 8968 7.594 0.974 0.908 0.930 0.908 0.982 0.973 0.950 0.969 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
55. PAR2.1 mtss-1 4055 7.593 0.960 0.921 0.945 0.921 0.977 0.936 0.954 0.979 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
56. Y62E10A.11 mdt-9 5971 7.593 0.955 0.943 0.906 0.943 0.963 0.982 0.958 0.943 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
57. C47B2.9 C47B2.9 4096 7.592 0.967 0.914 0.949 0.914 0.982 0.990 0.931 0.945
58. F43C1.6 mrpl-21 2778 7.588 0.950 0.963 0.904 0.963 0.985 0.940 0.938 0.945 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022585]
59. ZK863.6 dpy-30 16177 7.586 0.924 0.955 0.939 0.955 0.977 0.942 0.935 0.959 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
60. T06D8.5 cox-15 3892 7.586 0.931 0.932 0.920 0.932 0.983 0.972 0.948 0.968 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
61. F58D5.1 hrp-2 17211 7.586 0.919 0.946 0.937 0.946 0.981 0.950 0.938 0.969 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
62. F56D12.5 vig-1 42594 7.584 0.954 0.923 0.929 0.923 0.977 0.943 0.953 0.982 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
63. ZK1058.4 ccdc-47 8879 7.582 0.914 0.955 0.950 0.955 0.957 0.967 0.932 0.952 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
64. F29C12.4 gfm-1 8964 7.581 0.934 0.920 0.967 0.920 0.986 0.967 0.924 0.963 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
65. C27H5.3 fust-1 6978 7.581 0.939 0.925 0.928 0.925 0.963 0.976 0.961 0.964 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
66. F13G3.4 dylt-1 21345 7.581 0.974 0.946 0.942 0.946 0.971 0.939 0.904 0.959 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
67. B0261.4 mrpl-47 8210 7.578 0.964 0.924 0.919 0.924 0.990 0.964 0.939 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
68. F59A2.3 cri-3 15077 7.578 0.974 0.901 0.917 0.901 0.985 0.975 0.939 0.986 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
69. T13H5.5 mrps-18B 3430 7.578 0.946 0.917 0.965 0.917 0.971 0.982 0.918 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
70. Y56A3A.19 Y56A3A.19 9680 7.576 0.949 0.939 0.844 0.939 0.974 0.982 0.976 0.973 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
71. F10G7.1 tag-151 9031 7.576 0.885 0.948 0.954 0.948 0.967 0.962 0.966 0.946 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
72. F56D2.6 ddx-15 12282 7.575 0.871 0.961 0.932 0.961 0.975 0.959 0.927 0.989 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
73. Y54E5A.4 npp-4 6288 7.574 0.925 0.940 0.906 0.940 0.973 0.948 0.966 0.976 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
74. T19B4.2 npp-7 13073 7.574 0.918 0.955 0.927 0.955 0.965 0.957 0.932 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
75. T11G6.1 hars-1 7908 7.574 0.946 0.958 0.949 0.958 0.968 0.960 0.903 0.932 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
76. D2013.7 eif-3.F 21004 7.573 0.976 0.950 0.952 0.950 0.952 0.948 0.891 0.954 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
77. T12G3.5 mrpl-51 5192 7.573 0.952 0.939 0.914 0.939 0.942 0.975 0.933 0.979 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
78. T09A5.7 T09A5.7 5907 7.572 0.941 0.929 0.935 0.929 0.964 0.952 0.940 0.982
79. K11H3.6 mrpl-36 7328 7.569 0.882 0.948 0.941 0.948 0.966 0.976 0.966 0.942 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
80. H21P03.1 mbf-1 25586 7.567 0.961 0.957 0.944 0.957 0.958 0.942 0.926 0.922 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
81. K11D12.2 pqn-51 15951 7.565 0.931 0.953 0.924 0.953 0.961 0.939 0.955 0.949 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
82. T21B10.1 mrpl-50 14595 7.565 0.941 0.957 0.943 0.957 0.962 0.958 0.947 0.900 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
83. C27H6.3 tofu-1 2992 7.565 0.923 0.946 0.919 0.946 0.960 0.964 0.969 0.938 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
84. Y65B4BR.5 icd-2 58321 7.564 0.973 0.943 0.947 0.943 0.938 0.939 0.927 0.954 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
85. Y40B1B.8 Y40B1B.8 4877 7.564 0.956 0.937 0.896 0.937 0.953 0.969 0.958 0.958
86. T03F6.5 lis-1 8818 7.562 0.961 0.964 0.917 0.964 0.982 0.911 0.937 0.926 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
87. C30C11.1 mrpl-32 5238 7.562 0.925 0.914 0.924 0.914 0.983 0.984 0.961 0.957 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
88. Y97E10AR.5 rpb-9 3598 7.561 0.911 0.929 0.934 0.929 0.977 0.953 0.955 0.973 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
89. R11D1.9 mrpl-49 2191 7.561 0.965 0.911 0.890 0.911 0.982 0.967 0.959 0.976 Probable 39S ribosomal protein L49, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q21939]
90. F58E10.3 ddx-17 15107 7.56 0.900 0.953 0.910 0.953 0.968 0.953 0.944 0.979 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
91. F55H2.6 clu-1 21404 7.56 0.914 0.931 0.927 0.931 0.972 0.962 0.950 0.973 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
92. C33H5.12 rsp-6 23342 7.557 0.894 0.954 0.914 0.954 0.973 0.967 0.924 0.977 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
93. Y23H5B.6 Y23H5B.6 5886 7.556 0.918 0.948 0.871 0.948 0.960 0.957 0.962 0.992
94. W06E11.4 sbds-1 6701 7.554 0.910 0.962 0.908 0.962 0.953 0.959 0.975 0.925 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
95. F53F4.12 F53F4.12 2683 7.554 0.939 0.927 0.934 0.927 0.947 0.952 0.947 0.981
96. T25G3.4 T25G3.4 9394 7.553 0.917 0.941 0.944 0.941 0.961 0.977 0.927 0.945 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
97. F42A6.7 hrp-1 28201 7.552 0.929 0.930 0.935 0.930 0.977 0.927 0.945 0.979 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
98. F22D6.3 nars-1 18624 7.552 0.922 0.965 0.898 0.965 0.965 0.975 0.886 0.976 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
99. C34E10.5 prmt-5 12277 7.551 0.928 0.953 0.928 0.953 0.965 0.947 0.933 0.944 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
100. R151.9 pfd-5 6951 7.551 0.955 0.928 0.898 0.928 0.979 0.962 0.959 0.942 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]

There are 1968 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA