C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y37E3.3

Gene ID Gene Name Reads Transcripts Annotation
Y37E3.3 rpb-10 4051 Y37E3.3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]

Genes with expression patterns similar to Y37E3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y37E3.3 rpb-10 4051 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
2. Y116A8C.42 snr-1 17062 7.757 0.974 0.956 0.939 0.956 0.987 0.991 0.985 0.969 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
3. Y37D8A.9 mrg-1 14369 7.753 0.945 0.956 0.972 0.956 0.980 0.991 0.985 0.968 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
4. Y54E5A.6 Y54E5A.6 770 7.728 0.957 0.955 0.940 0.955 0.975 0.990 0.979 0.977
5. W06H3.3 ctps-1 8363 7.725 0.963 0.967 0.926 0.967 0.974 0.985 0.979 0.964 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
6. T23H2.1 npp-12 12425 7.723 0.977 0.960 0.968 0.960 0.976 0.986 0.946 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
7. Y62E10A.11 mdt-9 5971 7.714 0.983 0.969 0.928 0.969 0.974 0.985 0.952 0.954 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
8. K01G5.4 ran-1 32379 7.708 0.961 0.966 0.959 0.966 0.972 0.979 0.950 0.955 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
9. R07E5.14 rnp-4 11659 7.703 0.964 0.932 0.967 0.932 0.985 0.981 0.978 0.964 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
10. T28D9.2 rsp-5 6460 7.693 0.968 0.951 0.946 0.951 0.985 0.964 0.962 0.966 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
11. C34E10.2 gop-2 5684 7.692 0.969 0.969 0.929 0.969 0.983 0.943 0.976 0.954 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
12. Y23H5B.6 Y23H5B.6 5886 7.685 0.962 0.945 0.954 0.945 0.963 0.968 0.980 0.968
13. T10B5.5 cct-7 24616 7.684 0.958 0.963 0.952 0.963 0.970 0.956 0.967 0.955 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
14. F28H1.3 aars-2 13537 7.683 0.958 0.955 0.954 0.955 0.981 0.976 0.947 0.957 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
15. K08F4.2 gtbp-1 25222 7.682 0.972 0.945 0.938 0.945 0.985 0.961 0.960 0.976 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
16. Y71G12B.9 lin-65 7476 7.682 0.933 0.950 0.959 0.950 0.978 0.983 0.962 0.967 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
17. Y14H12B.2 Y14H12B.2 6496 7.681 0.957 0.958 0.968 0.958 0.953 0.959 0.961 0.967
18. Y53C12B.3 nos-3 20231 7.679 0.962 0.952 0.935 0.952 0.968 0.950 0.983 0.977 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
19. T28D9.10 snr-3 9995 7.678 0.980 0.952 0.886 0.952 0.989 0.980 0.983 0.956 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
20. D2030.8 D2030.8 2645 7.675 0.950 0.957 0.950 0.957 0.961 0.967 0.952 0.981
21. W06E11.4 sbds-1 6701 7.674 0.959 0.958 0.932 0.958 0.975 0.976 0.973 0.943 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
22. W08E3.1 snr-2 14849 7.672 0.962 0.941 0.945 0.941 0.948 0.989 0.974 0.972 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
23. F53F10.5 npp-11 3378 7.671 0.951 0.959 0.954 0.959 0.967 0.972 0.945 0.964 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
24. T01E8.6 mrps-14 9328 7.67 0.970 0.965 0.900 0.965 0.977 0.970 0.963 0.960 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
25. C25A1.4 C25A1.4 15507 7.67 0.949 0.975 0.964 0.975 0.982 0.944 0.978 0.903
26. F26F4.11 rpb-8 7601 7.668 0.961 0.949 0.935 0.949 0.975 0.974 0.958 0.967 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
27. F32H2.1 snpc-4 7581 7.664 0.973 0.943 0.948 0.943 0.975 0.977 0.961 0.944 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
28. K12C11.2 smo-1 12784 7.662 0.973 0.966 0.937 0.966 0.972 0.955 0.953 0.940 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
29. B0414.3 hil-5 10816 7.662 0.934 0.968 0.957 0.968 0.987 0.957 0.945 0.946 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
30. Y55F3AM.12 dcap-1 8679 7.662 0.962 0.950 0.960 0.950 0.978 0.979 0.955 0.928 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
31. Y41D4B.19 npp-8 12992 7.662 0.941 0.957 0.961 0.957 0.966 0.964 0.973 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
32. C48B4.11 C48B4.11 4384 7.661 0.977 0.951 0.967 0.951 0.967 0.968 0.950 0.930
33. C06A1.5 rpb-6 7515 7.66 0.977 0.934 0.920 0.934 0.994 0.972 0.962 0.967 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
34. F59A2.1 npp-9 34375 7.659 0.963 0.923 0.963 0.923 0.971 0.977 0.977 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
35. Y71F9B.4 snr-7 13542 7.655 0.970 0.927 0.946 0.927 0.978 0.976 0.968 0.963 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
36. R53.2 dtmk-1 6821 7.654 0.935 0.956 0.935 0.956 0.986 0.979 0.918 0.989 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
37. F26B1.3 ima-2 18826 7.654 0.920 0.944 0.970 0.944 0.968 0.977 0.962 0.969 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
38. K08E7.1 eak-7 18960 7.653 0.949 0.952 0.969 0.952 0.963 0.949 0.963 0.956 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
39. F23F1.1 nfyc-1 9983 7.652 0.973 0.950 0.954 0.950 0.980 0.977 0.934 0.934 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
40. Y37D8A.11 cec-7 8801 7.652 0.964 0.967 0.957 0.967 0.981 0.954 0.967 0.895 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
41. W01G7.3 rpb-11 7826 7.65 0.953 0.970 0.956 0.970 0.960 0.983 0.957 0.901 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
42. Y54E5A.4 npp-4 6288 7.647 0.966 0.943 0.977 0.943 0.971 0.952 0.941 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
43. F58E10.3 ddx-17 15107 7.646 0.961 0.949 0.950 0.949 0.974 0.963 0.950 0.950 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
44. Y18D10A.16 Y18D10A.16 2881 7.644 0.962 0.915 0.953 0.915 0.978 0.969 0.980 0.972
45. C26D10.1 ran-3 11111 7.643 0.931 0.963 0.906 0.963 0.967 0.986 0.960 0.967 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
46. T21B10.7 cct-2 13999 7.642 0.968 0.960 0.941 0.960 0.968 0.961 0.957 0.927 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
47. ZK742.1 xpo-1 20741 7.641 0.926 0.951 0.963 0.951 0.973 0.971 0.944 0.962 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
48. F56D2.6 ddx-15 12282 7.638 0.951 0.947 0.962 0.947 0.972 0.977 0.906 0.976 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
49. Y17G7A.1 hmg-12 29989 7.638 0.971 0.954 0.956 0.954 0.964 0.981 0.925 0.933 HMG [Source:RefSeq peptide;Acc:NP_496544]
50. R09B3.5 mag-1 7496 7.638 0.974 0.946 0.938 0.946 0.975 0.976 0.940 0.943 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
51. R06F6.1 cdl-1 14167 7.636 0.885 0.939 0.971 0.939 0.975 0.962 0.982 0.983 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
52. Y73B6BL.32 lsm-8 11002 7.633 0.974 0.947 0.912 0.947 0.979 0.977 0.941 0.956 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
53. F21C3.4 rde-2 6286 7.629 0.966 0.947 0.933 0.947 0.958 0.972 0.946 0.960
54. C26E6.4 rpb-2 7053 7.627 0.973 0.951 0.941 0.951 0.972 0.972 0.930 0.937 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
55. B0464.7 baf-1 10161 7.626 0.957 0.972 0.871 0.972 0.978 0.966 0.948 0.962 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
56. T25G3.4 T25G3.4 9394 7.623 0.965 0.939 0.924 0.939 0.975 0.991 0.956 0.934 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
57. ZK652.1 snr-5 5993 7.622 0.956 0.949 0.939 0.949 0.956 0.975 0.948 0.950 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
58. F10E9.7 F10E9.7 1842 7.621 0.967 0.935 0.933 0.935 0.972 0.952 0.969 0.958
59. K01G5.2 hpl-2 6781 7.62 0.954 0.946 0.936 0.946 0.975 0.983 0.918 0.962 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
60. F32A5.7 lsm-4 3785 7.619 0.964 0.926 0.960 0.926 0.978 0.967 0.956 0.942 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
61. H20J04.8 mog-2 3084 7.618 0.976 0.938 0.912 0.938 0.944 0.976 0.953 0.981 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
62. B0261.4 mrpl-47 8210 7.616 0.953 0.955 0.923 0.955 0.971 0.976 0.943 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
63. K02F2.4 ulp-5 3433 7.616 0.966 0.933 0.951 0.933 0.977 0.973 0.929 0.954 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
64. T19B4.2 npp-7 13073 7.615 0.964 0.948 0.956 0.948 0.961 0.956 0.944 0.938 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
65. F58F6.4 rfc-2 2074 7.613 0.913 0.946 0.963 0.946 0.993 0.975 0.904 0.973 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
66. F43G9.5 cfim-1 9169 7.613 0.949 0.919 0.967 0.919 0.966 0.976 0.955 0.962 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
67. T04A8.11 mrpl-16 5998 7.613 0.962 0.943 0.950 0.943 0.979 0.974 0.908 0.954 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
68. F53F4.3 tbcb-1 6442 7.612 0.961 0.942 0.972 0.942 0.975 0.929 0.942 0.949 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
69. F14B4.3 rpoa-2 7549 7.612 0.916 0.964 0.929 0.964 0.965 0.969 0.953 0.952 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
70. C08B11.2 hda-2 2313 7.612 0.937 0.977 0.931 0.977 0.976 0.959 0.928 0.927 Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
71. ZK328.2 eftu-2 7040 7.611 0.927 0.964 0.937 0.964 0.985 0.953 0.905 0.976 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
72. F59E12.11 sam-4 8179 7.609 0.933 0.925 0.952 0.925 0.974 0.984 0.957 0.959
73. Y37E3.15 npp-13 7250 7.609 0.962 0.943 0.922 0.943 0.979 0.967 0.952 0.941 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
74. ZK1128.6 ttll-4 6059 7.608 0.937 0.945 0.961 0.945 0.972 0.948 0.942 0.958 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
75. Y73B6BL.33 hrpf-2 4443 7.607 0.937 0.950 0.939 0.950 0.975 0.947 0.951 0.958 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
76. C08B11.5 sap-49 10553 7.607 0.961 0.946 0.934 0.946 0.956 0.968 0.924 0.972 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
77. C16A11.3 C16A11.3 3250 7.607 0.976 0.958 0.927 0.958 0.964 0.933 0.931 0.960
78. T21B10.1 mrpl-50 14595 7.607 0.976 0.965 0.927 0.965 0.957 0.971 0.948 0.898 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
79. C34D4.12 cyn-12 7363 7.606 0.955 0.955 0.930 0.955 0.979 0.959 0.951 0.922 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
80. C16C10.4 C16C10.4 3439 7.605 0.947 0.918 0.922 0.918 0.989 0.964 0.975 0.972 Probable histone deacetylase complex subunit SAP18 [Source:UniProtKB/Swiss-Prot;Acc:Q09250]
81. W02B12.3 rsp-1 9235 7.605 0.976 0.957 0.954 0.957 0.962 0.980 0.883 0.936 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
82. M18.5 ddb-1 3823 7.605 0.943 0.951 0.956 0.951 0.939 0.974 0.940 0.951 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
83. F10E7.6 F10E7.6 2788 7.604 0.956 0.929 0.955 0.929 0.955 0.945 0.966 0.969
84. T14B4.3 T14B4.3 2875 7.604 0.940 0.944 0.910 0.944 0.973 0.983 0.961 0.949
85. C23G10.8 C23G10.8 4642 7.604 0.944 0.952 0.955 0.952 0.950 0.914 0.975 0.962
86. F10G7.3 unc-85 5206 7.603 0.950 0.922 0.929 0.922 0.966 0.983 0.977 0.954 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
87. Y47D3A.26 smc-3 6256 7.603 0.922 0.951 0.955 0.951 0.964 0.931 0.961 0.968 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
88. K07A1.12 lin-53 15817 7.603 0.928 0.937 0.966 0.937 0.964 0.968 0.968 0.935 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
89. T10G3.6 gut-2 3374 7.601 0.943 0.935 0.951 0.935 0.957 0.974 0.950 0.956
90. K09H9.6 lpd-6 5459 7.6 0.955 0.928 0.953 0.928 0.962 0.961 0.954 0.959 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
91. Y39G10AR.7 ekl-7 7072 7.6 0.959 0.920 0.951 0.920 0.973 0.970 0.963 0.944
92. C26B2.6 elpc-4 3600 7.599 0.948 0.936 0.931 0.936 0.964 0.952 0.975 0.957 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
93. R53.6 psf-1 4721 7.596 0.924 0.955 0.932 0.955 0.984 0.984 0.942 0.920 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
94. Y87G2A.6 cyn-15 2566 7.596 0.921 0.945 0.956 0.945 0.960 0.981 0.939 0.949 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
95. D2023.5 mpst-1 10328 7.596 0.962 0.936 0.914 0.936 0.980 0.968 0.958 0.942 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
96. F53F4.12 F53F4.12 2683 7.596 0.961 0.917 0.944 0.917 0.974 0.964 0.962 0.957
97. C07E3.2 pro-2 4193 7.594 0.900 0.968 0.944 0.968 0.959 0.956 0.947 0.952 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
98. H27M09.2 rpb-5 4744 7.594 0.964 0.909 0.916 0.909 0.974 0.963 0.987 0.972 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
99. ZK1127.5 ZK1127.5 990 7.594 0.922 0.935 0.933 0.935 0.964 0.962 0.969 0.974 Probable RNA 3'-terminal phosphate cyclase-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q23400]
100. K02F3.11 rnp-5 6205 7.593 0.940 0.952 0.936 0.952 0.952 0.976 0.933 0.952 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]

There are 2267 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA